RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 CEP85Q6P2H3 762 aa17.67■□□□□ 0.42
SRSF6-202ENST00000483871 SIRT2Q8IXJ6 389 aa17.67■□□□□ 0.42
SRSF6-202ENST00000483871 SEC31BQ9NQW1 1179 aa17.67■□□□□ 0.42
SRSF6-202ENST00000483871 C10orf71Q711Q0 1435 aa17.66■□□□□ 0.42
SRSF6-202ENST00000483871 KLRG2A4D1S0 409 aaPredicted RBP17.66■□□□□ 0.42
SRSF6-202ENST00000483871 PDE6BP35913 854 aa17.66■□□□□ 0.42
SRSF6-202ENST00000483871 ATP8B2P98198 1209 aa17.66■□□□□ 0.42
SRSF6-202ENST00000483871 FAM161AQ3B820 660 aa17.66■□□□□ 0.42
SRSF6-202ENST00000483871 MYH3P11055 1940 aa17.66■□□□□ 0.42
SRSF6-202ENST00000483871 LAMB2P55268 1798 aa17.66■□□□□ 0.42
SRSF6-202ENST00000483871 CRY2Q49AN0 593 aa17.65■□□□□ 0.42
SRSF6-202ENST00000483871 CCDC152Q4G0S7 254 aa17.65■□□□□ 0.42
SRSF6-202ENST00000483871 RIC1Q4ADV7 1423 aa17.65■□□□□ 0.42
SRSF6-202ENST00000483871 A0A0G2JLW4 131 aa17.64■□□□□ 0.42
SRSF6-202ENST00000483871 SRGAP3O43295 1099 aa17.64■□□□□ 0.42
SRSF6-202ENST00000483871 SRGNP10124 158 aa17.64■□□□□ 0.42
SRSF6-202ENST00000483871 ITGA6P23229 1130 aa17.64■□□□□ 0.42
SRSF6-202ENST00000483871 C2CD5Q86YS7 1000 aa17.64■□□□□ 0.42
SRSF6-202ENST00000483871 KLHDC4Q8TBB5 520 aa17.64■□□□□ 0.42
SRSF6-202ENST00000483871 TAF1P21675 1872 aa17.64■□□□□ 0.41
SRSF6-202ENST00000483871 MTX1Q13505 466 aa17.64■□□□□ 0.41
SRSF6-202ENST00000483871 RPAP2Q8IXW5 612 aaPredicted RBP17.64■□□□□ 0.41
SRSF6-202ENST00000483871 ZNF594Q96JF6 807 aaPredicted RBP17.64■□□□□ 0.41
SRSF6-202ENST00000483871 H0YIN7 160 aa17.63■□□□□ 0.41
SRSF6-202ENST00000483871 CCDC57Q2TAC2 916 aa17.63■□□□□ 0.41
SRSF6-202ENST00000483871 RPGRQ92834 1020 aaKnown RBP17.63■□□□□ 0.41
SRSF6-202ENST00000483871 ZNF622Q969S3 477 aaKnown RBP eCLIP17.63■□□□□ 0.41
SRSF6-202ENST00000483871 FHDC1Q9C0D6 1143 aaPredicted RBP17.63■□□□□ 0.41
SRSF6-202ENST00000483871 DPEP1P16444 411 aa17.62■□□□□ 0.41
SRSF6-202ENST00000483871 KCNA3P22001 575 aa17.62■□□□□ 0.41
SRSF6-202ENST00000483871 RFX5P48382 616 aaPredicted RBP17.62■□□□□ 0.41
SRSF6-202ENST00000483871 IFIT5Q13325 482 aaKnown RBP17.62■□□□□ 0.41
SRSF6-202ENST00000483871 AAMPQ13685 434 aa17.62■□□□□ 0.41
SRSF6-202ENST00000483871 CELF1Q92879 486 aaKnown RBP17.62■□□□□ 0.41
SRSF6-202ENST00000483871 WWC3Q9ULE0 1092 aa17.62■□□□□ 0.41
SRSF6-202ENST00000483871 PA2G4Q9UQ80 394 aaKnown RBP17.62■□□□□ 0.41
SRSF6-202ENST00000483871 CD2APQ9Y5K6 639 aa17.62■□□□□ 0.41
SRSF6-202ENST00000483871 COL4A1P02462 1669 aa17.62■□□□□ 0.41
SRSF6-202ENST00000483871 DDX46Q7L014 1031 aaKnown RBP17.61■□□□□ 0.41
SRSF6-202ENST00000483871 NLGN2Q8NFZ4 835 aa17.61■□□□□ 0.41
SRSF6-202ENST00000483871 MASTLQ96GX5 879 aa17.61■□□□□ 0.41
SRSF6-202ENST00000483871 KIF13BQ9NQT8 1826 aa17.61■□□□□ 0.41
SRSF6-202ENST00000483871 ANKRD18BA2A2Z9 1011 aa17.61■□□□□ 0.41
SRSF6-202ENST00000483871 TGFB2P61812 414 aa17.61■□□□□ 0.41
SRSF6-202ENST00000483871 PTPN12Q05209 780 aaKnown RBP17.61■□□□□ 0.41
SRSF6-202ENST00000483871 POLA2Q14181 598 aa17.61■□□□□ 0.41
SRSF6-202ENST00000483871 SSH3Q8TE77 659 aa17.61■□□□□ 0.41
SRSF6-202ENST00000483871 COL11A2P13942 1736 aaPredicted RBP17.6■□□□□ 0.41
SRSF6-202ENST00000483871 UTRNP46939 3433 aa17.6■□□□□ 0.41
SRSF6-202ENST00000483871 NPR1P16066 1061 aa17.6■□□□□ 0.41
SRSF6-202ENST00000483871 HOXA10P31260 410 aaPredicted RBP17.6■□□□□ 0.41
SRSF6-202ENST00000483871 SLC51AQ86UW1 340 aa17.6■□□□□ 0.41
SRSF6-202ENST00000483871 RBM17Q96I25 401 aaKnown RBP17.6■□□□□ 0.41
SRSF6-202ENST00000483871 IGHDP01880 384 aa17.59■□□□□ 0.41
SRSF6-202ENST00000483871 SYT17Q9BSW7 474 aa17.59■□□□□ 0.41
SRSF6-202ENST00000483871 PUS3Q9BZE2 481 aaKnown RBP17.59■□□□□ 0.41
SRSF6-202ENST00000483871 SIL1Q9H173 461 aa17.59■□□□□ 0.41
SRSF6-202ENST00000483871 RPS8P62241 208 aaKnown RBP17.58■□□□□ 0.41
SRSF6-202ENST00000483871 GRAPQ13588 217 aa17.58■□□□□ 0.41
SRSF6-202ENST00000483871 TAF7LQ5H9L4 462 aa17.58■□□□□ 0.41
SRSF6-202ENST00000483871 GRAPLQ8TC17 118 aaPredicted RBP17.58■□□□□ 0.41
SRSF6-202ENST00000483871 CRAMP1Q96RY5 1269 aa17.58■□□□□ 0.41
SRSF6-202ENST00000483871 RTL9Q8NET4 1388 aa17.58■□□□□ 0.41
SRSF6-202ENST00000483871 LRRC24Q50LG9 513 aa17.58■□□□□ 0.4
SRSF6-202ENST00000483871 ANKRD18AQ8IVF6 992 aa17.58■□□□□ 0.4
SRSF6-202ENST00000483871 ALDH1B1P30837 517 aa17.57■□□□□ 0.4
SRSF6-202ENST00000483871 STYK1Q6J9G0 422 aa17.57■□□□□ 0.4
SRSF6-202ENST00000483871 CDC5LQ99459 802 aaKnown RBP17.57■□□□□ 0.4
SRSF6-202ENST00000483871 PDZRN3Q9UPQ7 1066 aa17.57■□□□□ 0.4
SRSF6-202ENST00000483871 KIAA1551Q9HCM1 1747 aa17.57■□□□□ 0.4
SRSF6-202ENST00000483871 HMMRO75330 724 aa17.56■□□□□ 0.4
SRSF6-202ENST00000483871 SURF6O75683 361 aaKnown RBP17.56■□□□□ 0.4
SRSF6-202ENST00000483871 IGHMBP2P38935 993 aaKnown RBP17.56■□□□□ 0.4
SRSF6-202ENST00000483871 LDHAL6AQ6ZMR3 332 aa17.56■□□□□ 0.4
SRSF6-202ENST00000483871 COPRSQ9NQ92 184 aa17.56■□□□□ 0.4
SRSF6-202ENST00000483871 OLFM4Q6UX06 510 aa17.55■□□□□ 0.4
SRSF6-202ENST00000483871 MPHOSPH8Q99549 860 aa17.55■□□□□ 0.4
SRSF6-202ENST00000483871 ZNF219Q9P2Y4 722 aaPredicted RBP17.55■□□□□ 0.4
SRSF6-202ENST00000483871 EXOC6BQ9Y2D4 811 aa17.55■□□□□ 0.4
SRSF6-202ENST00000483871 HDAC1Q13547 482 aaPredicted RBP17.55■□□□□ 0.4
SRSF6-202ENST00000483871 ERICH6BQ5W0A0 696 aa17.55■□□□□ 0.4
SRSF6-202ENST00000483871 PRPF40BQ6NWY9 871 aaKnown RBP17.55■□□□□ 0.4
SRSF6-202ENST00000483871 TTLL6Q8N841 843 aa17.55■□□□□ 0.4
SRSF6-202ENST00000483871 CNKSR1Q969H4 720 aa17.55■□□□□ 0.4
SRSF6-202ENST00000483871 CNNM1Q9NRU3 951 aa17.55■□□□□ 0.4
SRSF6-202ENST00000483871 PIM2Q9P1W9 311 aa17.55■□□□□ 0.4
SRSF6-202ENST00000483871 GTF3C3Q9Y5Q9 886 aa17.55■□□□□ 0.4
SRSF6-202ENST00000483871 SLX4Q8IY92 1834 aa17.54■□□□□ 0.4
SRSF6-202ENST00000483871 CACNA1SQ13698 1873 aa17.54■□□□□ 0.4
SRSF6-202ENST00000483871 SPEF2Q9C093 1822 aa17.54■□□□□ 0.4
SRSF6-202ENST00000483871 BBOX1O75936 387 aa17.54■□□□□ 0.4
SRSF6-202ENST00000483871 B4GALNT3Q6L9W6 998 aa17.54■□□□□ 0.4
SRSF6-202ENST00000483871 ATG9AQ7Z3C6 839 aa17.54■□□□□ 0.4
SRSF6-202ENST00000483871 BSDC1Q9NW68 430 aaPredicted RBP17.54■□□□□ 0.4
SRSF6-202ENST00000483871 RIPOR2Q9Y4F9 1068 aa17.54■□□□□ 0.4
SRSF6-202ENST00000483871 EYA2O00167 538 aa17.53■□□□□ 0.4
SRSF6-202ENST00000483871 APBB1O00213 710 aa17.53■□□□□ 0.4
SRSF6-202ENST00000483871 RWDD1Q9H446 243 aaPredicted RBP17.53■□□□□ 0.4
SRSF6-202ENST00000483871 DCTPP1Q9H773 170 aa17.53■□□□□ 0.4
SRSF6-202ENST00000483871 NOP58Q9Y2X3 529 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms