RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 SP8Q8IXZ3 490 aa20.06■□□□□ 0.8
HDAC6-218ENST00000470942 SNED1Q8TER0 1413 aa20.06■□□□□ 0.8
HDAC6-218ENST00000470942 VEGFAP15692 232 aaPredicted RBP20.05■□□□□ 0.8
HDAC6-218ENST00000470942 CWF19L2Q2TBE0 894 aaKnown RBP20.05■□□□□ 0.8
HDAC6-218ENST00000470942 JDP2Q8WYK2 163 aa20.05■□□□□ 0.8
HDAC6-218ENST00000470942 E9PSI1 815 aa20.04■□□□□ 0.8
HDAC6-218ENST00000470942 PDE8AO60658 829 aa20.04■□□□□ 0.8
HDAC6-218ENST00000470942 DDNO94850 711 aaPredicted RBP20.04■□□□□ 0.8
HDAC6-218ENST00000470942 DNAAF4Q8WXU2 420 aa20.04■□□□□ 0.8
HDAC6-218ENST00000470942 WDR90Q96KV7 1748 aa20.03■□□□□ 0.8
HDAC6-218ENST00000470942 NEURL1BA8MQ27 555 aa20.03■□□□□ 0.8
HDAC6-218ENST00000470942 DPP8Q6V1X1 898 aaPredicted RBP20.03■□□□□ 0.8
HDAC6-218ENST00000470942 TMC4Q7Z404 712 aa20.03■□□□□ 0.8
HDAC6-218ENST00000470942 LARGE2Q8N3Y3 721 aa20.03■□□□□ 0.8
HDAC6-218ENST00000470942 MPNDQ8N594 471 aa20.03■□□□□ 0.8
HDAC6-218ENST00000470942 CELF1Q92879 486 aaKnown RBP20.03■□□□□ 0.8
HDAC6-218ENST00000470942 CCDC152Q4G0S7 254 aa20.02■□□□□ 0.8
HDAC6-218ENST00000470942 MIER1Q8N108 512 aa20.02■□□□□ 0.8
HDAC6-218ENST00000470942 SUPT20HQ8NEM7 779 aa20.02■□□□□ 0.8
HDAC6-218ENST00000470942 RBM46Q8TBY0 533 aaKnown RBP20.02■□□□□ 0.8
HDAC6-218ENST00000470942 CCDC85AQ96PX6 553 aaPredicted RBP20.02■□□□□ 0.8
HDAC6-218ENST00000470942 CDHR2Q9BYE9 1310 aa20.02■□□□□ 0.79
HDAC6-218ENST00000470942 SLFN5Q08AF3 891 aa20.01■□□□□ 0.79
HDAC6-218ENST00000470942 MYH3P11055 1940 aa20.01■□□□□ 0.79
HDAC6-218ENST00000470942 ZNF541Q9H0D2 1346 aa20.01■□□□□ 0.79
HDAC6-218ENST00000470942 POTECB2RU33 542 aa20■□□□□ 0.79
HDAC6-218ENST00000470942 FZD9O00144 591 aa20■□□□□ 0.79
HDAC6-218ENST00000470942 PPIP5K2O43314 1243 aa20■□□□□ 0.79
HDAC6-218ENST00000470942 RPS8P62241 208 aaKnown RBP20■□□□□ 0.79
HDAC6-218ENST00000470942 CDCA7LQ96GN5 454 aa20■□□□□ 0.79
HDAC6-218ENST00000470942 SEC31BQ9NQW1 1179 aa20■□□□□ 0.79
HDAC6-218ENST00000470942 F6X3S4 739 aa19.99■□□□□ 0.79
HDAC6-218ENST00000470942 EIF6P56537 245 aaKnown RBP19.99■□□□□ 0.79
HDAC6-218ENST00000470942 GCKRQ14397 625 aa19.99■□□□□ 0.79
HDAC6-218ENST00000470942 AOC3Q16853 763 aa19.99■□□□□ 0.79
HDAC6-218ENST00000470942 UBE3BQ7Z3V4 1068 aa19.99■□□□□ 0.79
HDAC6-218ENST00000470942 NIM1KQ8IY84 436 aa19.99■□□□□ 0.79
HDAC6-218ENST00000470942 LINS1Q8NG48 757 aa19.99■□□□□ 0.79
HDAC6-218ENST00000470942 COL4A1P02462 1669 aa19.98■□□□□ 0.79
HDAC6-218ENST00000470942 COL4A5P29400 1685 aa19.98■□□□□ 0.79
HDAC6-218ENST00000470942 H7C1W4 665 aa19.98■□□□□ 0.79
HDAC6-218ENST00000470942 HSPA6P17066 643 aa19.98■□□□□ 0.79
HDAC6-218ENST00000470942 RTFDC1Q9BY42 306 aaPredicted RBP19.98■□□□□ 0.79
HDAC6-218ENST00000470942 VPS33BQ9H267 617 aa19.98■□□□□ 0.79
HDAC6-218ENST00000470942 NSFL1CQ9UNZ2 370 aaKnown RBP19.98■□□□□ 0.79
HDAC6-218ENST00000470942 LRRC37AA6NMS7 1700 aa19.98■□□□□ 0.79
HDAC6-218ENST00000470942 CTSWP56202 376 aa19.97■□□□□ 0.79
HDAC6-218ENST00000470942 GJA3Q9Y6H8 435 aa19.97■□□□□ 0.79
HDAC6-218ENST00000470942 SCN4AP35499 1836 aa19.97■□□□□ 0.79
HDAC6-218ENST00000470942 FSTL1Q12841 308 aa19.96■□□□□ 0.79
HDAC6-218ENST00000470942 SMC1BQ8NDV3 1235 aa19.96■□□□□ 0.79
HDAC6-218ENST00000470942 IQCA1LA6NCM1 817 aa19.95■□□□□ 0.78
HDAC6-218ENST00000470942 GPSM2P81274 684 aa19.95■□□□□ 0.78
HDAC6-218ENST00000470942 BEND3Q5T5X7 828 aa19.95■□□□□ 0.78
HDAC6-218ENST00000470942 SLC4A10Q6U841 1118 aa19.95■□□□□ 0.78
HDAC6-218ENST00000470942 ANKRD18AQ8IVF6 992 aa19.95■□□□□ 0.78
HDAC6-218ENST00000470942 GPC2Q8N158 579 aa19.95■□□□□ 0.78
HDAC6-218ENST00000470942 MRPL50Q8N5N7 158 aaKnown RBP19.95■□□□□ 0.78
HDAC6-218ENST00000470942 TTLL11Q8NHH1 800 aa19.95■□□□□ 0.78
HDAC6-218ENST00000470942 L3MBTL3Q96JM7 780 aaPredicted RBP19.95■□□□□ 0.78
HDAC6-218ENST00000470942 C6orf229H3BNL8 230 aa19.94■□□□□ 0.78
HDAC6-218ENST00000470942 SPEF2Q9C093 1822 aa19.94■□□□□ 0.78
HDAC6-218ENST00000470942 KIAA2012Q0VF49 1180 aa19.93■□□□□ 0.78
HDAC6-218ENST00000470942 CDC5LQ99459 802 aaKnown RBP19.93■□□□□ 0.78
HDAC6-218ENST00000470942 GREM2Q9H772 168 aa19.93■□□□□ 0.78
HDAC6-218ENST00000470942 HACL1Q9UJ83 578 aa19.93■□□□□ 0.78
HDAC6-218ENST00000470942 ZNRF3Q9ULT6 936 aa19.93■□□□□ 0.78
HDAC6-218ENST00000470942 DUOX1Q9NRD9 1551 aa19.92■□□□□ 0.78
HDAC6-218ENST00000470942 RIMBP2O15034 1052 aa19.92■□□□□ 0.78
HDAC6-218ENST00000470942 CASP7P55210 303 aa19.92■□□□□ 0.78
HDAC6-218ENST00000470942 WASHC4Q2M389 1173 aa19.92■□□□□ 0.78
HDAC6-218ENST00000470942 TRMT2AQ8IZ69 625 aaKnown RBP19.92■□□□□ 0.78
HDAC6-218ENST00000470942 SSH1Q8WYL5 1049 aa19.92■□□□□ 0.78
HDAC6-218ENST00000470942 PLA2G12BQ9BX93 195 aa19.92■□□□□ 0.78
HDAC6-218ENST00000470942 ANKIB1Q9P2G1 1089 aa19.92■□□□□ 0.78
HDAC6-218ENST00000470942 EYA3Q99504 573 aa19.91■□□□□ 0.78
HDAC6-218ENST00000470942 BCL2L13Q9BXK5 485 aa19.91■□□□□ 0.78
HDAC6-218ENST00000470942 SRCIN1Q9C0H9 1055 aa19.91■□□□□ 0.78
HDAC6-218ENST00000470942 TAF1DQ9H5J8 278 aaPredicted RBP19.91■□□□□ 0.78
HDAC6-218ENST00000470942 POLLQ9UGP5 575 aa19.91■□□□□ 0.78
HDAC6-218ENST00000470942 APLP1P51693 650 aa19.9■□□□□ 0.78
HDAC6-218ENST00000470942 EAPPQ56P03 285 aaPredicted RBP19.9■□□□□ 0.78
HDAC6-218ENST00000470942 TBC1D16Q8TBP0 767 aa19.9■□□□□ 0.78
HDAC6-218ENST00000470942 C9orf78Q9NZ63 289 aaPredicted RBP19.9■□□□□ 0.78
HDAC6-218ENST00000470942 ALDH1L1O75891 902 aa19.89■□□□□ 0.77
HDAC6-218ENST00000470942 UFL1O94874 794 aa19.89■□□□□ 0.77
HDAC6-218ENST00000470942 POTEIP0CG38 1075 aa19.89■□□□□ 0.77
HDAC6-218ENST00000470942 POTEJP0CG39 1038 aa19.89■□□□□ 0.77
HDAC6-218ENST00000470942 LMOD1P29536 600 aaPredicted RBP19.89■□□□□ 0.77
HDAC6-218ENST00000470942 EPHX2P34913 555 aa19.89■□□□□ 0.77
HDAC6-218ENST00000470942 CXCL9Q07325 125 aa19.89■□□□□ 0.77
HDAC6-218ENST00000470942 LTBP1Q14766 1721 aa19.89■□□□□ 0.77
HDAC6-218ENST00000470942 ALDH1L2Q3SY69 923 aa19.89■□□□□ 0.77
HDAC6-218ENST00000470942 RTL9Q8NET4 1388 aa19.89■□□□□ 0.77
HDAC6-218ENST00000470942 GPR101Q96P66 508 aaPredicted RBP19.89■□□□□ 0.77
HDAC6-218ENST00000470942 GGA1Q9UJY5 639 aa19.89■□□□□ 0.77
HDAC6-218ENST00000470942 PTPRCP08575 1304 aa19.88■□□□□ 0.77
HDAC6-218ENST00000470942 GRM8O00222 908 aa19.88■□□□□ 0.77
HDAC6-218ENST00000470942 RAD17O75943 681 aa19.88■□□□□ 0.77
HDAC6-218ENST00000470942 ITGA6P23229 1130 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms