RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 STRN4Q9NRL3 753 aa12.51□□□□□ -0.41
EWSR1-216ENST00000479135 DDX19BQ9UMR2 479 aa12.51□□□□□ -0.41
EWSR1-216ENST00000479135 NUCB1Q02818 461 aa12.51□□□□□ -0.41
EWSR1-216ENST00000479135 ZBTB17Q13105 803 aa12.51□□□□□ -0.41
EWSR1-216ENST00000479135 USP25Q9UHP3 1055 aa12.51□□□□□ -0.41
EWSR1-216ENST00000479135 A0A1B0GUA9 196 aa12.5□□□□□ -0.41
EWSR1-216ENST00000479135 RHOXF2BP0C7M4 288 aa12.5□□□□□ -0.41
EWSR1-216ENST00000479135 CASP2P42575 452 aa12.5□□□□□ -0.41
EWSR1-216ENST00000479135 MAP3K11Q16584 847 aa12.5□□□□□ -0.41
EWSR1-216ENST00000479135 KCTD17Q8N5Z5 321 aa12.5□□□□□ -0.41
EWSR1-216ENST00000479135 RHOXF2Q9BQY4 288 aa12.5□□□□□ -0.41
EWSR1-216ENST00000479135 KIF21BO75037 1637 aa12.5□□□□□ -0.41
EWSR1-216ENST00000479135 SMARCA4P51532 1647 aa12.5□□□□□ -0.41
EWSR1-216ENST00000479135 MICAL1Q8TDZ2 1067 aa12.5□□□□□ -0.41
EWSR1-216ENST00000479135 ZSCAN31Q96LW9 406 aaPredicted RBP12.5□□□□□ -0.41
EWSR1-216ENST00000479135 TRAK1Q9UPV9 953 aa12.5□□□□□ -0.41
EWSR1-216ENST00000479135 GTF3C6Q969F1 213 aa12.5□□□□□ -0.41
EWSR1-216ENST00000479135 ARHGAP35Q9NRY4 1499 aa12.5□□□□□ -0.41
EWSR1-216ENST00000479135 RIPK4P57078 832 aa12.5□□□□□ -0.41
EWSR1-216ENST00000479135 SAMD15Q9P1V8 674 aa12.5□□□□□ -0.41
EWSR1-216ENST00000479135 WHAMMP3Q1A5X7 153 aa12.5□□□□□ -0.41
EWSR1-216ENST00000479135 BICDL1Q6ZP65 573 aa12.5□□□□□ -0.41
EWSR1-216ENST00000479135 C6orf203Q9P0P8 240 aaPredicted RBP12.5□□□□□ -0.41
EWSR1-216ENST00000479135 TNIP1Q15025 636 aa12.5□□□□□ -0.41
EWSR1-216ENST00000479135 CCDC110Q8TBZ0 833 aa12.5□□□□□ -0.41
EWSR1-216ENST00000479135 RNF217Q8TC41 542 aa12.5□□□□□ -0.41
EWSR1-216ENST00000479135 CETN3O15182 167 aa12.49□□□□□ -0.41
EWSR1-216ENST00000479135 ZNF365Q70YC5 407 aa12.49□□□□□ -0.41
EWSR1-216ENST00000479135 NBNO60934 754 aa12.49□□□□□ -0.41
EWSR1-216ENST00000479135 CACTINQ8WUQ7 758 aaKnown RBP12.49□□□□□ -0.41
EWSR1-216ENST00000479135 CTAGE1Q96RT6 745 aa12.49□□□□□ -0.41
EWSR1-216ENST00000479135 IVLP07476 585 aa12.49□□□□□ -0.41
EWSR1-216ENST00000479135 RNASE9P60153 205 aaKnown RBP12.49□□□□□ -0.41
EWSR1-216ENST00000479135 BRD3Q15059 726 aa12.49□□□□□ -0.41
EWSR1-216ENST00000479135 ATP2A2P16615 1042 aaKnown RBP12.49□□□□□ -0.41
EWSR1-216ENST00000479135 SH3BGRP55822 239 aaPredicted RBP12.49□□□□□ -0.41
EWSR1-216ENST00000479135 RPAINQ86UA6 219 aa12.49□□□□□ -0.41
EWSR1-216ENST00000479135 STMN4Q9H169 189 aaPredicted RBP12.49□□□□□ -0.41
EWSR1-216ENST00000479135 ZNF219Q9P2Y4 722 aaPredicted RBP12.49□□□□□ -0.41
EWSR1-216ENST00000479135 UBE3AQ05086 875 aa12.49□□□□□ -0.41
EWSR1-216ENST00000479135 CWC27Q6UX04 472 aaKnown RBP12.49□□□□□ -0.41
EWSR1-216ENST00000479135 KLHDC4Q8TBB5 520 aa12.49□□□□□ -0.41
EWSR1-216ENST00000479135 ITM2BQ9Y287 266 aa12.49□□□□□ -0.41
EWSR1-216ENST00000479135 ASZ1Q8WWH4 475 aa12.49□□□□□ -0.41
EWSR1-216ENST00000479135 EBAG9O00559 213 aa12.48□□□□□ -0.41
EWSR1-216ENST00000479135 PDCP20941 246 aa12.48□□□□□ -0.41
EWSR1-216ENST00000479135 DIAPH2O60879 1101 aa12.48□□□□□ -0.41
EWSR1-216ENST00000479135 JAKMIP1Q96N16 626 aaKnown RBP12.48□□□□□ -0.41
EWSR1-216ENST00000479135 IWS1Q96ST2 819 aa12.48□□□□□ -0.41
EWSR1-216ENST00000479135 VAT1LQ9HCJ6 419 aa12.48□□□□□ -0.41
EWSR1-216ENST00000479135 HNRNPCP07910 306 aaKnown RBP eCLIP12.48□□□□□ -0.41
EWSR1-216ENST00000479135 MAN1A1P33908 653 aa12.48□□□□□ -0.41
EWSR1-216ENST00000479135 DCLK2Q8N568 766 aa12.48□□□□□ -0.41
EWSR1-216ENST00000479135 TERF2IPQ9NYB0 399 aa12.48□□□□□ -0.41
EWSR1-216ENST00000479135 CCDC172P0C7W6 258 aa12.48□□□□□ -0.41
EWSR1-216ENST00000479135 RASSF4Q9H2L5 321 aa12.48□□□□□ -0.41
EWSR1-216ENST00000479135 SLC4A7Q9Y6M7 1214 aa12.48□□□□□ -0.41
EWSR1-216ENST00000479135 APAF1O14727 1248 aa12.47□□□□□ -0.41
EWSR1-216ENST00000479135 MAP2K2P36507 400 aa12.47□□□□□ -0.41
EWSR1-216ENST00000479135 SPAG5Q96R06 1193 aa12.47□□□□□ -0.41
EWSR1-216ENST00000479135 NBPF3Q9H094 633 aa12.47□□□□□ -0.41
EWSR1-216ENST00000479135 GFAPP14136 432 aa12.47□□□□□ -0.41
EWSR1-216ENST00000479135 PNMA8AQ86V59 439 aaPredicted RBP12.47□□□□□ -0.41
EWSR1-216ENST00000479135 MCUR1Q96AQ8 359 aa12.47□□□□□ -0.41
EWSR1-216ENST00000479135 RPSAP08865 295 aaKnown RBP12.47□□□□□ -0.41
EWSR1-216ENST00000479135 NBPF1Q3BBV0 1214 aa12.47□□□□□ -0.41
EWSR1-216ENST00000479135 NUTM1Q86Y26 1132 aa12.47□□□□□ -0.41
EWSR1-216ENST00000479135 LRRC45Q96CN5 670 aa12.47□□□□□ -0.41
EWSR1-216ENST00000479135 GIMAP4Q9NUV9 329 aa12.47□□□□□ -0.41
EWSR1-216ENST00000479135 TRAPPC10P48553 1259 aa12.47□□□□□ -0.41
EWSR1-216ENST00000479135 RAB11FIP4Q86YS3 637 aa12.47□□□□□ -0.41
EWSR1-216ENST00000479135 MGARPQ8TDB4 240 aa12.47□□□□□ -0.41
EWSR1-216ENST00000479135 TRIM4Q9C037 500 aa12.47□□□□□ -0.41
EWSR1-216ENST00000479135 MINDY4BA8MYZ0 360 aa12.47□□□□□ -0.41
EWSR1-216ENST00000479135 RIOK3O14730 519 aaKnown RBP12.47□□□□□ -0.41
EWSR1-216ENST00000479135 PKD2Q13563 968 aa12.47□□□□□ -0.41
EWSR1-216ENST00000479135 AP1ARQ63HQ0 302 aa12.47□□□□□ -0.41
EWSR1-216ENST00000479135 PLEKHA4Q9H4M7 779 aa12.47□□□□□ -0.41
EWSR1-216ENST00000479135 PDRG1Q9NUG6 133 aa12.47□□□□□ -0.41
EWSR1-216ENST00000479135 KRT222Q8N1A0 295 aa12.47□□□□□ -0.41
EWSR1-216ENST00000479135 SEC63Q9UGP8 760 aaKnown RBP12.46□□□□□ -0.41
EWSR1-216ENST00000479135 KANK1Q14678 1352 aa12.46□□□□□ -0.41
EWSR1-216ENST00000479135 ATG3Q9NT62 314 aa12.46□□□□□ -0.41
EWSR1-216ENST00000479135 NLRP9Q7RTR0 991 aa12.46□□□□□ -0.41
EWSR1-216ENST00000479135 ZSCAN30Q86W11 494 aa12.46□□□□□ -0.41
EWSR1-216ENST00000479135 MTUS1Q9ULD2 1270 aa12.46□□□□□ -0.41
EWSR1-216ENST00000479135 PPP1R7Q15435 360 aa12.46□□□□□ -0.41
EWSR1-216ENST00000479135 CCDC85BQ15834 202 aaPredicted RBP12.46□□□□□ -0.41
EWSR1-216ENST00000479135 MUM1Q2TAK8 710 aa12.46□□□□□ -0.41
EWSR1-216ENST00000479135 MAK16Q9BXY0 300 aaKnown RBP12.46□□□□□ -0.41
EWSR1-216ENST00000479135 IDEP14735 1019 aa12.46□□□□□ -0.42
EWSR1-216ENST00000479135 NLRP5P59047 1200 aa12.46□□□□□ -0.42
EWSR1-216ENST00000479135 TSTA3Q13630 321 aaPredicted RBP12.45□□□□□ -0.42
EWSR1-216ENST00000479135 DUSP27Q5VZP5 1158 aa12.45□□□□□ -0.42
EWSR1-216ENST00000479135 FMN1Q68DA7 1419 aa12.45□□□□□ -0.42
EWSR1-216ENST00000479135 KIF6Q6ZMV9 814 aa12.45□□□□□ -0.42
EWSR1-216ENST00000479135 CCDC83Q8IWF9 413 aa12.45□□□□□ -0.42
EWSR1-216ENST00000479135 hCG_2014768A0A024R1R8 64 aa12.45□□□□□ -0.42
EWSR1-216ENST00000479135 AFAP1L1Q8TED9 768 aa12.45□□□□□ -0.42
EWSR1-216ENST00000479135 RPGRQ92834 1020 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms