RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 NBPF26B4DH59 902 aa13.73□□□□□ -0.21
SMURF1-204ENST00000480055 DCTN1Q14203 1278 aa13.73□□□□□ -0.21
SMURF1-204ENST00000480055 CRY2Q49AN0 593 aa13.73□□□□□ -0.21
SMURF1-204ENST00000480055 NBPF10Q6P3W6 841 aaKnown RBP13.73□□□□□ -0.21
SMURF1-204ENST00000480055 NBPF15Q8N660 670 aa13.73□□□□□ -0.21
SMURF1-204ENST00000480055 BBXQ8WY36 941 aaPredicted RBP13.73□□□□□ -0.21
SMURF1-204ENST00000480055 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.73□□□□□ -0.21
SMURF1-204ENST00000480055 NGEFQ8N5V2 710 aa13.72□□□□□ -0.21
SMURF1-204ENST00000480055 EFCAB3Q8N7B9 438 aa13.72□□□□□ -0.21
SMURF1-204ENST00000480055 JDP2Q8WYK2 163 aa13.72□□□□□ -0.21
SMURF1-204ENST00000480055 IBTKQ9P2D0 1353 aaPredicted RBP13.71□□□□□ -0.21
SMURF1-204ENST00000480055 NEFMP07197 916 aa13.71□□□□□ -0.21
SMURF1-204ENST00000480055 LMOD1P29536 600 aaPredicted RBP13.71□□□□□ -0.21
SMURF1-204ENST00000480055 SCNN1DP51172 638 aa13.71□□□□□ -0.21
SMURF1-204ENST00000480055 HLFQ16534 295 aa13.71□□□□□ -0.21
SMURF1-204ENST00000480055 CC2D2BQ6DHV5 1058 aa13.71□□□□□ -0.21
SMURF1-204ENST00000480055 CAPNS2Q96L46 248 aa13.71□□□□□ -0.21
SMURF1-204ENST00000480055 MIS18AQ9NYP9 233 aa13.71□□□□□ -0.21
SMURF1-204ENST00000480055 PPP2R1AP30153 589 aa13.7□□□□□ -0.22
SMURF1-204ENST00000480055 ECE1P42892 770 aa13.7□□□□□ -0.22
SMURF1-204ENST00000480055 EIF6P56537 245 aaKnown RBP13.7□□□□□ -0.22
SMURF1-204ENST00000480055 TAF7Q15545 349 aaPredicted RBP13.7□□□□□ -0.22
SMURF1-204ENST00000480055 GJA3Q9Y6H8 435 aa13.7□□□□□ -0.22
SMURF1-204ENST00000480055 POLR2AP24928 1970 aaKnown RBP13.7□□□□□ -0.22
SMURF1-204ENST00000480055 TAF1P21675 1872 aa13.7□□□□□ -0.22
SMURF1-204ENST00000480055 AKAP11Q9UKA4 1901 aa13.69□□□□□ -0.22
SMURF1-204ENST00000480055 HTATSF1O43719 755 aaKnown RBP13.69□□□□□ -0.22
SMURF1-204ENST00000480055 RGS19P49795 217 aa13.69□□□□□ -0.22
SMURF1-204ENST00000480055 FMR1Q06787 632 aaKnown RBP eCLIP13.69□□□□□ -0.22
SMURF1-204ENST00000480055 GRIPAP1Q4V328 841 aa13.69□□□□□ -0.22
SMURF1-204ENST00000480055 NYXQ9GZU5 481 aa13.69□□□□□ -0.22
SMURF1-204ENST00000480055 LRRC37AA6NMS7 1700 aa13.69□□□□□ -0.22
SMURF1-204ENST00000480055 PDE4DIPQ5VU43 2346 aa13.69□□□□□ -0.22
SMURF1-204ENST00000480055 HOXA10P31260 410 aaPredicted RBP13.68□□□□□ -0.22
SMURF1-204ENST00000480055 EPS15P42566 896 aa13.68□□□□□ -0.22
SMURF1-204ENST00000480055 CST9Q5W186 159 aa13.68□□□□□ -0.22
SMURF1-204ENST00000480055 CYP4F22Q6NT55 531 aa13.68□□□□□ -0.22
SMURF1-204ENST00000480055 USP50Q70EL3 339 aaPredicted RBP13.68□□□□□ -0.22
SMURF1-204ENST00000480055 BEGAINQ9BUH8 593 aa13.68□□□□□ -0.22
SMURF1-204ENST00000480055 RRP7AQ9Y3A4 280 aaKnown RBP13.68□□□□□ -0.22
SMURF1-204ENST00000480055 TLL2Q9Y6L7 1015 aa13.68□□□□□ -0.22
SMURF1-204ENST00000480055 DDX60Q8IY21 1712 aaKnown RBP13.67□□□□□ -0.22
SMURF1-204ENST00000480055 MLLT1Q03111 559 aaPredicted RBP13.67□□□□□ -0.22
SMURF1-204ENST00000480055 KIF6Q6ZMV9 814 aa13.67□□□□□ -0.22
SMURF1-204ENST00000480055 PAXIP1Q6ZW49 1069 aaPredicted RBP13.67□□□□□ -0.22
SMURF1-204ENST00000480055 NUTM1Q86Y26 1132 aa13.67□□□□□ -0.22
SMURF1-204ENST00000480055 LARGE2Q8N3Y3 721 aa13.67□□□□□ -0.22
SMURF1-204ENST00000480055 SLC39A7Q92504 469 aa13.67□□□□□ -0.22
SMURF1-204ENST00000480055 RPGRQ92834 1020 aaKnown RBP13.67□□□□□ -0.22
SMURF1-204ENST00000480055 GPR101Q96P66 508 aaPredicted RBP13.67□□□□□ -0.22
SMURF1-204ENST00000480055 TNRC18O15417 2968 aaPredicted RBP13.67□□□□□ -0.22
SMURF1-204ENST00000480055 CCDC85CA6NKD9 419 aa13.66□□□□□ -0.22
SMURF1-204ENST00000480055 ERVV-1B6SEH8 477 aa13.66□□□□□ -0.22
SMURF1-204ENST00000480055 TRAF5O00463 557 aa13.66□□□□□ -0.22
SMURF1-204ENST00000480055 TCERG1O14776 1098 aaKnown RBP13.66□□□□□ -0.22
SMURF1-204ENST00000480055 MYL6BP14649 208 aa13.66□□□□□ -0.22
SMURF1-204ENST00000480055 SLC51AQ86UW1 340 aa13.66□□□□□ -0.22
SMURF1-204ENST00000480055 PNISRQ8TF01 805 aaKnown RBP13.66□□□□□ -0.22
SMURF1-204ENST00000480055 MAP3K15Q6ZN16 1313 aa13.65□□□□□ -0.22
SMURF1-204ENST00000480055 UBN2Q6ZU65 1347 aa13.65□□□□□ -0.22
SMURF1-204ENST00000480055 PPEF1O14829 653 aaPredicted RBP13.65□□□□□ -0.22
SMURF1-204ENST00000480055 GPTP24298 496 aa13.65□□□□□ -0.22
SMURF1-204ENST00000480055 MAP2K2P36507 400 aa13.65□□□□□ -0.22
SMURF1-204ENST00000480055 GRM1Q13255 1194 aa13.65□□□□□ -0.22
SMURF1-204ENST00000480055 IER5LQ5T953 404 aa13.65□□□□□ -0.22
SMURF1-204ENST00000480055 NIM1KQ8IY84 436 aa13.65□□□□□ -0.22
SMURF1-204ENST00000480055 CRAMP1Q96RY5 1269 aa13.65□□□□□ -0.22
SMURF1-204ENST00000480055 CA12O43570 354 aa13.64□□□□□ -0.23
SMURF1-204ENST00000480055 AOC2O75106 756 aa13.64□□□□□ -0.23
SMURF1-204ENST00000480055 RBM17Q96I25 401 aaKnown RBP13.64□□□□□ -0.23
SMURF1-204ENST00000480055 HHIPL1Q96JK4 782 aa13.64□□□□□ -0.23
SMURF1-204ENST00000480055 TMX4Q9H1E5 349 aaPredicted RBP13.64□□□□□ -0.23
SMURF1-204ENST00000480055 ZBTB3Q9H5J0 574 aa13.64□□□□□ -0.23
SMURF1-204ENST00000480055 ADARB2Q9NS39 739 aaKnown RBP13.64□□□□□ -0.23
SMURF1-204ENST00000480055 GPRC5DQ9NZD1 345 aa13.64□□□□□ -0.23
SMURF1-204ENST00000480055 TSKSQ9UJT2 592 aa13.64□□□□□ -0.23
SMURF1-204ENST00000480055 DUOX1Q9NRD9 1551 aa13.63□□□□□ -0.23
SMURF1-204ENST00000480055 SEC24BO95487 1268 aa13.63□□□□□ -0.23
SMURF1-204ENST00000480055 C7P10643 843 aa13.63□□□□□ -0.23
SMURF1-204ENST00000480055 SAPCD2Q86UD0 394 aa13.63□□□□□ -0.23
SMURF1-204ENST00000480055 CDHR2Q9BYE9 1310 aa13.63□□□□□ -0.23
SMURF1-204ENST00000480055 PPIP5K2O43314 1243 aa13.62□□□□□ -0.23
SMURF1-204ENST00000480055 NTSR2O95665 410 aa13.62□□□□□ -0.23
SMURF1-204ENST00000480055 BRPF1P55201 1214 aaPredicted RBP13.62□□□□□ -0.23
SMURF1-204ENST00000480055 AOC3Q16853 763 aa13.62□□□□□ -0.23
SMURF1-204ENST00000480055 SUSD4Q5VX71 490 aa13.62□□□□□ -0.23
SMURF1-204ENST00000480055 TTLL7Q6ZT98 887 aa13.62□□□□□ -0.23
SMURF1-204ENST00000480055 C3orf67Q6ZVT6 689 aa13.62□□□□□ -0.23
SMURF1-204ENST00000480055 ZNF34Q8IZ26 560 aa13.62□□□□□ -0.23
SMURF1-204ENST00000480055 VPS33BQ9H267 617 aa13.62□□□□□ -0.23
SMURF1-204ENST00000480055 RYDENQ9NUL5 291 aaKnown RBP13.62□□□□□ -0.23
SMURF1-204ENST00000480055 PSME4Q14997 1843 aa13.62□□□□□ -0.23
SMURF1-204ENST00000480055 CELF2O95319 508 aaKnown RBP13.61□□□□□ -0.23
SMURF1-204ENST00000480055 EIF4A1P60842 406 aaKnown RBP13.61□□□□□ -0.23
SMURF1-204ENST00000480055 THUMPD2Q9BTF0 503 aaKnown RBP13.61□□□□□ -0.23
SMURF1-204ENST00000480055 MCOLN1Q9GZU1 580 aa13.61□□□□□ -0.23
SMURF1-204ENST00000480055 PGAP2Q9UHJ9 254 aa13.61□□□□□ -0.23
SMURF1-204ENST00000480055 MAPK8IP3Q9UPT6 1336 aa13.61□□□□□ -0.23
SMURF1-204ENST00000480055 CXCL9Q07325 125 aa13.6□□□□□ -0.23
SMURF1-204ENST00000480055 PPP1R42Q7Z4L9 355 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms