RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 BCS1LQ9Y276 419 aa21.63■■□□□ 1.05
HSPG2-208ENST00000471322 ARFGEF2Q9Y6D5 1785 aa21.63■■□□□ 1.05
HSPG2-208ENST00000471322 PPP1R42Q7Z4L9 355 aa21.62■■□□□ 1.05
HSPG2-208ENST00000471322 UTP14AQ9BVJ6 771 aaKnown RBP21.62■■□□□ 1.05
HSPG2-208ENST00000471322 C9orf78Q9NZ63 289 aaPredicted RBP21.62■■□□□ 1.05
HSPG2-208ENST00000471322 ANKRD31Q8N7Z5 1873 aa21.62■■□□□ 1.05
HSPG2-208ENST00000471322 H0YIN7 160 aa21.62■■□□□ 1.05
HSPG2-208ENST00000471322 ISCA1Q9BUE6 129 aa21.62■■□□□ 1.05
HSPG2-208ENST00000471322 METTL22Q9BUU2 404 aaPredicted RBP21.62■■□□□ 1.05
HSPG2-208ENST00000471322 TRMT112Q9UI30 125 aaKnown RBP21.62■■□□□ 1.05
HSPG2-208ENST00000471322 PDE6BP35913 854 aa21.61■■□□□ 1.05
HSPG2-208ENST00000471322 ZNF622Q969S3 477 aaKnown RBP eCLIP21.61■■□□□ 1.05
HSPG2-208ENST00000471322 ANKRD36CQ5JPF3 1778 aa21.6■■□□□ 1.05
HSPG2-208ENST00000471322 SSH3Q8TE77 659 aa21.6■■□□□ 1.05
HSPG2-208ENST00000471322 JARID2Q92833 1246 aaPredicted RBP21.6■■□□□ 1.05
HSPG2-208ENST00000471322 FAM89AQ96GI7 184 aa21.6■■□□□ 1.05
HSPG2-208ENST00000471322 PIM2Q9P1W9 311 aa21.6■■□□□ 1.05
HSPG2-208ENST00000471322 UTYO14607 1347 aa21.59■■□□□ 1.05
HSPG2-208ENST00000471322 NBPF7P0C2Y1 421 aaPredicted RBP21.59■■□□□ 1.05
HSPG2-208ENST00000471322 BMP2KLQ5H9B9 411 aa21.59■■□□□ 1.05
HSPG2-208ENST00000471322 HCLS1P14317 486 aaPredicted RBP21.58■■□□□ 1.05
HSPG2-208ENST00000471322 CWF19L2Q2TBE0 894 aaKnown RBP21.58■■□□□ 1.05
HSPG2-208ENST00000471322 C3orf67Q6ZVT6 689 aa21.58■■□□□ 1.05
HSPG2-208ENST00000471322 GRM8O00222 908 aa21.58■■□□□ 1.04
HSPG2-208ENST00000471322 IGKV5-2P06315 115 aa21.58■■□□□ 1.04
HSPG2-208ENST00000471322 PNMA6EA0A0J9YXQ4 647 aa21.57■■□□□ 1.04
HSPG2-208ENST00000471322 SRGNP10124 158 aa21.57■■□□□ 1.04
HSPG2-208ENST00000471322 MTX1Q13505 466 aa21.57■■□□□ 1.04
HSPG2-208ENST00000471322 POLA2Q14181 598 aa21.57■■□□□ 1.04
HSPG2-208ENST00000471322 DALRD3Q5D0E6 543 aaKnown RBP21.57■■□□□ 1.04
HSPG2-208ENST00000471322 COL11A2P13942 1736 aaPredicted RBP21.57■■□□□ 1.04
HSPG2-208ENST00000471322 TNRC6CQ9HCJ0 1690 aaKnown RBP21.57■■□□□ 1.04
HSPG2-208ENST00000471322 RAB11FIP3O75154 756 aa21.56■■□□□ 1.04
HSPG2-208ENST00000471322 ZNF219Q9P2Y4 722 aaPredicted RBP21.56■■□□□ 1.04
HSPG2-208ENST00000471322 SH3TC1Q8TE82 1336 aa21.56■■□□□ 1.04
HSPG2-208ENST00000471322 NEURL1BA8MQ27 555 aa21.55■■□□□ 1.04
HSPG2-208ENST00000471322 HSP90AB4PQ58FF6 505 aa21.55■■□□□ 1.04
HSPG2-208ENST00000471322 UPF2Q9HAU5 1272 aaKnown RBP21.55■■□□□ 1.04
HSPG2-208ENST00000471322 TRIM28Q13263 835 aaKnown RBP21.55■■□□□ 1.04
HSPG2-208ENST00000471322 PLEKHM2Q8IWE5 1019 aa21.55■■□□□ 1.04
HSPG2-208ENST00000471322 TTLL6Q8N841 843 aa21.55■■□□□ 1.04
HSPG2-208ENST00000471322 LRRCC1Q9C099 1032 aa21.55■■□□□ 1.04
HSPG2-208ENST00000471322 CWC25Q9NXE8 425 aaPredicted RBP21.55■■□□□ 1.04
HSPG2-208ENST00000471322 BRCA1P38398 1863 aaKnown RBP21.54■■□□□ 1.04
HSPG2-208ENST00000471322 SRGAP3O43295 1099 aa21.54■■□□□ 1.04
HSPG2-208ENST00000471322 GCKRQ14397 625 aa21.54■■□□□ 1.04
HSPG2-208ENST00000471322 CCDC191Q8NCU4 936 aa21.54■■□□□ 1.04
HSPG2-208ENST00000471322 EIF5BO60841 1220 aaKnown RBP21.53■■□□□ 1.04
HSPG2-208ENST00000471322 MASTLQ96GX5 879 aa21.53■■□□□ 1.04
HSPG2-208ENST00000471322 IPO9Q96P70 1041 aaKnown RBP21.53■■□□□ 1.04
HSPG2-208ENST00000471322 EXOC6BQ9Y2D4 811 aa21.53■■□□□ 1.04
HSPG2-208ENST00000471322 KLRG2A4D1S0 409 aaPredicted RBP21.52■■□□□ 1.04
HSPG2-208ENST00000471322 NLRP3Q96P20 1036 aa21.52■■□□□ 1.04
HSPG2-208ENST00000471322 GRIN3BO60391 1043 aa21.51■■□□□ 1.03
HSPG2-208ENST00000471322 NPR1P16066 1061 aa21.51■■□□□ 1.03
HSPG2-208ENST00000471322 ZBTB38Q8NAP3 1195 aaPredicted RBP21.51■■□□□ 1.03
HSPG2-208ENST00000471322 DDRGK1Q96HY6 314 aa21.51■■□□□ 1.03
HSPG2-208ENST00000471322 APBB1O00213 710 aa21.51■■□□□ 1.03
HSPG2-208ENST00000471322 IRS4O14654 1257 aaPredicted RBP21.51■■□□□ 1.03
HSPG2-208ENST00000471322 SLC10A5Q5PT55 438 aa21.51■■□□□ 1.03
HSPG2-208ENST00000471322 PRPF40BQ6NWY9 871 aaKnown RBP21.51■■□□□ 1.03
HSPG2-208ENST00000471322 ARHGAP27Q6ZUM4 889 aa21.51■■□□□ 1.03
HSPG2-208ENST00000471322 RPGRQ92834 1020 aaKnown RBP21.51■■□□□ 1.03
HSPG2-208ENST00000471322 C21orf2O43822 256 aa21.5■■□□□ 1.03
HSPG2-208ENST00000471322 SURF6O75683 361 aaKnown RBP21.5■■□□□ 1.03
HSPG2-208ENST00000471322 CRY2Q49AN0 593 aa21.5■■□□□ 1.03
HSPG2-208ENST00000471322 STYK1Q6J9G0 422 aa21.5■■□□□ 1.03
HSPG2-208ENST00000471322 NOP58Q9Y2X3 529 aaKnown RBP21.5■■□□□ 1.03
HSPG2-208ENST00000471322 DLEC1Q9Y238 1755 aa21.5■■□□□ 1.03
HSPG2-208ENST00000471322 SMARCA5O60264 1052 aaPredicted RBP21.49■■□□□ 1.03
HSPG2-208ENST00000471322 SLC51AQ86UW1 340 aa21.49■■□□□ 1.03
HSPG2-208ENST00000471322 C16orf71Q8IYS4 520 aaPredicted RBP21.49■■□□□ 1.03
HSPG2-208ENST00000471322 OSBPL3Q9H4L5 887 aa21.49■■□□□ 1.03
HSPG2-208ENST00000471322 PCCAP05165 728 aaPredicted RBP21.48■■□□□ 1.03
HSPG2-208ENST00000471322 TTC22Q5TAA0 569 aa21.48■■□□□ 1.03
HSPG2-208ENST00000471322 OLFM4Q6UX06 510 aa21.48■■□□□ 1.03
HSPG2-208ENST00000471322 UBE3BQ7Z3V4 1068 aa21.48■■□□□ 1.03
HSPG2-208ENST00000471322 CNKSR1Q969H4 720 aa21.48■■□□□ 1.03
HSPG2-208ENST00000471322 CACNA1SQ13698 1873 aa21.48■■□□□ 1.03
HSPG2-208ENST00000471322 KIF1BPQ96EK5 621 aa21.47■■□□□ 1.03
HSPG2-208ENST00000471322 SUCLG2Q96I99 432 aa21.47■■□□□ 1.03
HSPG2-208ENST00000471322 CCDC85AQ96PX6 553 aaPredicted RBP21.47■■□□□ 1.03
HSPG2-208ENST00000471322 SLX4Q8IY92 1834 aa21.47■■□□□ 1.03
HSPG2-208ENST00000471322 RIC1Q4ADV7 1423 aa21.46■■□□□ 1.03
HSPG2-208ENST00000471322 SEC24BO95487 1268 aa21.46■■□□□ 1.03
HSPG2-208ENST00000471322 ERC1Q8IUD2 1116 aa21.46■■□□□ 1.03
HSPG2-208ENST00000471322 DDX60Q8IY21 1712 aaKnown RBP21.45■■□□□ 1.02
HSPG2-208ENST00000471322 RBM17Q96I25 401 aaKnown RBP21.45■■□□□ 1.02
HSPG2-208ENST00000471322 BICC1Q9H694 974 aaKnown RBP21.45■■□□□ 1.02
HSPG2-208ENST00000471322 ALDH1B1P30837 517 aa21.44■■□□□ 1.02
HSPG2-208ENST00000471322 KAZALD1Q96I82 304 aa21.44■■□□□ 1.02
HSPG2-208ENST00000471322 CDC45O75419 566 aa21.44■■□□□ 1.02
HSPG2-208ENST00000471322 HOXA10P31260 410 aaPredicted RBP21.44■■□□□ 1.02
HSPG2-208ENST00000471322 PDE1AP54750 535 aa21.44■■□□□ 1.02
HSPG2-208ENST00000471322 RASSF7Q02833 373 aa21.44■■□□□ 1.02
HSPG2-208ENST00000471322 RHPN1Q8TCX5 695 aa21.44■■□□□ 1.02
HSPG2-208ENST00000471322 STAP2Q9UGK3 403 aa21.44■■□□□ 1.02
HSPG2-208ENST00000471322 LAMB2P55268 1798 aa21.43■■□□□ 1.02
HSPG2-208ENST00000471322 H7C1W4 665 aa21.43■■□□□ 1.02
HSPG2-208ENST00000471322 OS9Q13438 667 aaPredicted RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms