RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 TNRC6CQ9HCJ0 1690 aaKnown RBP15.51■□□□□ 0.07
PRKCB-205ENST00000472066 YBX3P16989 372 aaKnown RBP eCLIP15.51■□□□□ 0.073e-9■□□□□ 9.9
PRKCB-205ENST00000472066 CCDC152Q4G0S7 254 aa15.51■□□□□ 0.07
PRKCB-205ENST00000472066 EPHA10Q5JZY3 1008 aa15.51■□□□□ 0.07
PRKCB-205ENST00000472066 PRPF40BQ6NWY9 871 aaKnown RBP15.51■□□□□ 0.07
PRKCB-205ENST00000472066 KAZALD1Q96I82 304 aa15.51■□□□□ 0.07
PRKCB-205ENST00000472066 CCDC85AQ96PX6 553 aaPredicted RBP15.51■□□□□ 0.07
PRKCB-205ENST00000472066 N4BP2Q86UW6 1770 aaPredicted RBP15.5■□□□□ 0.07
PRKCB-205ENST00000472066 UBTFL1P0CB47 393 aaPredicted RBP15.5■□□□□ 0.07
PRKCB-205ENST00000472066 PDE3AQ14432 1141 aa15.5■□□□□ 0.07
PRKCB-205ENST00000472066 MEIS3Q99687 375 aa15.5■□□□□ 0.07
PRKCB-205ENST00000472066 GOLGB1Q14789 3259 aaKnown RBP15.49■□□□□ 0.07
PRKCB-205ENST00000472066 DCAF8L1A6NGE4 600 aa15.49■□□□□ 0.07
PRKCB-205ENST00000472066 BBOX1O75936 387 aa15.49■□□□□ 0.07
PRKCB-205ENST00000472066 GNAI3P08754 354 aa15.49■□□□□ 0.07
PRKCB-205ENST00000472066 RRP1P56182 461 aaKnown RBP15.49■□□□□ 0.07
PRKCB-205ENST00000472066 GRAPQ13588 217 aa15.49■□□□□ 0.07
PRKCB-205ENST00000472066 C20orf194Q5TEA3 1177 aa15.49■□□□□ 0.07
PRKCB-205ENST00000472066 LMBR1LQ6UX01 489 aa15.49■□□□□ 0.07
PRKCB-205ENST00000472066 ITPRIPQ8IWB1 547 aa15.49■□□□□ 0.07
PRKCB-205ENST00000472066 GRAPLQ8TC17 118 aaPredicted RBP15.49■□□□□ 0.07
PRKCB-205ENST00000472066 C7orf43Q8WVR3 580 aa15.49■□□□□ 0.07
PRKCB-205ENST00000472066 GREM2Q9H772 168 aa15.49■□□□□ 0.07
PRKCB-205ENST00000472066 SEC31BQ9NQW1 1179 aa15.49■□□□□ 0.07
PRKCB-205ENST00000472066 ZBTB7BO15156 539 aaPredicted RBP15.48■□□□□ 0.07
PRKCB-205ENST00000472066 C21orf2O43822 256 aa15.48■□□□□ 0.07
PRKCB-205ENST00000472066 CELF1Q92879 486 aaKnown RBP15.48■□□□□ 0.07
PRKCB-205ENST00000472066 BICC1Q9H694 974 aaKnown RBP15.48■□□□□ 0.07
PRKCB-205ENST00000472066 ZNF219Q9P2Y4 722 aaPredicted RBP15.48■□□□□ 0.07
PRKCB-205ENST00000472066 HDAC5Q9UQL6 1122 aa15.48■□□□□ 0.07
PRKCB-205ENST00000472066 COL11A2P13942 1736 aaPredicted RBP15.48■□□□□ 0.07
PRKCB-205ENST00000472066 DDX60Q8IY21 1712 aaKnown RBP15.48■□□□□ 0.07
PRKCB-205ENST00000472066 PPEF1O14829 653 aaPredicted RBP15.47■□□□□ 0.07
PRKCB-205ENST00000472066 GRIN3BO60391 1043 aa15.47■□□□□ 0.07
PRKCB-205ENST00000472066 RPS8P62241 208 aaKnown RBP15.47■□□□□ 0.07
PRKCB-205ENST00000472066 MVPQ14764 893 aaKnown RBP15.47■□□□□ 0.07
PRKCB-205ENST00000472066 RABL6Q3YEC7 729 aaPredicted RBP15.47■□□□□ 0.07
PRKCB-205ENST00000472066 ANKRD44Q8N8A2 993 aa15.47■□□□□ 0.07
PRKCB-205ENST00000472066 COG6Q9Y2V7 657 aa15.47■□□□□ 0.07
PRKCB-205ENST00000472066 RTL9Q8NET4 1388 aa15.47■□□□□ 0.07
PRKCB-205ENST00000472066 ITGA6P23229 1130 aa15.46■□□□□ 0.07
PRKCB-205ENST00000472066 FAM161AQ3B820 660 aa15.46■□□□□ 0.07
PRKCB-205ENST00000472066 CHMP3Q9Y3E7 222 aa15.46■□□□□ 0.07
PRKCB-205ENST00000472066 LRRFIP2Q9Y608 721 aaKnown RBP15.46■□□□□ 0.07
PRKCB-205ENST00000472066 ANKRD18BA2A2Z9 1011 aa15.45■□□□□ 0.06
PRKCB-205ENST00000472066 IFIT5Q13325 482 aaKnown RBP15.45■□□□□ 0.06
PRKCB-205ENST00000472066 OLFM4Q6UX06 510 aa15.45■□□□□ 0.06
PRKCB-205ENST00000472066 ARHGAP27Q6ZUM4 889 aa15.45■□□□□ 0.06
PRKCB-205ENST00000472066 TMC4Q7Z404 712 aa15.45■□□□□ 0.06
PRKCB-205ENST00000472066 ANKRD18AQ8IVF6 992 aa15.45■□□□□ 0.06
PRKCB-205ENST00000472066 SP8Q8IXZ3 490 aa15.45■□□□□ 0.06
PRKCB-205ENST00000472066 CDC5LQ99459 802 aaKnown RBP15.45■□□□□ 0.06
PRKCB-205ENST00000472066 DDX19BQ9UMR2 479 aa15.45■□□□□ 0.06
PRKCB-205ENST00000472066 ATP6V0A2Q9Y487 856 aa15.45■□□□□ 0.06
PRKCB-205ENST00000472066 SUPT16HQ9Y5B9 1047 aaKnown RBP15.45■□□□□ 0.06
PRKCB-205ENST00000472066 DLEC1Q9Y238 1755 aa15.44■□□□□ 0.06
PRKCB-205ENST00000472066 GNAI2P04899 355 aa15.44■□□□□ 0.06
PRKCB-205ENST00000472066 CCDC57Q2TAC2 916 aa15.44■□□□□ 0.06
PRKCB-205ENST00000472066 SOGA3Q5TF21 947 aa15.44■□□□□ 0.06
PRKCB-205ENST00000472066 LAMB2P55268 1798 aa15.44■□□□□ 0.06
PRKCB-205ENST00000472066 CCDC93Q567U6 631 aa15.43■□□□□ 0.06
PRKCB-205ENST00000472066 CC2D2BQ6DHV5 1058 aa15.43■□□□□ 0.06
PRKCB-205ENST00000472066 SLC51AQ86UW1 340 aa15.43■□□□□ 0.06
PRKCB-205ENST00000472066 RTKN2Q8IZC4 609 aa15.43■□□□□ 0.06
PRKCB-205ENST00000472066 TMX4Q9H1E5 349 aaPredicted RBP15.43■□□□□ 0.06
PRKCB-205ENST00000472066 IGHMBP2P38935 993 aaKnown RBP15.42■□□□□ 0.06
PRKCB-205ENST00000472066 GRIPAP1Q4V328 841 aa15.42■□□□□ 0.06
PRKCB-205ENST00000472066 BSDC1Q9NW68 430 aaPredicted RBP15.42■□□□□ 0.06
PRKCB-205ENST00000472066 BRCA1P38398 1863 aaKnown RBP15.42■□□□□ 0.06
PRKCB-205ENST00000472066 SLX4Q8IY92 1834 aa15.41■□□□□ 0.06
PRKCB-205ENST00000472066 UTRNP46939 3433 aa15.41■□□□□ 0.06
PRKCB-205ENST00000472066 TAF7LQ5H9L4 462 aa15.41■□□□□ 0.06
PRKCB-205ENST00000472066 ZNF594Q96JF6 807 aaPredicted RBP15.41■□□□□ 0.06
PRKCB-205ENST00000472066 MPHOSPH8Q99549 860 aa15.41■□□□□ 0.06
PRKCB-205ENST00000472066 CHMP4BQ9H444 224 aaKnown RBP15.41■□□□□ 0.06
PRKCB-205ENST00000472066 ZBTB40Q9NUA8 1239 aa15.41■□□□□ 0.06
PRKCB-205ENST00000472066 COL4A1P02462 1669 aa15.41■□□□□ 0.06
PRKCB-205ENST00000472066 NFKBIEO00221 500 aa15.4■□□□□ 0.06
PRKCB-205ENST00000472066 RFX5P48382 616 aaPredicted RBP15.4■□□□□ 0.06
PRKCB-205ENST00000472066 MTX1Q13505 466 aa15.4■□□□□ 0.06
PRKCB-205ENST00000472066 C1orf115Q9H7X2 142 aa15.4■□□□□ 0.06
PRKCB-205ENST00000472066 MINPP1Q9UNW1 487 aa15.4■□□□□ 0.06
PRKCB-205ENST00000472066 GPSM2P81274 684 aa15.39■□□□□ 0.05
PRKCB-205ENST00000472066 FKBP4Q02790 459 aaKnown RBP eCLIP15.39■□□□□ 0.05
PRKCB-205ENST00000472066 LDHAL6AQ6ZMR3 332 aa15.39■□□□□ 0.05
PRKCB-205ENST00000472066 MPNDQ8N594 471 aa15.39■□□□□ 0.05
PRKCB-205ENST00000472066 SNED1Q8TER0 1413 aa15.38■□□□□ 0.05
PRKCB-205ENST00000472066 SRGAP3O43295 1099 aa15.38■□□□□ 0.05
PRKCB-205ENST00000472066 ATP8B2P98198 1209 aa15.38■□□□□ 0.05
PRKCB-205ENST00000472066 RASSF7Q02833 373 aa15.38■□□□□ 0.05
PRKCB-205ENST00000472066 PTPN12Q05209 780 aaKnown RBP15.38■□□□□ 0.05
PRKCB-205ENST00000472066 DPP8Q6V1X1 898 aaPredicted RBP15.38■□□□□ 0.05
PRKCB-205ENST00000472066 KLHDC4Q8TBB5 520 aa15.38■□□□□ 0.05
PRKCB-205ENST00000472066 PSMD1Q99460 953 aa15.38■□□□□ 0.05
PRKCB-205ENST00000472066 TAOK3Q9H2K8 898 aa15.38■□□□□ 0.05
PRKCB-205ENST00000472066 NSFL1CQ9UNZ2 370 aaKnown RBP15.38■□□□□ 0.05
PRKCB-205ENST00000472066 LTBP3Q9NS15 1303 aa15.38■□□□□ 0.05
PRKCB-205ENST00000472066 PNMA6EA0A0J9YXQ4 647 aa15.37■□□□□ 0.05
PRKCB-205ENST00000472066 PRELPP51888 382 aa15.37■□□□□ 0.05
PRKCB-205ENST00000472066 CRBNQ96SW2 442 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms