RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 ZNF219Q9P2Y4 722 aaPredicted RBP20.03■□□□□ 0.8
COPS3-207ENST00000477299 COG6Q9Y2V7 657 aa20.03■□□□□ 0.8
COPS3-207ENST00000477299 OLFM4Q6UX06 510 aa20.02■□□□□ 0.8
COPS3-207ENST00000477299 ITPRIPQ8IWB1 547 aa20.02■□□□□ 0.8
COPS3-207ENST00000477299 PELP1Q8IZL8 1130 aaKnown RBP20.02■□□□□ 0.8
COPS3-207ENST00000477299 MASTLQ96GX5 879 aa20.02■□□□□ 0.8
COPS3-207ENST00000477299 PLA2G12BQ9BX93 195 aa20.02■□□□□ 0.8
COPS3-207ENST00000477299 PIM2Q9P1W9 311 aa20.02■□□□□ 0.8
COPS3-207ENST00000477299 NPR1P16066 1061 aa20.01■□□□□ 0.79
COPS3-207ENST00000477299 HOXA10P31260 410 aaPredicted RBP20.01■□□□□ 0.79
COPS3-207ENST00000477299 CTSWP56202 376 aa20.01■□□□□ 0.79
COPS3-207ENST00000477299 RPGRQ92834 1020 aaKnown RBP20.01■□□□□ 0.79
COPS3-207ENST00000477299 ARFGEF1Q9Y6D6 1849 aa20.01■□□□□ 0.79
COPS3-207ENST00000477299 CSF1RP07333 972 aa20■□□□□ 0.79
COPS3-207ENST00000477299 STYK1Q6J9G0 422 aa20■□□□□ 0.79
COPS3-207ENST00000477299 LMBR1LQ6UX01 489 aa20■□□□□ 0.79
COPS3-207ENST00000477299 ANKRD44Q8N8A2 993 aa20■□□□□ 0.79
COPS3-207ENST00000477299 CELF1Q92879 486 aaKnown RBP20■□□□□ 0.79
COPS3-207ENST00000477299 BICC1Q9H694 974 aaKnown RBP20■□□□□ 0.79
COPS3-207ENST00000477299 GREM2Q9H772 168 aa20■□□□□ 0.79
COPS3-207ENST00000477299 BCS1LQ9Y276 419 aa20■□□□□ 0.79
COPS3-207ENST00000477299 ZBTB7BO15156 539 aaPredicted RBP19.99■□□□□ 0.79
COPS3-207ENST00000477299 TTLL6Q8N841 843 aa19.99■□□□□ 0.79
COPS3-207ENST00000477299 LRRFIP2Q9Y608 721 aaKnown RBP19.99■□□□□ 0.79
COPS3-207ENST00000477299 UBTFL1P0CB47 393 aaPredicted RBP19.98■□□□□ 0.79
COPS3-207ENST00000477299 FAM161AQ3B820 660 aa19.98■□□□□ 0.79
COPS3-207ENST00000477299 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.98■□□□□ 0.79
COPS3-207ENST00000477299 RBM17Q96I25 401 aaKnown RBP19.98■□□□□ 0.79
COPS3-207ENST00000477299 C1orf115Q9H7X2 142 aa19.98■□□□□ 0.79
COPS3-207ENST00000477299 PDE3AQ14432 1141 aa19.97■□□□□ 0.79
COPS3-207ENST00000477299 MVPQ14764 893 aaKnown RBP19.97■□□□□ 0.79
COPS3-207ENST00000477299 DALRD3Q5D0E6 543 aaKnown RBP19.97■□□□□ 0.79
COPS3-207ENST00000477299 PRPF40BQ6NWY9 871 aaKnown RBP19.97■□□□□ 0.79
COPS3-207ENST00000477299 DDX46Q7L014 1031 aaKnown RBP19.97■□□□□ 0.79
COPS3-207ENST00000477299 CRAMP1Q96RY5 1269 aa19.97■□□□□ 0.79
COPS3-207ENST00000477299 PDZRN3Q9UPQ7 1066 aa19.97■□□□□ 0.79
COPS3-207ENST00000477299 CHMP3Q9Y3E7 222 aa19.97■□□□□ 0.79
COPS3-207ENST00000477299 C21orf2O43822 256 aa19.96■□□□□ 0.79
COPS3-207ENST00000477299 CCDC152Q4G0S7 254 aa19.96■□□□□ 0.79
COPS3-207ENST00000477299 CNKSR1Q969H4 720 aa19.96■□□□□ 0.79
COPS3-207ENST00000477299 ZNF594Q96JF6 807 aaPredicted RBP19.96■□□□□ 0.79
COPS3-207ENST00000477299 CCDC88AQ3V6T2 1871 aa19.96■□□□□ 0.79
COPS3-207ENST00000477299 GOLGB1Q14789 3259 aaKnown RBP19.95■□□□□ 0.78
COPS3-207ENST00000477299 MS4A1P11836 297 aa19.95■□□□□ 0.78
COPS3-207ENST00000477299 GPR162Q16538 588 aa19.95■□□□□ 0.78
COPS3-207ENST00000477299 C7orf43Q8WVR3 580 aa19.95■□□□□ 0.78
COPS3-207ENST00000477299 ITGA6P23229 1130 aa19.94■□□□□ 0.78
COPS3-207ENST00000477299 ALDH1B1P30837 517 aa19.94■□□□□ 0.78
COPS3-207ENST00000477299 IRX6P78412 446 aaPredicted RBP19.94■□□□□ 0.78
COPS3-207ENST00000477299 GRAPQ13588 217 aa19.94■□□□□ 0.78
COPS3-207ENST00000477299 RABL6Q3YEC7 729 aaPredicted RBP19.94■□□□□ 0.78
COPS3-207ENST00000477299 GRAPLQ8TC17 118 aaPredicted RBP19.94■□□□□ 0.78
COPS3-207ENST00000477299 CRBNQ96SW2 442 aa19.94■□□□□ 0.78
COPS3-207ENST00000477299 FER1L6Q2WGJ9 1857 aa19.93■□□□□ 0.78
COPS3-207ENST00000477299 GNAI3P08754 354 aa19.93■□□□□ 0.78
COPS3-207ENST00000477299 HSP90B1P14625 803 aaKnown RBP19.93■□□□□ 0.78
COPS3-207ENST00000477299 RPS8P62241 208 aaKnown RBP19.93■□□□□ 0.78
COPS3-207ENST00000477299 KLHDC4Q8TBB5 520 aa19.93■□□□□ 0.78
COPS3-207ENST00000477299 SBF1O95248 1867 aa19.91■□□□□ 0.78
COPS3-207ENST00000477299 PPEF1O14829 653 aaPredicted RBP19.91■□□□□ 0.78
COPS3-207ENST00000477299 GNAI2P04899 355 aa19.91■□□□□ 0.78
COPS3-207ENST00000477299 RTL9Q8NET4 1388 aa19.91■□□□□ 0.78
COPS3-207ENST00000477299 WTIPA6NIX2 430 aaPredicted RBP19.9■□□□□ 0.78
COPS3-207ENST00000477299 BBOX1O75936 387 aa19.9■□□□□ 0.78
COPS3-207ENST00000477299 RFX5P48382 616 aaPredicted RBP19.9■□□□□ 0.78
COPS3-207ENST00000477299 PUS3Q9BZE2 481 aaKnown RBP19.9■□□□□ 0.78
COPS3-207ENST00000477299 ZBTB40Q9NUA8 1239 aa19.9■□□□□ 0.78
COPS3-207ENST00000477299 DDX19BQ9UMR2 479 aa19.9■□□□□ 0.78
COPS3-207ENST00000477299 PNMA6EA0A0J9YXQ4 647 aa19.89■□□□□ 0.77
COPS3-207ENST00000477299 A0A1B0GUL6 1792 aa19.89■□□□□ 0.77
COPS3-207ENST00000477299 ANKRD18BA2A2Z9 1011 aa19.89■□□□□ 0.77
COPS3-207ENST00000477299 LRRC37AA6NMS7 1700 aa19.89■□□□□ 0.77
COPS3-207ENST00000477299 PRELPP51888 382 aa19.89■□□□□ 0.77
COPS3-207ENST00000477299 IFIT5Q13325 482 aaKnown RBP19.89■□□□□ 0.77
COPS3-207ENST00000477299 ARHGAP27Q6ZUM4 889 aa19.89■□□□□ 0.77
COPS3-207ENST00000477299 ATP6V0A2Q9Y487 856 aa19.89■□□□□ 0.77
COPS3-207ENST00000477299 SNED1Q8TER0 1413 aa19.88■□□□□ 0.77
COPS3-207ENST00000477299 ANKRD18AQ8IVF6 992 aa19.88■□□□□ 0.77
COPS3-207ENST00000477299 SP8Q8IXZ3 490 aa19.88■□□□□ 0.77
COPS3-207ENST00000477299 PA2G4Q9UQ80 394 aaKnown RBP19.88■□□□□ 0.77
COPS3-207ENST00000477299 RASSF7Q02833 373 aa19.87■□□□□ 0.77
COPS3-207ENST00000477299 CCDC57Q2TAC2 916 aa19.87■□□□□ 0.77
COPS3-207ENST00000477299 UTRNP46939 3433 aa19.87■□□□□ 0.77
COPS3-207ENST00000477299 NFKBIEO00221 500 aa19.86■□□□□ 0.77
COPS3-207ENST00000477299 GPSM2P81274 684 aa19.86■□□□□ 0.77
COPS3-207ENST00000477299 LRRC24Q50LG9 513 aa19.86■□□□□ 0.77
COPS3-207ENST00000477299 EXOC6Q8TAG9 804 aa19.86■□□□□ 0.77
COPS3-207ENST00000477299 CDC5LQ99459 802 aaKnown RBP19.86■□□□□ 0.77
COPS3-207ENST00000477299 LTBP1Q14766 1721 aa19.85■□□□□ 0.77
COPS3-207ENST00000477299 SRGAP3O43295 1099 aa19.85■□□□□ 0.77
COPS3-207ENST00000477299 ATP8B2P98198 1209 aa19.85■□□□□ 0.77
COPS3-207ENST00000477299 PTPN12Q05209 780 aaKnown RBP19.85■□□□□ 0.77
COPS3-207ENST00000477299 SIRT2Q8IXJ6 389 aa19.85■□□□□ 0.77
COPS3-207ENST00000477299 HELBQ8NG08 1087 aaPredicted RBP19.85■□□□□ 0.77
COPS3-207ENST00000477299 MINPP1Q9UNW1 487 aa19.85■□□□□ 0.77
COPS3-207ENST00000477299 SNAP23O00161 211 aa19.84■□□□□ 0.77
COPS3-207ENST00000477299 IGHMBP2P38935 993 aaKnown RBP19.84■□□□□ 0.77
COPS3-207ENST00000477299 MTX1Q13505 466 aa19.84■□□□□ 0.77
COPS3-207ENST00000477299 CEP85Q6P2H3 762 aa19.84■□□□□ 0.77
COPS3-207ENST00000477299 GPR101Q96P66 508 aaPredicted RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms