RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 ATP6V0A2Q9Y487 856 aa22.58■■□□□ 1.21
PTPN7-209ENST00000477554 E9PSI1 815 aa22.57■■□□□ 1.2
PTPN7-209ENST00000477554 TRMT2AQ8IZ69 625 aaKnown RBP22.57■■□□□ 1.2
PTPN7-209ENST00000477554 DNAAF4Q8WXU2 420 aa22.57■■□□□ 1.2
PTPN7-209ENST00000477554 BCL2L13Q9BXK5 485 aa22.57■■□□□ 1.2
PTPN7-209ENST00000477554 LRRC37AA6NMS7 1700 aa22.57■■□□□ 1.2
PTPN7-209ENST00000477554 DDNO94850 711 aaPredicted RBP22.57■■□□□ 1.2
PTPN7-209ENST00000477554 IARSP41252 1262 aaKnown RBP22.57■■□□□ 1.2
PTPN7-209ENST00000477554 CHMP4AQ9BY43 222 aa22.57■■□□□ 1.2
PTPN7-209ENST00000477554 CEP350Q5VT06 3117 aa22.56■■□□□ 1.2
PTPN7-209ENST00000477554 PSMD1Q99460 953 aa22.56■■□□□ 1.2
PTPN7-209ENST00000477554 ZC3H4Q9UPT8 1303 aaKnown RBP22.55■■□□□ 1.2
PTPN7-209ENST00000477554 CASP7P55210 303 aa22.55■■□□□ 1.2
PTPN7-209ENST00000477554 UBE3BQ7Z3V4 1068 aa22.55■■□□□ 1.2
PTPN7-209ENST00000477554 MRPL50Q8N5N7 158 aaKnown RBP22.55■■□□□ 1.2
PTPN7-209ENST00000477554 SSH1Q8WYL5 1049 aa22.55■■□□□ 1.2
PTPN7-209ENST00000477554 SPEF2Q9C093 1822 aa22.54■■□□□ 1.2
PTPN7-209ENST00000477554 H7C1W4 665 aa22.54■■□□□ 1.2
PTPN7-209ENST00000477554 GCKRQ14397 625 aa22.54■■□□□ 1.2
PTPN7-209ENST00000477554 WDR90Q96KV7 1748 aa22.54■■□□□ 1.2
PTPN7-209ENST00000477554 KDM2BQ8NHM5 1336 aa22.53■■□□□ 1.2
PTPN7-209ENST00000477554 LTBP1Q14766 1721 aa22.53■■□□□ 1.2
PTPN7-209ENST00000477554 MYH3P11055 1940 aa22.53■■□□□ 1.2
PTPN7-209ENST00000477554 PDE8AO60658 829 aa22.53■■□□□ 1.2
PTPN7-209ENST00000477554 BBOX1O75936 387 aa22.53■■□□□ 1.2
PTPN7-209ENST00000477554 NEXNQ0ZGT2 675 aa22.53■■□□□ 1.2
PTPN7-209ENST00000477554 BEND3Q5T5X7 828 aa22.53■■□□□ 1.2
PTPN7-209ENST00000477554 SP8Q8IXZ3 490 aa22.53■■□□□ 1.2
PTPN7-209ENST00000477554 YTHDC1Q96MU7 727 aaKnown RBP22.53■■□□□ 1.2
PTPN7-209ENST00000477554 GPR101Q96P66 508 aaPredicted RBP22.53■■□□□ 1.2
PTPN7-209ENST00000477554 CDHR2Q9BYE9 1310 aa22.52■■□□□ 1.2
PTPN7-209ENST00000477554 HNRNPUQ00839 825 aaKnown RBP eCLIP22.52■■□□□ 1.2
PTPN7-209ENST00000477554 AOC3Q16853 763 aa22.52■■□□□ 1.2
PTPN7-209ENST00000477554 CC2D2BQ6DHV5 1058 aa22.51■■□□□ 1.19
PTPN7-209ENST00000477554 WTIPA6NIX2 430 aaPredicted RBP22.5■■□□□ 1.19
PTPN7-209ENST00000477554 FZD9O00144 591 aa22.5■■□□□ 1.19
PTPN7-209ENST00000477554 CTSWP56202 376 aa22.5■■□□□ 1.19
PTPN7-209ENST00000477554 GPSM2P81274 684 aa22.5■■□□□ 1.19
PTPN7-209ENST00000477554 LINS1Q8NG48 757 aa22.5■■□□□ 1.19
PTPN7-209ENST00000477554 TTLL11Q8NHH1 800 aa22.5■■□□□ 1.19
PTPN7-209ENST00000477554 GREM2Q9H772 168 aa22.5■■□□□ 1.19
PTPN7-209ENST00000477554 POTEIP0CG38 1075 aa22.49■■□□□ 1.19
PTPN7-209ENST00000477554 POTEJP0CG39 1038 aa22.49■■□□□ 1.19
PTPN7-209ENST00000477554 RPS8P62241 208 aaKnown RBP22.48■■□□□ 1.19
PTPN7-209ENST00000477554 SLC4A10Q6U841 1118 aa22.48■■□□□ 1.19
PTPN7-209ENST00000477554 DPP8Q6V1X1 898 aaPredicted RBP22.48■■□□□ 1.19
PTPN7-209ENST00000477554 LARGE2Q8N3Y3 721 aa22.48■■□□□ 1.19
PTPN7-209ENST00000477554 MPNDQ8N594 471 aa22.48■■□□□ 1.19
PTPN7-209ENST00000477554 RTFDC1Q9BY42 306 aaPredicted RBP22.48■■□□□ 1.19
PTPN7-209ENST00000477554 PPIP5K2O43314 1243 aa22.48■■□□□ 1.19
PTPN7-209ENST00000477554 EPHA10Q5JZY3 1008 aa22.48■■□□□ 1.19
PTPN7-209ENST00000477554 POLLQ9UGP5 575 aa22.48■■□□□ 1.19
PTPN7-209ENST00000477554 TOMM70O94826 608 aa22.47■■□□□ 1.19
PTPN7-209ENST00000477554 CCDC152Q4G0S7 254 aa22.47■■□□□ 1.19
PTPN7-209ENST00000477554 DPY19L2Q6NUT2 758 aa22.46■■□□□ 1.19
PTPN7-209ENST00000477554 NSFL1CQ9UNZ2 370 aaKnown RBP22.46■■□□□ 1.19
PTPN7-209ENST00000477554 VEGFAP15692 232 aaPredicted RBP22.45■■□□□ 1.18
PTPN7-209ENST00000477554 FAM161AQ3B820 660 aa22.45■■□□□ 1.18
PTPN7-209ENST00000477554 YDJCA8MPS7 323 aa22.44■■□□□ 1.18
PTPN7-209ENST00000477554 FOXO4P98177 505 aa22.44■■□□□ 1.18
PTPN7-209ENST00000477554 JDP2Q8WYK2 163 aa22.43■■□□□ 1.18
PTPN7-209ENST00000477554 PLA2G12BQ9BX93 195 aa22.43■■□□□ 1.18
PTPN7-209ENST00000477554 GJA3Q9Y6H8 435 aa22.43■■□□□ 1.18
PTPN7-209ENST00000477554 RIMBP2O15034 1052 aa22.42■■□□□ 1.18
PTPN7-209ENST00000477554 KIAA2012Q0VF49 1180 aa22.42■■□□□ 1.18
PTPN7-209ENST00000477554 KCNQ5Q9NR82 932 aa22.42■■□□□ 1.18
PTPN7-209ENST00000477554 SMC4Q9NTJ3 1288 aa22.42■■□□□ 1.18
PTPN7-209ENST00000477554 ZBED9Q6R2W3 1325 aa22.42■■□□□ 1.18
PTPN7-209ENST00000477554 CSF1RP07333 972 aa22.41■■□□□ 1.18
PTPN7-209ENST00000477554 HTRA3P83110 453 aa22.41■■□□□ 1.18
PTPN7-209ENST00000477554 GRIPAP1Q4V328 841 aa22.41■■□□□ 1.18
PTPN7-209ENST00000477554 NIM1KQ8IY84 436 aa22.41■■□□□ 1.18
PTPN7-209ENST00000477554 C16orf71Q8IYS4 520 aaPredicted RBP22.41■■□□□ 1.18
PTPN7-209ENST00000477554 TBC1D16Q8TBP0 767 aa22.41■■□□□ 1.18
PTPN7-209ENST00000477554 RBM46Q8TBY0 533 aaKnown RBP22.41■■□□□ 1.18
PTPN7-209ENST00000477554 KAZALD1Q96I82 304 aa22.41■■□□□ 1.18
PTPN7-209ENST00000477554 L3MBTL3Q96JM7 780 aaPredicted RBP22.41■■□□□ 1.18
PTPN7-209ENST00000477554 NBPF7P0C2Y1 421 aaPredicted RBP22.4■■□□□ 1.18
PTPN7-209ENST00000477554 ITGA6P23229 1130 aa22.4■■□□□ 1.18
PTPN7-209ENST00000477554 TMC4Q7Z404 712 aa22.4■■□□□ 1.18
PTPN7-209ENST00000477554 ANKRD18AQ8IVF6 992 aa22.4■■□□□ 1.18
PTPN7-209ENST00000477554 SRCIN1Q9C0H9 1055 aa22.4■■□□□ 1.18
PTPN7-209ENST00000477554 TMX4Q9H1E5 349 aaPredicted RBP22.4■■□□□ 1.18
PTPN7-209ENST00000477554 DBNDD1Q9H9R9 158 aa22.4■■□□□ 1.18
PTPN7-209ENST00000477554 C6orf229H3BNL8 230 aa22.4■■□□□ 1.18
PTPN7-209ENST00000477554 GRM8O00222 908 aa22.4■■□□□ 1.18
PTPN7-209ENST00000477554 CXCL9Q07325 125 aa22.4■■□□□ 1.18
PTPN7-209ENST00000477554 SUCLG2Q96I99 432 aa22.4■■□□□ 1.18
PTPN7-209ENST00000477554 SCN9AQ15858 1988 aa22.39■■□□□ 1.18
PTPN7-209ENST00000477554 RTL9Q8NET4 1388 aa22.39■■□□□ 1.18
PTPN7-209ENST00000477554 SCN4AP35499 1836 aa22.39■■□□□ 1.17
PTPN7-209ENST00000477554 RAD17O75943 681 aa22.39■■□□□ 1.17
PTPN7-209ENST00000477554 HSPA6P17066 643 aa22.39■■□□□ 1.17
PTPN7-209ENST00000477554 SCNN1DP51172 638 aa22.39■■□□□ 1.17
PTPN7-209ENST00000477554 DOK7Q18PE1 504 aa22.39■■□□□ 1.17
PTPN7-209ENST00000477554 ALDH1L2Q3SY69 923 aa22.39■■□□□ 1.17
PTPN7-209ENST00000477554 TAF1DQ9H5J8 278 aaPredicted RBP22.39■■□□□ 1.17
PTPN7-209ENST00000477554 NOB1Q9ULX3 412 aaKnown RBP22.39■■□□□ 1.17
PTPN7-209ENST00000477554 TNNQ9UQP3 1299 aa22.39■■□□□ 1.17
PTPN7-209ENST00000477554 SHTN1A0MZ66 631 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms