RNA–Protein interactions for RNA: ENST00000475211.1

ERGIC3-213, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 514 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-213ENST00000475211 C20orf194Q5TEA3 1177 aa17.29■□□□□ 0.36
ERGIC3-213ENST00000475211 RTL9Q8NET4 1388 aa17.28■□□□□ 0.36
ERGIC3-213ENST00000475211 TTLL11Q8NHH1 800 aa17.28■□□□□ 0.36
ERGIC3-213ENST00000475211 CNKSR1Q969H4 720 aa17.28■□□□□ 0.36
ERGIC3-213ENST00000475211 RBM17Q96I25 401 aaKnown RBP17.28■□□□□ 0.36
ERGIC3-213ENST00000475211 SUCLG2Q96I99 432 aa17.28■□□□□ 0.36
ERGIC3-213ENST00000475211 PIM2Q9P1W9 311 aa17.28■□□□□ 0.36
ERGIC3-213ENST00000475211 COG6Q9Y2V7 657 aa17.28■□□□□ 0.36
ERGIC3-213ENST00000475211 SUPT16HQ9Y5B9 1047 aaKnown RBP17.28■□□□□ 0.36
ERGIC3-213ENST00000475211 MYH3P11055 1940 aa17.27■□□□□ 0.36
ERGIC3-213ENST00000475211 ZBTB7BO15156 539 aaPredicted RBP17.27■□□□□ 0.36
ERGIC3-213ENST00000475211 KCNA3P22001 575 aa17.27■□□□□ 0.36
ERGIC3-213ENST00000475211 ALDH1B1P30837 517 aa17.27■□□□□ 0.36
ERGIC3-213ENST00000475211 FOXO4P98177 505 aa17.27■□□□□ 0.36
ERGIC3-213ENST00000475211 DDX46Q7L014 1031 aaKnown RBP17.27■□□□□ 0.36
ERGIC3-213ENST00000475211 CRAMP1Q96RY5 1269 aa17.27■□□□□ 0.36
ERGIC3-213ENST00000475211 GNAI2P04899 355 aa17.26■□□□□ 0.35
ERGIC3-213ENST00000475211 CSF1RP07333 972 aa17.26■□□□□ 0.35
ERGIC3-213ENST00000475211 RABL6Q3YEC7 729 aaPredicted RBP17.26■□□□□ 0.35
ERGIC3-213ENST00000475211 TTLL6Q8N841 843 aa17.26■□□□□ 0.35
ERGIC3-213ENST00000475211 ZNF622Q969S3 477 aaKnown RBP eCLIP17.26■□□□□ 0.35
ERGIC3-213ENST00000475211 KAZALD1Q96I82 304 aa17.26■□□□□ 0.35
ERGIC3-213ENST00000475211 BRCA1P38398 1863 aaKnown RBP17.25■□□□□ 0.35
ERGIC3-213ENST00000475211 DALRD3Q5D0E6 543 aaKnown RBP17.25■□□□□ 0.35
ERGIC3-213ENST00000475211 EPHA10Q5JZY3 1008 aa17.25■□□□□ 0.35
ERGIC3-213ENST00000475211 LMBR1LQ6UX01 489 aa17.25■□□□□ 0.35
ERGIC3-213ENST00000475211 BICC1Q9H694 974 aaKnown RBP17.25■□□□□ 0.35
ERGIC3-213ENST00000475211 LRRFIP2Q9Y608 721 aaKnown RBP17.25■□□□□ 0.35
ERGIC3-213ENST00000475211 GRAPQ13588 217 aa17.24■□□□□ 0.35
ERGIC3-213ENST00000475211 ANKRD44Q8N8A2 993 aa17.24■□□□□ 0.35
ERGIC3-213ENST00000475211 GRAPLQ8TC17 118 aaPredicted RBP17.24■□□□□ 0.35
ERGIC3-213ENST00000475211 GREM2Q9H772 168 aa17.24■□□□□ 0.35
ERGIC3-213ENST00000475211 FAM161AQ3B820 660 aa17.23■□□□□ 0.35
ERGIC3-213ENST00000475211 PRPF40BQ6NWY9 871 aaKnown RBP17.23■□□□□ 0.35
ERGIC3-213ENST00000475211 TMC4Q7Z404 712 aa17.23■□□□□ 0.35
ERGIC3-213ENST00000475211 CDC5LQ99459 802 aaKnown RBP17.23■□□□□ 0.35
ERGIC3-213ENST00000475211 CHMP3Q9Y3E7 222 aa17.23■□□□□ 0.35
ERGIC3-213ENST00000475211 BBOX1O75936 387 aa17.22■□□□□ 0.35
ERGIC3-213ENST00000475211 IFIT5Q13325 482 aaKnown RBP17.22■□□□□ 0.35
ERGIC3-213ENST00000475211 MTX1Q13505 466 aa17.22■□□□□ 0.35
ERGIC3-213ENST00000475211 CCDC85AQ96PX6 553 aaPredicted RBP17.22■□□□□ 0.35
ERGIC3-213ENST00000475211 ZBTB40Q9NUA8 1239 aa17.22■□□□□ 0.35
ERGIC3-213ENST00000475211 ANKRD18BA2A2Z9 1011 aa17.21■□□□□ 0.35
ERGIC3-213ENST00000475211 ITGA6P23229 1130 aa17.21■□□□□ 0.35
ERGIC3-213ENST00000475211 CCDC57Q2TAC2 916 aa17.21■□□□□ 0.35
ERGIC3-213ENST00000475211 SEC31BQ9NQW1 1179 aa17.21■□□□□ 0.35
ERGIC3-213ENST00000475211 PPEF1O14829 653 aaPredicted RBP17.2■□□□□ 0.34
ERGIC3-213ENST00000475211 RPS8P62241 208 aaKnown RBP17.2■□□□□ 0.34
ERGIC3-213ENST00000475211 SOGA3Q5TF21 947 aa17.2■□□□□ 0.34
ERGIC3-213ENST00000475211 ANKRD18AQ8IVF6 992 aa17.2■□□□□ 0.34
ERGIC3-213ENST00000475211 CELF1Q92879 486 aaKnown RBP17.2■□□□□ 0.34
ERGIC3-213ENST00000475211 BCS1LQ9Y276 419 aa17.2■□□□□ 0.34
ERGIC3-213ENST00000475211 IGHMBP2P38935 993 aaKnown RBP17.19■□□□□ 0.34
ERGIC3-213ENST00000475211 AAMPQ13685 434 aa17.19■□□□□ 0.34
ERGIC3-213ENST00000475211 CC2D2BQ6DHV5 1058 aa17.19■□□□□ 0.34
ERGIC3-213ENST00000475211 CRBNQ96SW2 442 aa17.19■□□□□ 0.34
ERGIC3-213ENST00000475211 ARFGEF1Q9Y6D6 1849 aa17.19■□□□□ 0.34
ERGIC3-213ENST00000475211 GRIPAP1Q4V328 841 aa17.18■□□□□ 0.34
ERGIC3-213ENST00000475211 TAF7LQ5H9L4 462 aa17.18■□□□□ 0.34
ERGIC3-213ENST00000475211 TMX4Q9H1E5 349 aaPredicted RBP17.18■□□□□ 0.34
ERGIC3-213ENST00000475211 C1orf115Q9H7X2 142 aa17.18■□□□□ 0.34
ERGIC3-213ENST00000475211 WWC3Q9ULE0 1092 aa17.18■□□□□ 0.34
ERGIC3-213ENST00000475211 ATP6V0A2Q9Y487 856 aa17.18■□□□□ 0.34
ERGIC3-213ENST00000475211 SLX4Q8IY92 1834 aa17.18■□□□□ 0.34
ERGIC3-213ENST00000475211 LRRC37AA6NMS7 1700 aa17.17■□□□□ 0.34
ERGIC3-213ENST00000475211 SRGAP3O43295 1099 aa17.17■□□□□ 0.34
ERGIC3-213ENST00000475211 C7orf43Q8WVR3 580 aa17.17■□□□□ 0.34
ERGIC3-213ENST00000475211 BSDC1Q9NW68 430 aaPredicted RBP17.17■□□□□ 0.34
ERGIC3-213ENST00000475211 COL4A1P02462 1669 aa17.16■□□□□ 0.34
ERGIC3-213ENST00000475211 CACNA1SQ13698 1873 aa17.16■□□□□ 0.34
ERGIC3-213ENST00000475211 C21orf2O43822 256 aa17.16■□□□□ 0.34
ERGIC3-213ENST00000475211 GPR162Q16538 588 aa17.16■□□□□ 0.34
ERGIC3-213ENST00000475211 CCDC93Q567U6 631 aa17.16■□□□□ 0.34
ERGIC3-213ENST00000475211 CEP85Q6P2H3 762 aa17.16■□□□□ 0.34
ERGIC3-213ENST00000475211 RPAP2Q8IXW5 612 aaPredicted RBP17.16■□□□□ 0.34
ERGIC3-213ENST00000475211 SP8Q8IXZ3 490 aa17.16■□□□□ 0.34
ERGIC3-213ENST00000475211 PELP1Q8IZL8 1130 aaKnown RBP17.16■□□□□ 0.34
ERGIC3-213ENST00000475211 MPHOSPH8Q99549 860 aa17.16■□□□□ 0.34
ERGIC3-213ENST00000475211 DCAF8L1A6NGE4 600 aa17.15■□□□□ 0.34
ERGIC3-213ENST00000475211 GRIN3BO60391 1043 aa17.15■□□□□ 0.34
ERGIC3-213ENST00000475211 YBX3P16989 372 aaKnown RBP eCLIP17.15■□□□□ 0.343e-16■■□□□ 11.5
ERGIC3-213ENST00000475211 RFX5P48382 616 aaPredicted RBP17.15■□□□□ 0.34
ERGIC3-213ENST00000475211 ATP8B2P98198 1209 aa17.15■□□□□ 0.34
ERGIC3-213ENST00000475211 FBXO3Q9UK99 471 aa17.15■□□□□ 0.34
ERGIC3-213ENST00000475211 HMMRO75330 724 aa17.14■□□□□ 0.33
ERGIC3-213ENST00000475211 LDHAL6AQ6ZMR3 332 aa17.14■□□□□ 0.33
ERGIC3-213ENST00000475211 RTKN2Q8IZC4 609 aa17.14■□□□□ 0.33
ERGIC3-213ENST00000475211 SSH3Q8TE77 659 aa17.14■□□□□ 0.33
ERGIC3-213ENST00000475211 COPRSQ9NQ92 184 aa17.14■□□□□ 0.33
ERGIC3-213ENST00000475211 TAF1P21675 1872 aa17.14■□□□□ 0.33
ERGIC3-213ENST00000475211 SNED1Q8TER0 1413 aa17.13■□□□□ 0.33
ERGIC3-213ENST00000475211 PNMA6EA0A0J9YXQ4 647 aa17.13■□□□□ 0.33
ERGIC3-213ENST00000475211 PTPN12Q05209 780 aaKnown RBP17.13■□□□□ 0.33
ERGIC3-213ENST00000475211 POLA2Q14181 598 aa17.13■□□□□ 0.33
ERGIC3-213ENST00000475211 ZNF594Q96JF6 807 aaPredicted RBP17.13■□□□□ 0.33
ERGIC3-213ENST00000475211 ZNF219Q9P2Y4 722 aaPredicted RBP17.13■□□□□ 0.33
ERGIC3-213ENST00000475211 EXOC6Q8TAG9 804 aa17.12■□□□□ 0.33
ERGIC3-213ENST00000475211 CNNM1Q9NRU3 951 aa17.12■□□□□ 0.33
ERGIC3-213ENST00000475211 SPEF2Q9C093 1822 aa17.12■□□□□ 0.33
ERGIC3-213ENST00000475211 EYA2O00167 538 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 264.6 ms