RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 PHLPP1O60346 1717 aa16.18■□□□□ 0.18
NPHP4-207ENST00000470763 CYP2C19P33261 490 aa16.18■□□□□ 0.18
NPHP4-207ENST00000470763 CHMP4AQ9BY43 222 aa16.18■□□□□ 0.18
NPHP4-207ENST00000470763 BECN2A8MW95 431 aa16.18■□□□□ 0.18
NPHP4-207ENST00000470763 TULP2O00295 520 aa16.18■□□□□ 0.18
NPHP4-207ENST00000470763 ZKSCAN1P17029 563 aaPredicted RBP16.18■□□□□ 0.18
NPHP4-207ENST00000470763 BRINP3Q76B58 766 aa16.18■□□□□ 0.18
NPHP4-207ENST00000470763 PDCP20941 246 aa16.17■□□□□ 0.18
NPHP4-207ENST00000470763 CLCN6P51797 869 aa16.17■□□□□ 0.18
NPHP4-207ENST00000470763 BMS1Q14692 1282 aaKnown RBP16.17■□□□□ 0.18
NPHP4-207ENST00000470763 SLFNL1Q499Z3 407 aa16.17■□□□□ 0.18
NPHP4-207ENST00000470763 CCDC30Q5VVM6 783 aa16.17■□□□□ 0.18
NPHP4-207ENST00000470763 RBM8AQ9Y5S9 174 aaKnown RBP16.17■□□□□ 0.18
NPHP4-207ENST00000470763 FHOD1Q9Y613 1164 aa16.17■□□□□ 0.18
NPHP4-207ENST00000470763 OS9Q13438 667 aaPredicted RBP16.17■□□□□ 0.18
NPHP4-207ENST00000470763 GORABQ5T7V8 394 aa16.17■□□□□ 0.18
NPHP4-207ENST00000470763 ERCC4Q92889 916 aaPredicted RBP16.17■□□□□ 0.18
NPHP4-207ENST00000470763 NUDT16Q96DE0 195 aaKnown RBP16.17■□□□□ 0.18
NPHP4-207ENST00000470763 MRFAP1L1Q96HT8 127 aa16.17■□□□□ 0.18
NPHP4-207ENST00000470763 COL16A1Q07092 1604 aaPredicted RBP16.17■□□□□ 0.18
NPHP4-207ENST00000470763 WASLO00401 505 aaPredicted RBP16.16■□□□□ 0.18
NPHP4-207ENST00000470763 POLR3GO15318 223 aaPredicted RBP16.16■□□□□ 0.18
NPHP4-207ENST00000470763 RUFY2Q8WXA3 655 aa16.16■□□□□ 0.18
NPHP4-207ENST00000470763 NEMFO60524 1076 aa16.16■□□□□ 0.18
NPHP4-207ENST00000470763 CREB3L3Q68CJ9 461 aa16.16■□□□□ 0.18
NPHP4-207ENST00000470763 NEK11Q8NG66 645 aa16.16■□□□□ 0.18
NPHP4-207ENST00000470763 TM6SF1Q9BZW5 370 aa16.16■□□□□ 0.18
NPHP4-207ENST00000470763 TAF6LQ9Y6J9 622 aa16.16■□□□□ 0.18
NPHP4-207ENST00000470763 SNW1Q13573 536 aaKnown RBP16.16■□□□□ 0.18
NPHP4-207ENST00000470763 NECTIN1Q15223 517 aa16.16■□□□□ 0.18
NPHP4-207ENST00000470763 SYT10Q6XYQ8 523 aa16.16■□□□□ 0.18
NPHP4-207ENST00000470763 PHAXQ9H814 394 aaKnown RBP16.16■□□□□ 0.18
NPHP4-207ENST00000470763 TTC21BQ7Z4L5 1316 aa16.15■□□□□ 0.18
NPHP4-207ENST00000470763 H2AFXP16104 143 aaPredicted RBP16.15■□□□□ 0.18
NPHP4-207ENST00000470763 SARM1Q6SZW1 724 aa16.15■□□□□ 0.18
NPHP4-207ENST00000470763 MAP3K19Q56UN5 1328 aa16.15■□□□□ 0.18
NPHP4-207ENST00000470763 JAK2O60674 1132 aa16.15■□□□□ 0.18
NPHP4-207ENST00000470763 NBPF7P0C2Y1 421 aaPredicted RBP16.15■□□□□ 0.18
NPHP4-207ENST00000470763 PNMA6AP0CW24 399 aaPredicted RBP16.15■□□□□ 0.18
NPHP4-207ENST00000470763 FAM227BQ96M60 508 aa16.15■□□□□ 0.18
NPHP4-207ENST00000470763 ARHGEF10O15013 1369 aa16.15■□□□□ 0.18
NPHP4-207ENST00000470763 AHDC1Q5TGY3 1603 aaPredicted RBP16.14■□□□□ 0.18
NPHP4-207ENST00000470763 FOSBP53539 338 aa16.14■□□□□ 0.17
NPHP4-207ENST00000470763 ARHGAP29Q52LW3 1261 aa16.14■□□□□ 0.17
NPHP4-207ENST00000470763 TECPR2O15040 1411 aa16.14■□□□□ 0.17
NPHP4-207ENST00000470763 GLRX3O76003 335 aaKnown RBP16.14■□□□□ 0.17
NPHP4-207ENST00000470763 PLA2G4AP47712 749 aa16.14■□□□□ 0.17
NPHP4-207ENST00000470763 RAD51AP2Q09MP3 1159 aa16.14■□□□□ 0.17
NPHP4-207ENST00000470763 POLA2Q14181 598 aa16.14■□□□□ 0.17
NPHP4-207ENST00000470763 FTOQ9C0B1 505 aaKnown RBP eCLIP16.14■□□□□ 0.17
NPHP4-207ENST00000470763 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.13■□□□□ 0.17
NPHP4-207ENST00000470763 HTATSF1O43719 755 aaKnown RBP16.13■□□□□ 0.17
NPHP4-207ENST00000470763 SLC20A2Q08357 652 aa16.13■□□□□ 0.17
NPHP4-207ENST00000470763 STX1AQ16623 288 aa16.13■□□□□ 0.17
NPHP4-207ENST00000470763 AOPEPQ8N6M6 819 aa16.13■□□□□ 0.17
NPHP4-207ENST00000470763 E4F1Q66K89 784 aaPredicted RBP16.12■□□□□ 0.17
NPHP4-207ENST00000470763 BLOC1S2Q6QNY1 142 aa16.12■□□□□ 0.17
NPHP4-207ENST00000470763 DHX40Q8IX18 779 aaKnown RBP16.12■□□□□ 0.17
NPHP4-207ENST00000470763 SLC27A2O14975 620 aa16.12■□□□□ 0.17
NPHP4-207ENST00000470763 RGS17Q9UGC6 210 aaPredicted RBP16.12■□□□□ 0.17
NPHP4-207ENST00000470763 FEZ2Q9UHY8 353 aaPredicted RBP16.12■□□□□ 0.17
NPHP4-207ENST00000470763 DLC1Q96QB1 1528 aa16.12■□□□□ 0.17
NPHP4-207ENST00000470763 NUTM2FA1L443 756 aa16.12■□□□□ 0.17
NPHP4-207ENST00000470763 BRF1Q92994 677 aa16.12■□□□□ 0.17
NPHP4-207ENST00000470763 PPP1R13BQ96KQ4 1090 aa16.12■□□□□ 0.17
NPHP4-207ENST00000470763 CCDC61Q9Y6R9 512 aa16.12■□□□□ 0.17
NPHP4-207ENST00000470763 NRKQ7Z2Y5 1582 aa16.11■□□□□ 0.17
NPHP4-207ENST00000470763 ADCY9O60503 1353 aa16.11■□□□□ 0.17
NPHP4-207ENST00000470763 TOB2Q14106 344 aaPredicted RBP16.11■□□□□ 0.17
NPHP4-207ENST00000470763 RNF20Q5VTR2 975 aa16.11■□□□□ 0.17
NPHP4-207ENST00000470763 CERS3Q8IU89 383 aa16.11■□□□□ 0.17
NPHP4-207ENST00000470763 C1orf167Q5SNV9 1468 aa16.11■□□□□ 0.17
NPHP4-207ENST00000470763 SEC31AO94979 1220 aaKnown RBP16.11■□□□□ 0.17
NPHP4-207ENST00000470763 CAVIN2O95810 425 aa16.11■□□□□ 0.17
NPHP4-207ENST00000470763 IFIT2P09913 472 aaKnown RBP16.11■□□□□ 0.17
NPHP4-207ENST00000470763 KCNB2Q92953 911 aa16.11■□□□□ 0.17
NPHP4-207ENST00000470763 L2HGDHQ9H9P8 463 aa16.11■□□□□ 0.17
NPHP4-207ENST00000470763 MAP3K5Q99683 1374 aa16.11■□□□□ 0.17
NPHP4-207ENST00000470763 JCADQ9P266 1359 aa16.11■□□□□ 0.17
NPHP4-207ENST00000470763 NMIQ13287 307 aaPredicted RBP16.1■□□□□ 0.17
NPHP4-207ENST00000470763 CCAR1Q8IX12 1150 aaKnown RBP16.1■□□□□ 0.17
NPHP4-207ENST00000470763 DDX17Q92841 729 aaKnown RBP16.1■□□□□ 0.17
NPHP4-207ENST00000470763 GOLPH3LQ9H4A5 285 aa16.1■□□□□ 0.17
NPHP4-207ENST00000470763 FAM208AQ9UK61 1670 aaKnown RBP16.1■□□□□ 0.17
NPHP4-207ENST00000470763 H3BQV1 296 aa16.1■□□□□ 0.17
NPHP4-207ENST00000470763 IFFO2Q5TF58 517 aa16.1■□□□□ 0.17
NPHP4-207ENST00000470763 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.1■□□□□ 0.17
NPHP4-207ENST00000470763 PSMA5P28066 241 aa16.1■□□□□ 0.17
NPHP4-207ENST00000470763 ST5P78524 1137 aa16.1■□□□□ 0.17
NPHP4-207ENST00000470763 RESTQ13127 1097 aa16.1■□□□□ 0.17
NPHP4-207ENST00000470763 NBPF11Q86T75 865 aa16.1■□□□□ 0.17
NPHP4-207ENST00000470763 ZCCHC17Q9NP64 241 aaKnown RBP16.1■□□□□ 0.17
NPHP4-207ENST00000470763 NHSL1Q5SYE7 1610 aa16.09■□□□□ 0.17
NPHP4-207ENST00000470763 KIF2AO00139 706 aaPredicted RBP16.09■□□□□ 0.17
NPHP4-207ENST00000470763 HOMER1Q86YM7 354 aa16.09■□□□□ 0.17
NPHP4-207ENST00000470763 CREBRFQ8IUR6 639 aa16.09■□□□□ 0.17
NPHP4-207ENST00000470763 CLASRPQ8N2M8 674 aaKnown RBP16.09■□□□□ 0.17
NPHP4-207ENST00000470763 FAM193AP78312 1265 aa16.09■□□□□ 0.17
NPHP4-207ENST00000470763 MAP4K1Q92918 833 aa16.09■□□□□ 0.17
NPHP4-207ENST00000470763 ECHDC1Q9NTX5 307 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms