RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-204ENST00000476972 SCN4AP35499 1836 aa24.59■■□□□ 1.53
GMDS-204ENST00000476972 SCNN1DP51172 638 aa24.59■■□□□ 1.53
GMDS-204ENST00000476972 NIM1KQ8IY84 436 aa24.59■■□□□ 1.53
GMDS-204ENST00000476972 FANCIQ9NVI1 1328 aa24.59■■□□□ 1.53
GMDS-204ENST00000476972 PPIP5K2O43314 1243 aa24.58■■□□□ 1.53
GMDS-204ENST00000476972 HCLS1P14317 486 aaPredicted RBP24.58■■□□□ 1.53
GMDS-204ENST00000476972 CCDC30Q5VVM6 783 aa24.58■■□□□ 1.53
GMDS-204ENST00000476972 WDR63Q8IWG1 891 aa24.58■■□□□ 1.53
GMDS-204ENST00000476972 PHAXQ9H814 394 aaKnown RBP24.58■■□□□ 1.53
GMDS-204ENST00000476972 AOC3Q16853 763 aa24.57■■□□□ 1.52
GMDS-204ENST00000476972 DEFB115Q30KQ5 88 aa24.57■■□□□ 1.52
GMDS-204ENST00000476972 ABCC4O15439 1325 aa24.57■■□□□ 1.52
GMDS-204ENST00000476972 DDX60Q8IY21 1712 aaKnown RBP24.56■■□□□ 1.52
GMDS-204ENST00000476972 RASSF10A6NK89 507 aa24.56■■□□□ 1.52
GMDS-204ENST00000476972 BBOX1O75936 387 aa24.56■■□□□ 1.52
GMDS-204ENST00000476972 GOLGA2Q08379 1002 aa24.56■■□□□ 1.52
GMDS-204ENST00000476972 TWISTNBQ3B726 338 aaPredicted RBP24.56■■□□□ 1.52
GMDS-204ENST00000476972 CHMP4AQ9BY43 222 aa24.56■■□□□ 1.52
GMDS-204ENST00000476972 VPS33BQ9H267 617 aa24.56■■□□□ 1.52
GMDS-204ENST00000476972 ZNF428Q96B54 188 aa24.55■■□□□ 1.52
GMDS-204ENST00000476972 AIDAQ96BJ3 306 aa24.55■■□□□ 1.52
GMDS-204ENST00000476972 ISCA1Q9BUE6 129 aa24.55■■□□□ 1.52
GMDS-204ENST00000476972 TRMT112Q9UI30 125 aaKnown RBP24.55■■□□□ 1.52
GMDS-204ENST00000476972 ATP5J2-PTCD1G3V325 749 aa24.54■■□□□ 1.52
GMDS-204ENST00000476972 FMR1Q06787 632 aaKnown RBP eCLIP24.54■■□□□ 1.52
GMDS-204ENST00000476972 USP50Q70EL3 339 aaPredicted RBP24.54■■□□□ 1.52
GMDS-204ENST00000476972 SP8Q8IXZ3 490 aa24.54■■□□□ 1.52
GMDS-204ENST00000476972 RTFDC1Q9BY42 306 aaPredicted RBP24.54■■□□□ 1.52
GMDS-204ENST00000476972 WBP1LQ9NX94 342 aa24.54■■□□□ 1.52
GMDS-204ENST00000476972 ABT1Q9ULW3 272 aaKnown RBP24.54■■□□□ 1.52
GMDS-204ENST00000476972 SH3TC1Q8TE82 1336 aa24.54■■□□□ 1.52
GMDS-204ENST00000476972 CTCFP49711 727 aaPredicted RBP24.53■■□□□ 1.52
GMDS-204ENST00000476972 CXCL9Q07325 125 aa24.53■■□□□ 1.52
GMDS-204ENST00000476972 DPP8Q6V1X1 898 aaPredicted RBP24.53■■□□□ 1.52
GMDS-204ENST00000476972 RIC3Q7Z5B4 369 aa24.53■■□□□ 1.52
GMDS-204ENST00000476972 SUPT20HQ8NEM7 779 aa24.53■■□□□ 1.52
GMDS-204ENST00000476972 ZNRF3Q9ULT6 936 aa24.53■■□□□ 1.52
GMDS-204ENST00000476972 MPNDQ8N594 471 aa24.52■■□□□ 1.52
GMDS-204ENST00000476972 SPINK5Q9NQ38 1064 aaPredicted RBP24.52■■□□□ 1.52
GMDS-204ENST00000476972 PRDM10Q9NQV6 1147 aa24.52■■□□□ 1.52
GMDS-204ENST00000476972 ADAMTSL1Q8N6G6 1762 aa24.52■■□□□ 1.52
GMDS-204ENST00000476972 DDX46Q7L014 1031 aaKnown RBP24.51■■□□□ 1.51
GMDS-204ENST00000476972 STK31Q9BXU1 1019 aa24.51■■□□□ 1.51
GMDS-204ENST00000476972 GPRC5DQ9NZD1 345 aa24.51■■□□□ 1.51
GMDS-204ENST00000476972 WDR33Q9C0J8 1336 aaKnown RBP24.51■■□□□ 1.51
GMDS-204ENST00000476972 ADARB2Q9NS39 739 aaKnown RBP24.5■■□□□ 1.51
GMDS-204ENST00000476972 TRAF5O00463 557 aa24.49■■□□□ 1.51
GMDS-204ENST00000476972 DDX58O95786 925 aaKnown RBP24.49■■□□□ 1.51
GMDS-204ENST00000476972 TRIM28Q13263 835 aaKnown RBP24.49■■□□□ 1.51
GMDS-204ENST00000476972 GRAPQ13588 217 aa24.49■■□□□ 1.51
GMDS-204ENST00000476972 CST9Q5W186 159 aa24.49■■□□□ 1.51
GMDS-204ENST00000476972 GRAPLQ8TC17 118 aaPredicted RBP24.49■■□□□ 1.51
GMDS-204ENST00000476972 GMPSP49915 693 aaPredicted RBP24.48■■□□□ 1.51
GMDS-204ENST00000476972 EXOSC9Q06265 439 aaKnown RBP24.48■■□□□ 1.51
GMDS-204ENST00000476972 KIAA2012Q0VF49 1180 aa24.48■■□□□ 1.51
GMDS-204ENST00000476972 ZNF521Q96K83 1311 aa24.48■■□□□ 1.51
GMDS-204ENST00000476972 MYD88Q99836 296 aa24.48■■□□□ 1.51
GMDS-204ENST00000476972 LBX1P52954 281 aa24.47■■□□□ 1.51
GMDS-204ENST00000476972 FAM89AQ96GI7 184 aa24.47■■□□□ 1.51
GMDS-204ENST00000476972 LTBP1Q14766 1721 aa24.47■■□□□ 1.51
GMDS-204ENST00000476972 CACNA1FO60840 1977 aa24.46■■□□□ 1.51
GMDS-204ENST00000476972 RAD17O75943 681 aa24.46■■□□□ 1.51
GMDS-204ENST00000476972 CIAPIN1Q6FI81 312 aa24.46■■□□□ 1.51
GMDS-204ENST00000476972 MYH16Q9H6N6 1097 aa24.46■■□□□ 1.51
GMDS-204ENST00000476972 CCER2I3L3R5 266 aa24.45■■□□□ 1.5
GMDS-204ENST00000476972 VAMP4O75379 141 aa24.45■■□□□ 1.5
GMDS-204ENST00000476972 SLC4A2P04920 1241 aa24.45■■□□□ 1.5
GMDS-204ENST00000476972 MAP2K1Q02750 393 aaPredicted RBP24.45■■□□□ 1.5
GMDS-204ENST00000476972 RTL5Q5HYW3 569 aaPredicted RBP24.45■■□□□ 1.5
GMDS-204ENST00000476972 G2E3Q7L622 706 aa24.45■■□□□ 1.5
GMDS-204ENST00000476972 METTL22Q9BUU2 404 aaPredicted RBP24.45■■□□□ 1.5
GMDS-204ENST00000476972 MAP3K2Q9Y2U5 619 aa24.45■■□□□ 1.5
GMDS-204ENST00000476972 TAF1P21675 1872 aa24.45■■□□□ 1.5
GMDS-204ENST00000476972 KSR2Q6VAB6 950 aa24.44■■□□□ 1.5
GMDS-204ENST00000476972 PAXIP1Q6ZW49 1069 aaPredicted RBP24.44■■□□□ 1.5
GMDS-204ENST00000476972 CAPNS2Q96L46 248 aa24.44■■□□□ 1.5
GMDS-204ENST00000476972 PI4KAP2A4QPH2 592 aa24.43■■□□□ 1.5
GMDS-204ENST00000476972 TNIP1Q15025 636 aa24.43■■□□□ 1.5
GMDS-204ENST00000476972 CYP4F22Q6NT55 531 aa24.43■■□□□ 1.5
GMDS-204ENST00000476972 TMC4Q7Z404 712 aa24.43■■□□□ 1.5
GMDS-204ENST00000476972 PI4KAP1Q8N8J0 262 aa24.43■■□□□ 1.5
GMDS-204ENST00000476972 BCL2L13Q9BXK5 485 aa24.43■■□□□ 1.5
GMDS-204ENST00000476972 HSPA8P11142 646 aaKnown RBP24.42■■□□□ 1.5
GMDS-204ENST00000476972 GRM1Q13255 1194 aa24.42■■□□□ 1.5
GMDS-204ENST00000476972 ZBTB38Q8NAP3 1195 aaPredicted RBP24.42■■□□□ 1.5
GMDS-204ENST00000476972 CCDC191Q8NCU4 936 aa24.42■■□□□ 1.5
GMDS-204ENST00000476972 GPR101Q96P66 508 aaPredicted RBP24.42■■□□□ 1.5
GMDS-204ENST00000476972 PGAP2Q9UHJ9 254 aa24.42■■□□□ 1.5
GMDS-204ENST00000476972 YDJCA8MPS7 323 aa24.41■■□□□ 1.5
GMDS-204ENST00000476972 IRS4O14654 1257 aaPredicted RBP24.41■■□□□ 1.5
GMDS-204ENST00000476972 HIRAP54198 1017 aaPredicted RBP24.41■■□□□ 1.5
GMDS-204ENST00000476972 FLIIQ13045 1269 aa24.41■■□□□ 1.5
GMDS-204ENST00000476972 SF3B3Q15393 1217 aaKnown RBP24.41■■□□□ 1.5
GMDS-204ENST00000476972 CELF1Q92879 486 aaKnown RBP24.41■■□□□ 1.5
GMDS-204ENST00000476972 CWC25Q9NXE8 425 aaPredicted RBP24.41■■□□□ 1.5
GMDS-204ENST00000476972 TLL2Q9Y6L7 1015 aa24.41■■□□□ 1.5
GMDS-204ENST00000476972 LRRC37AA6NMS7 1700 aa24.41■■□□□ 1.5
GMDS-204ENST00000476972 COL4A1P02462 1669 aa24.4■■□□□ 1.5
GMDS-204ENST00000476972 ECE1P42892 770 aa24.4■■□□□ 1.5
GMDS-204ENST00000476972 GLIS2Q9BZE0 524 aaPredicted RBP24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms