RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 ATP6V0A2Q9Y487 856 aa10.59□□□□□ -0.71
HDAC6-221ENST00000477561 TIAM2Q8IVF5 1701 aa10.58□□□□□ -0.72
HDAC6-221ENST00000477561 LAMB2P55268 1798 aa10.58□□□□□ -0.72
HDAC6-221ENST00000477561 BBOX1O75936 387 aa10.58□□□□□ -0.72
HDAC6-221ENST00000477561 TOMM70O94826 608 aa10.58□□□□□ -0.72
HDAC6-221ENST00000477561 PCCAP05165 728 aaPredicted RBP10.58□□□□□ -0.72
HDAC6-221ENST00000477561 NEXNQ0ZGT2 675 aa10.58□□□□□ -0.72
HDAC6-221ENST00000477561 SF3B3Q15393 1217 aaKnown RBP10.58□□□□□ -0.72
HDAC6-221ENST00000477561 SP8Q8IXZ3 490 aa10.58□□□□□ -0.72
HDAC6-221ENST00000477561 CELF1Q92879 486 aaKnown RBP10.58□□□□□ -0.72
HDAC6-221ENST00000477561 CDCA7LQ96GN5 454 aa10.58□□□□□ -0.72
HDAC6-221ENST00000477561 PSMD1Q99460 953 aa10.58□□□□□ -0.72
HDAC6-221ENST00000477561 DDX60Q8IY21 1712 aaKnown RBP10.58□□□□□ -0.72
HDAC6-221ENST00000477561 SNED1Q8TER0 1413 aa10.58□□□□□ -0.72
HDAC6-221ENST00000477561 NEURL1BA8MQ27 555 aa10.57□□□□□ -0.72
HDAC6-221ENST00000477561 POTECB2RU33 542 aa10.57□□□□□ -0.72
HDAC6-221ENST00000477561 F6X3S4 739 aa10.57□□□□□ -0.72
HDAC6-221ENST00000477561 VEGFAP15692 232 aaPredicted RBP10.57□□□□□ -0.72
HDAC6-221ENST00000477561 LARGE2Q8N3Y3 721 aa10.57□□□□□ -0.72
HDAC6-221ENST00000477561 DNAAF4Q8WXU2 420 aa10.57□□□□□ -0.72
HDAC6-221ENST00000477561 SEC31BQ9NQW1 1179 aa10.57□□□□□ -0.72
HDAC6-221ENST00000477561 ZNF541Q9H0D2 1346 aa10.57□□□□□ -0.72
HDAC6-221ENST00000477561 TAF1P21675 1872 aa10.56□□□□□ -0.72
HDAC6-221ENST00000477561 E9PSI1 815 aa10.56□□□□□ -0.72
HDAC6-221ENST00000477561 ZBTB22O15209 634 aa10.56□□□□□ -0.72
HDAC6-221ENST00000477561 PPIP5K2O43314 1243 aa10.56□□□□□ -0.72
HDAC6-221ENST00000477561 PDE8AO60658 829 aa10.56□□□□□ -0.72
HDAC6-221ENST00000477561 SLFN5Q08AF3 891 aa10.56□□□□□ -0.72
HDAC6-221ENST00000477561 AOC3Q16853 763 aa10.56□□□□□ -0.72
HDAC6-221ENST00000477561 DPP8Q6V1X1 898 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-221ENST00000477561 MPNDQ8N594 471 aa10.56□□□□□ -0.72
HDAC6-221ENST00000477561 JDP2Q8WYK2 163 aa10.56□□□□□ -0.72
HDAC6-221ENST00000477561 DICER1Q9UPY3 1922 aaKnown RBP10.56□□□□□ -0.72
HDAC6-221ENST00000477561 COL4A1P02462 1669 aa10.55□□□□□ -0.72
HDAC6-221ENST00000477561 COL4A5P29400 1685 aa10.55□□□□□ -0.72
HDAC6-221ENST00000477561 RPS8P62241 208 aaKnown RBP10.55□□□□□ -0.72
HDAC6-221ENST00000477561 GRIPAP1Q4V328 841 aa10.55□□□□□ -0.72
HDAC6-221ENST00000477561 UBE3BQ7Z3V4 1068 aa10.55□□□□□ -0.72
HDAC6-221ENST00000477561 RBM46Q8TBY0 533 aaKnown RBP10.55□□□□□ -0.72
HDAC6-221ENST00000477561 NSFL1CQ9UNZ2 370 aaKnown RBP10.55□□□□□ -0.72
HDAC6-221ENST00000477561 GJA3Q9Y6H8 435 aa10.55□□□□□ -0.72
HDAC6-221ENST00000477561 H7C1W4 665 aa10.54□□□□□ -0.72
HDAC6-221ENST00000477561 FZD9O00144 591 aa10.54□□□□□ -0.72
HDAC6-221ENST00000477561 HSP90B1P14625 803 aaKnown RBP10.54□□□□□ -0.72
HDAC6-221ENST00000477561 HSPA6P17066 643 aa10.54□□□□□ -0.72
HDAC6-221ENST00000477561 GCKRQ14397 625 aa10.54□□□□□ -0.72
HDAC6-221ENST00000477561 CCDC152Q4G0S7 254 aa10.54□□□□□ -0.72
HDAC6-221ENST00000477561 LINS1Q8NG48 757 aa10.54□□□□□ -0.72
HDAC6-221ENST00000477561 CDHR2Q9BYE9 1310 aa10.54□□□□□ -0.72
HDAC6-221ENST00000477561 RIMBP2O15034 1052 aa10.53□□□□□ -0.72
HDAC6-221ENST00000477561 POTEIP0CG38 1075 aa10.53□□□□□ -0.72
HDAC6-221ENST00000477561 POTEJP0CG39 1038 aa10.53□□□□□ -0.72
HDAC6-221ENST00000477561 CTSWP56202 376 aa10.53□□□□□ -0.72
HDAC6-221ENST00000477561 EIF6P56537 245 aaKnown RBP10.53□□□□□ -0.72
HDAC6-221ENST00000477561 GPSM2P81274 684 aa10.53□□□□□ -0.72
HDAC6-221ENST00000477561 SLC4A10Q6U841 1118 aa10.53□□□□□ -0.72
HDAC6-221ENST00000477561 TMC4Q7Z404 712 aa10.53□□□□□ -0.72
HDAC6-221ENST00000477561 NIM1KQ8IY84 436 aa10.53□□□□□ -0.72
HDAC6-221ENST00000477561 MRPL50Q8N5N7 158 aaKnown RBP10.53□□□□□ -0.72
HDAC6-221ENST00000477561 SUPT20HQ8NEM7 779 aa10.53□□□□□ -0.72
HDAC6-221ENST00000477561 GPR101Q96P66 508 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-221ENST00000477561 BCL2L13Q9BXK5 485 aa10.53□□□□□ -0.72
HDAC6-221ENST00000477561 RTFDC1Q9BY42 306 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-221ENST00000477561 GREM2Q9H772 168 aa10.53□□□□□ -0.72
HDAC6-221ENST00000477561 FOXD4L1Q9NU39 408 aa10.53□□□□□ -0.72
HDAC6-221ENST00000477561 C6orf229H3BNL8 230 aa10.52□□□□□ -0.73
HDAC6-221ENST00000477561 BEND3Q5T5X7 828 aa10.52□□□□□ -0.73
HDAC6-221ENST00000477561 SMC1BQ8NDV3 1235 aa10.52□□□□□ -0.73
HDAC6-221ENST00000477561 TTLL11Q8NHH1 800 aa10.52□□□□□ -0.73
HDAC6-221ENST00000477561 SSH1Q8WYL5 1049 aa10.52□□□□□ -0.73
HDAC6-221ENST00000477561 POLLQ9UGP5 575 aa10.52□□□□□ -0.73
HDAC6-221ENST00000477561 WDR90Q96KV7 1748 aa10.52□□□□□ -0.73
HDAC6-221ENST00000477561 CASP7P55210 303 aa10.51□□□□□ -0.73
HDAC6-221ENST00000477561 HTRA3P83110 453 aa10.51□□□□□ -0.73
HDAC6-221ENST00000477561 KIAA2012Q0VF49 1180 aa10.51□□□□□ -0.73
HDAC6-221ENST00000477561 FSTL1Q12841 308 aa10.51□□□□□ -0.73
HDAC6-221ENST00000477561 WASHC4Q2M389 1173 aa10.51□□□□□ -0.73
HDAC6-221ENST00000477561 EAPPQ56P03 285 aaPredicted RBP10.51□□□□□ -0.73
HDAC6-221ENST00000477561 ANKRD18AQ8IVF6 992 aa10.51□□□□□ -0.73
HDAC6-221ENST00000477561 GPC2Q8N158 579 aa10.51□□□□□ -0.73
HDAC6-221ENST00000477561 L3MBTL3Q96JM7 780 aaPredicted RBP10.51□□□□□ -0.73
HDAC6-221ENST00000477561 VPS33BQ9H267 617 aa10.51□□□□□ -0.73
HDAC6-221ENST00000477561 TAF1DQ9H5J8 278 aaPredicted RBP10.51□□□□□ -0.73
HDAC6-221ENST00000477561 ANKIB1Q9P2G1 1089 aa10.51□□□□□ -0.73
HDAC6-221ENST00000477561 HACL1Q9UJ83 578 aa10.51□□□□□ -0.73
HDAC6-221ENST00000477561 ZNRF3Q9ULT6 936 aa10.51□□□□□ -0.73
HDAC6-221ENST00000477561 IQCA1LA6NCM1 817 aa10.5□□□□□ -0.73
HDAC6-221ENST00000477561 RAD17O75943 681 aa10.5□□□□□ -0.73
HDAC6-221ENST00000477561 EPHX2P34913 555 aa10.5□□□□□ -0.73
HDAC6-221ENST00000477561 CXCL9Q07325 125 aa10.5□□□□□ -0.73
HDAC6-221ENST00000477561 DOK7Q18PE1 504 aa10.5□□□□□ -0.73
HDAC6-221ENST00000477561 TRMT2AQ8IZ69 625 aaKnown RBP10.5□□□□□ -0.73
HDAC6-221ENST00000477561 TBC1D16Q8TBP0 767 aa10.5□□□□□ -0.73
HDAC6-221ENST00000477561 CDC5LQ99459 802 aaKnown RBP10.5□□□□□ -0.73
HDAC6-221ENST00000477561 DBNDD1Q9H9R9 158 aa10.5□□□□□ -0.73
HDAC6-221ENST00000477561 CLEC11AQ9Y240 323 aa10.5□□□□□ -0.73
HDAC6-221ENST00000477561 DUOX1Q9NRD9 1551 aa10.49□□□□□ -0.73
HDAC6-221ENST00000477561 WTIPA6NIX2 430 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-221ENST00000477561 YDJCA8MPS7 323 aa10.49□□□□□ -0.73
HDAC6-221ENST00000477561 UFL1O94874 794 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms