RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 HACL1Q9UJ83 578 aa11.63□□□□□ -0.55
USF1-204ENST00000472217 SALL2Q9Y467 1007 aaPredicted RBP11.63□□□□□ -0.55
USF1-204ENST00000472217 LTBP1Q14766 1721 aa11.63□□□□□ -0.55
USF1-204ENST00000472217 FANCIQ9NVI1 1328 aa11.62□□□□□ -0.55
USF1-204ENST00000472217 IRS4O14654 1257 aaPredicted RBP11.62□□□□□ -0.55
USF1-204ENST00000472217 PPIP5K2O43314 1243 aa11.62□□□□□ -0.55
USF1-204ENST00000472217 DDX58O95786 925 aaKnown RBP11.62□□□□□ -0.55
USF1-204ENST00000472217 EIF6P56537 245 aaKnown RBP11.62□□□□□ -0.55
USF1-204ENST00000472217 SF3B3Q15393 1217 aaKnown RBP11.62□□□□□ -0.55
USF1-204ENST00000472217 DPP8Q6V1X1 898 aaPredicted RBP11.62□□□□□ -0.55
USF1-204ENST00000472217 NIM1KQ8IY84 436 aa11.62□□□□□ -0.55
USF1-204ENST00000472217 ZBTB38Q8NAP3 1195 aaPredicted RBP11.62□□□□□ -0.55
USF1-204ENST00000472217 METTL22Q9BUU2 404 aaPredicted RBP11.62□□□□□ -0.55
USF1-204ENST00000472217 STK31Q9BXU1 1019 aa11.62□□□□□ -0.55
USF1-204ENST00000472217 RTFDC1Q9BY42 306 aaPredicted RBP11.62□□□□□ -0.55
USF1-204ENST00000472217 CEP350Q5VT06 3117 aa11.61□□□□□ -0.55
USF1-204ENST00000472217 EPHX2P34913 555 aa11.61□□□□□ -0.55
USF1-204ENST00000472217 EAPPQ56P03 285 aaPredicted RBP11.61□□□□□ -0.55
USF1-204ENST00000472217 TMC4Q7Z404 712 aa11.61□□□□□ -0.55
USF1-204ENST00000472217 LDHDQ86WU2 507 aa11.61□□□□□ -0.55
USF1-204ENST00000472217 FAM9BQ8IZU0 186 aa11.61□□□□□ -0.55
USF1-204ENST00000472217 MPNDQ8N594 471 aa11.61□□□□□ -0.55
USF1-204ENST00000472217 CCDC191Q8NCU4 936 aa11.61□□□□□ -0.55
USF1-204ENST00000472217 SUPT20HQ8NEM7 779 aa11.61□□□□□ -0.55
USF1-204ENST00000472217 CELF1Q92879 486 aaKnown RBP11.61□□□□□ -0.55
USF1-204ENST00000472217 KLRG1Q96E93 195 aa11.61□□□□□ -0.55
USF1-204ENST00000472217 VPS33BQ9H267 617 aa11.61□□□□□ -0.55
USF1-204ENST00000472217 MAP3K2Q9Y2U5 619 aa11.61□□□□□ -0.55
USF1-204ENST00000472217 GJA3Q9Y6H8 435 aa11.61□□□□□ -0.55
USF1-204ENST00000472217 PI4KAP2A4QPH2 592 aa11.6□□□□□ -0.55
USF1-204ENST00000472217 PCCAP05165 728 aaPredicted RBP11.6□□□□□ -0.55
USF1-204ENST00000472217 KSR2Q6VAB6 950 aa11.6□□□□□ -0.55
USF1-204ENST00000472217 G2E3Q7L622 706 aa11.6□□□□□ -0.55
USF1-204ENST00000472217 WDR63Q8IWG1 891 aa11.6□□□□□ -0.55
USF1-204ENST00000472217 PI4KAP1Q8N8J0 262 aa11.6□□□□□ -0.55
USF1-204ENST00000472217 JARID2Q92833 1246 aaPredicted RBP11.6□□□□□ -0.55
USF1-204ENST00000472217 CWC25Q9NXE8 425 aaPredicted RBP11.6□□□□□ -0.55
USF1-204ENST00000472217 SLC4A2P04920 1241 aa11.59□□□□□ -0.55
USF1-204ENST00000472217 IGKV5-2P06315 115 aa11.59□□□□□ -0.55
USF1-204ENST00000472217 SCNN1DP51172 638 aa11.59□□□□□ -0.55
USF1-204ENST00000472217 KIAA2012Q0VF49 1180 aa11.59□□□□□ -0.55
USF1-204ENST00000472217 HSP90B1P14625 803 aaKnown RBP11.58□□□□□ -0.56
USF1-204ENST00000472217 EXOSC9Q06265 439 aaKnown RBP11.58□□□□□ -0.56
USF1-204ENST00000472217 CWF19L2Q2TBE0 894 aaKnown RBP11.58□□□□□ -0.56
USF1-204ENST00000472217 PNMA8AQ86V59 439 aaPredicted RBP11.58□□□□□ -0.56
USF1-204ENST00000472217 JMYQ8N9B5 988 aa11.58□□□□□ -0.56
USF1-204ENST00000472217 SPINK5Q9NQ38 1064 aaPredicted RBP11.58□□□□□ -0.56
USF1-204ENST00000472217 SEC31BQ9NQW1 1179 aa11.58□□□□□ -0.56
USF1-204ENST00000472217 ZNRF3Q9ULT6 936 aa11.58□□□□□ -0.56
USF1-204ENST00000472217 PASKQ96RG2 1323 aa11.58□□□□□ -0.56
USF1-204ENST00000472217 CDHR2Q9BYE9 1310 aa11.58□□□□□ -0.56
USF1-204ENST00000472217 PDE8AO60658 829 aa11.57□□□□□ -0.56
USF1-204ENST00000472217 LMOD1P29536 600 aaPredicted RBP11.57□□□□□ -0.56
USF1-204ENST00000472217 EPS15P42566 896 aa11.57□□□□□ -0.56
USF1-204ENST00000472217 RPS8P62241 208 aaKnown RBP11.57□□□□□ -0.56
USF1-204ENST00000472217 GPSM2P81274 684 aa11.57□□□□□ -0.56
USF1-204ENST00000472217 CXCL9Q07325 125 aa11.57□□□□□ -0.56
USF1-204ENST00000472217 NEXNQ0ZGT2 675 aa11.57□□□□□ -0.56
USF1-204ENST00000472217 FLIIQ13045 1269 aa11.57□□□□□ -0.56
USF1-204ENST00000472217 CCDC152Q4G0S7 254 aa11.57□□□□□ -0.56
USF1-204ENST00000472217 NSFL1CQ9UNZ2 370 aaKnown RBP11.57□□□□□ -0.56
USF1-204ENST00000472217 CLEC11AQ9Y240 323 aa11.57□□□□□ -0.56
USF1-204ENST00000472217 YDJCA8MPS7 323 aa11.56□□□□□ -0.56
USF1-204ENST00000472217 NEURL1BA8MQ27 555 aa11.56□□□□□ -0.56
USF1-204ENST00000472217 VAMP4O75379 141 aa11.56□□□□□ -0.56
USF1-204ENST00000472217 ITGBL1O95965 494 aaPredicted RBP11.56□□□□□ -0.56
USF1-204ENST00000472217 WASHC4Q2M389 1173 aa11.56□□□□□ -0.56
USF1-204ENST00000472217 MAP1SQ66K74 1059 aaPredicted RBP11.56□□□□□ -0.56
USF1-204ENST00000472217 CIAPIN1Q6FI81 312 aa11.56□□□□□ -0.56
USF1-204ENST00000472217 CCDC85AQ96PX6 553 aaPredicted RBP11.56□□□□□ -0.56
USF1-204ENST00000472217 CREBZFQ9NS37 354 aa11.56□□□□□ -0.56
USF1-204ENST00000472217 POLLQ9UGP5 575 aa11.56□□□□□ -0.56
USF1-204ENST00000472217 MYH3P11055 1940 aa11.56□□□□□ -0.56
USF1-204ENST00000472217 C6orf229H3BNL8 230 aa11.55□□□□□ -0.56
USF1-204ENST00000472217 RAD17O75943 681 aa11.55□□□□□ -0.56
USF1-204ENST00000472217 GMPSP49915 693 aaPredicted RBP11.55□□□□□ -0.56
USF1-204ENST00000472217 CTSWP56202 376 aa11.55□□□□□ -0.56
USF1-204ENST00000472217 FKBP5Q13451 457 aaPredicted RBP11.55□□□□□ -0.56
USF1-204ENST00000472217 GPR101Q96P66 508 aaPredicted RBP11.55□□□□□ -0.56
USF1-204ENST00000472217 MYH16Q9H6N6 1097 aa11.55□□□□□ -0.56
USF1-204ENST00000472217 GPRC5DQ9NZD1 345 aa11.55□□□□□ -0.56
USF1-204ENST00000472217 SPEF2Q9C093 1822 aa11.55□□□□□ -0.56
USF1-204ENST00000472217 CACNA1FO60840 1977 aa11.54□□□□□ -0.56
USF1-204ENST00000472217 RIMBP2O15034 1052 aa11.54□□□□□ -0.56
USF1-204ENST00000472217 USP50Q70EL3 339 aaPredicted RBP11.54□□□□□ -0.56
USF1-204ENST00000472217 UBE3BQ7Z3V4 1068 aa11.54□□□□□ -0.56
USF1-204ENST00000472217 CNTROBQ8N137 903 aa11.54□□□□□ -0.56
USF1-204ENST00000472217 TBC1D16Q8TBP0 767 aa11.54□□□□□ -0.56
USF1-204ENST00000472217 DNAAF4Q8WXU2 420 aa11.54□□□□□ -0.56
USF1-204ENST00000472217 DBNDD1Q9H9R9 158 aa11.54□□□□□ -0.56
USF1-204ENST00000472217 PODXL2Q9NZ53 605 aa11.54□□□□□ -0.56
USF1-204ENST00000472217 ZNF521Q96K83 1311 aa11.54□□□□□ -0.56
USF1-204ENST00000472217 H7C1W4 665 aa11.53□□□□□ -0.56
USF1-204ENST00000472217 GCKRQ14397 625 aa11.53□□□□□ -0.56
USF1-204ENST00000472217 TNIP1Q15025 636 aa11.53□□□□□ -0.56
USF1-204ENST00000472217 ANKRD18AQ8IVF6 992 aa11.53□□□□□ -0.56
USF1-204ENST00000472217 LINS1Q8NG48 757 aa11.53□□□□□ -0.56
USF1-204ENST00000472217 TTLL11Q8NHH1 800 aa11.53□□□□□ -0.56
USF1-204ENST00000472217 EYA3Q99504 573 aa11.53□□□□□ -0.56
USF1-204ENST00000472217 BCL2L13Q9BXK5 485 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms