RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 LAMB2P55268 1798 aa12.56□□□□□ -0.4
TMEM39A-207ENST00000482162 IRS4O14654 1257 aaPredicted RBP12.55□□□□□ -0.4
TMEM39A-207ENST00000482162 TCERG1O14776 1098 aaKnown RBP12.55□□□□□ -0.4
TMEM39A-207ENST00000482162 EPHX2P34913 555 aa12.55□□□□□ -0.4
TMEM39A-207ENST00000482162 LARGE2Q8N3Y3 721 aa12.55□□□□□ -0.4
TMEM39A-207ENST00000482162 SUPT20HQ8NEM7 779 aa12.55□□□□□ -0.4
TMEM39A-207ENST00000482162 PASKQ96RG2 1323 aa12.55□□□□□ -0.4
TMEM39A-207ENST00000482162 PCCAP05165 728 aaPredicted RBP12.54□□□□□ -0.4
TMEM39A-207ENST00000482162 KIAA2012Q0VF49 1180 aa12.54□□□□□ -0.4
TMEM39A-207ENST00000482162 KSR2Q6VAB6 950 aa12.54□□□□□ -0.4
TMEM39A-207ENST00000482162 PNMA8AQ86V59 439 aaPredicted RBP12.54□□□□□ -0.4
TMEM39A-207ENST00000482162 MPNDQ8N594 471 aa12.54□□□□□ -0.4
TMEM39A-207ENST00000482162 CELF1Q92879 486 aaKnown RBP12.54□□□□□ -0.4
TMEM39A-207ENST00000482162 TMX4Q9H1E5 349 aaPredicted RBP12.54□□□□□ -0.4
TMEM39A-207ENST00000482162 ZNRF3Q9ULT6 936 aa12.54□□□□□ -0.4
TMEM39A-207ENST00000482162 DDX60Q8IY21 1712 aaKnown RBP12.54□□□□□ -0.4
TMEM39A-207ENST00000482162 PPIP5K2O43314 1243 aa12.53□□□□□ -0.4
TMEM39A-207ENST00000482162 DDX58O95786 925 aaKnown RBP12.53□□□□□ -0.4
TMEM39A-207ENST00000482162 IGKV5-2P06315 115 aa12.53□□□□□ -0.4
TMEM39A-207ENST00000482162 SCNN1DP51172 638 aa12.53□□□□□ -0.4
TMEM39A-207ENST00000482162 EIF6P56537 245 aaKnown RBP12.53□□□□□ -0.4
TMEM39A-207ENST00000482162 RPS8P62241 208 aaKnown RBP12.53□□□□□ -0.4
TMEM39A-207ENST00000482162 CXCL9Q07325 125 aa12.53□□□□□ -0.4
TMEM39A-207ENST00000482162 AOC3Q16853 763 aa12.53□□□□□ -0.4
TMEM39A-207ENST00000482162 TWISTNBQ3B726 338 aaPredicted RBP12.53□□□□□ -0.4
TMEM39A-207ENST00000482162 DPP8Q6V1X1 898 aaPredicted RBP12.53□□□□□ -0.4
TMEM39A-207ENST00000482162 MYD88Q99836 296 aa12.53□□□□□ -0.4
TMEM39A-207ENST00000482162 ADAMTSL1Q8N6G6 1762 aa12.53□□□□□ -0.4
TMEM39A-207ENST00000482162 PI4KAP2A4QPH2 592 aa12.52□□□□□ -0.41
TMEM39A-207ENST00000482162 VAMP4O75379 141 aa12.52□□□□□ -0.41
TMEM39A-207ENST00000482162 HSP90B1P14625 803 aaKnown RBP12.52□□□□□ -0.41
TMEM39A-207ENST00000482162 G2E3Q7L622 706 aa12.52□□□□□ -0.41
TMEM39A-207ENST00000482162 NIM1KQ8IY84 436 aa12.52□□□□□ -0.41
TMEM39A-207ENST00000482162 PI4KAP1Q8N8J0 262 aa12.52□□□□□ -0.41
TMEM39A-207ENST00000482162 ZNF428Q96B54 188 aa12.52□□□□□ -0.41
TMEM39A-207ENST00000482162 CREBZFQ9NS37 354 aa12.52□□□□□ -0.41
TMEM39A-207ENST00000482162 CWC25Q9NXE8 425 aaPredicted RBP12.52□□□□□ -0.41
TMEM39A-207ENST00000482162 MAP3K2Q9Y2U5 619 aa12.52□□□□□ -0.41
TMEM39A-207ENST00000482162 LRRC37AA6NMS7 1700 aa12.51□□□□□ -0.41
TMEM39A-207ENST00000482162 TAF1P21675 1872 aa12.51□□□□□ -0.41
TMEM39A-207ENST00000482162 PDE8AO60658 829 aa12.51□□□□□ -0.41
TMEM39A-207ENST00000482162 SLC4A2P04920 1241 aa12.51□□□□□ -0.41
TMEM39A-207ENST00000482162 PODXL2Q9NZ53 605 aa12.51□□□□□ -0.41
TMEM39A-207ENST00000482162 CDHR2Q9BYE9 1310 aa12.51□□□□□ -0.41
TMEM39A-207ENST00000482162 FANCIQ9NVI1 1328 aa12.51□□□□□ -0.41
TMEM39A-207ENST00000482162 DUOX1Q9NRD9 1551 aa12.51□□□□□ -0.41
TMEM39A-207ENST00000482162 COL4A1P02462 1669 aa12.51□□□□□ -0.41
TMEM39A-207ENST00000482162 YDJCA8MPS7 323 aa12.5□□□□□ -0.41
TMEM39A-207ENST00000482162 H7C1W4 665 aa12.5□□□□□ -0.41
TMEM39A-207ENST00000482162 EPS15P42566 896 aa12.5□□□□□ -0.41
TMEM39A-207ENST00000482162 RTL5Q5HYW3 569 aaPredicted RBP12.5□□□□□ -0.41
TMEM39A-207ENST00000482162 STK31Q9BXU1 1019 aa12.5□□□□□ -0.41
TMEM39A-207ENST00000482162 SPINK5Q9NQ38 1064 aaPredicted RBP12.5□□□□□ -0.41
TMEM39A-207ENST00000482162 GPRC5DQ9NZD1 345 aa12.5□□□□□ -0.41
TMEM39A-207ENST00000482162 POLLQ9UGP5 575 aa12.5□□□□□ -0.41
TMEM39A-207ENST00000482162 PGAP2Q9UHJ9 254 aa12.5□□□□□ -0.41
TMEM39A-207ENST00000482162 GJA3Q9Y6H8 435 aa12.5□□□□□ -0.41
TMEM39A-207ENST00000482162 LTBP1Q14766 1721 aa12.5□□□□□ -0.41
TMEM39A-207ENST00000482162 ZNF521Q96K83 1311 aa12.49□□□□□ -0.41
TMEM39A-207ENST00000482162 NEURL1BA8MQ27 555 aa12.49□□□□□ -0.41
TMEM39A-207ENST00000482162 GPSM2P81274 684 aa12.49□□□□□ -0.41
TMEM39A-207ENST00000482162 USP50Q70EL3 339 aaPredicted RBP12.49□□□□□ -0.41
TMEM39A-207ENST00000482162 CNTROBQ8N137 903 aa12.49□□□□□ -0.41
TMEM39A-207ENST00000482162 SEC31BQ9NQW1 1179 aa12.49□□□□□ -0.41
TMEM39A-207ENST00000482162 RTL9Q8NET4 1388 aa12.48□□□□□ -0.41
TMEM39A-207ENST00000482162 CASP7P55210 303 aa12.48□□□□□ -0.41
TMEM39A-207ENST00000482162 FLIIQ13045 1269 aa12.48□□□□□ -0.41
TMEM39A-207ENST00000482162 CCDC152Q4G0S7 254 aa12.48□□□□□ -0.41
TMEM39A-207ENST00000482162 EAPPQ56P03 285 aaPredicted RBP12.48□□□□□ -0.41
TMEM39A-207ENST00000482162 MAP1SQ66K74 1059 aaPredicted RBP12.48□□□□□ -0.41
TMEM39A-207ENST00000482162 CIAPIN1Q6FI81 312 aa12.48□□□□□ -0.41
TMEM39A-207ENST00000482162 TTLL11Q8NHH1 800 aa12.48□□□□□ -0.41
TMEM39A-207ENST00000482162 TBC1D16Q8TBP0 767 aa12.48□□□□□ -0.41
TMEM39A-207ENST00000482162 JARID2Q92833 1246 aaPredicted RBP12.48□□□□□ -0.41
TMEM39A-207ENST00000482162 PLA2G12BQ9BX93 195 aa12.48□□□□□ -0.41
TMEM39A-207ENST00000482162 NSFL1CQ9UNZ2 370 aaKnown RBP12.48□□□□□ -0.41
TMEM39A-207ENST00000482162 LMOD1P29536 600 aaPredicted RBP12.47□□□□□ -0.41
TMEM39A-207ENST00000482162 GMPSP49915 693 aaPredicted RBP12.47□□□□□ -0.41
TMEM39A-207ENST00000482162 EXOSC9Q06265 439 aaKnown RBP12.47□□□□□ -0.41
TMEM39A-207ENST00000482162 TNIP1Q15025 636 aa12.47□□□□□ -0.41
TMEM39A-207ENST00000482162 WASHC4Q2M389 1173 aa12.47□□□□□ -0.41
TMEM39A-207ENST00000482162 CWF19L2Q2TBE0 894 aaKnown RBP12.47□□□□□ -0.41
TMEM39A-207ENST00000482162 ADARB2Q9NS39 739 aaKnown RBP12.47□□□□□ -0.41
TMEM39A-207ENST00000482162 CACNA1FO60840 1977 aa12.47□□□□□ -0.41
TMEM39A-207ENST00000482162 TMEM88BA6NKF7 163 aa12.46□□□□□ -0.41
TMEM39A-207ENST00000482162 CTSWP56202 376 aa12.46□□□□□ -0.41
TMEM39A-207ENST00000482162 NEXNQ0ZGT2 675 aa12.46□□□□□ -0.41
TMEM39A-207ENST00000482162 GCKRQ14397 625 aa12.46□□□□□ -0.41
TMEM39A-207ENST00000482162 LINS1Q8NG48 757 aa12.46□□□□□ -0.41
TMEM39A-207ENST00000482162 DPF2Q92785 391 aa12.46□□□□□ -0.41
TMEM39A-207ENST00000482162 CNTNAP1P78357 1384 aa12.45□□□□□ -0.42
TMEM39A-207ENST00000482162 RAD17O75943 681 aa12.45□□□□□ -0.42
TMEM39A-207ENST00000482162 CSF1RP07333 972 aa12.45□□□□□ -0.42
TMEM39A-207ENST00000482162 HIRAP54198 1017 aaPredicted RBP12.45□□□□□ -0.42
TMEM39A-207ENST00000482162 COL13A1Q5TAT6 717 aaPredicted RBP12.45□□□□□ -0.42
TMEM39A-207ENST00000482162 ZC3H15Q8WU90 426 aaKnown RBP12.45□□□□□ -0.42
TMEM39A-207ENST00000482162 DNAAF4Q8WXU2 420 aa12.45□□□□□ -0.42
TMEM39A-207ENST00000482162 CLEC11AQ9Y240 323 aa12.45□□□□□ -0.42
TMEM39A-207ENST00000482162 SALL2Q9Y467 1007 aaPredicted RBP12.45□□□□□ -0.42
TMEM39A-207ENST00000482162 RASSF10A6NK89 507 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms