RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 PI4KAP1Q8N8J0 262 aa18.51■□□□□ 0.55
COL27A1-203ENST00000468565 ZNF428Q96B54 188 aa18.51■□□□□ 0.55
COL27A1-203ENST00000468565 RRAGCQ9HB90 399 aa18.51■□□□□ 0.55
COL27A1-203ENST00000468565 ZNF277Q9NRM2 450 aaPredicted RBP18.51■□□□□ 0.55
COL27A1-203ENST00000468565 CWC25Q9NXE8 425 aaPredicted RBP18.51■□□□□ 0.55
COL27A1-203ENST00000468565 ATP6V0A2Q9Y487 856 aa18.51■□□□□ 0.55
COL27A1-203ENST00000468565 IRS4O14654 1257 aaPredicted RBP18.5■□□□□ 0.55
COL27A1-203ENST00000468565 IARSP41252 1262 aaKnown RBP18.5■□□□□ 0.55
COL27A1-203ENST00000468565 GRAPQ13588 217 aa18.5■□□□□ 0.55
COL27A1-203ENST00000468565 GRAPLQ8TC17 118 aaPredicted RBP18.5■□□□□ 0.55
COL27A1-203ENST00000468565 SCN4AP35499 1836 aa18.5■□□□□ 0.55
COL27A1-203ENST00000468565 PCCAP05165 728 aaPredicted RBP18.49■□□□□ 0.55
COL27A1-203ENST00000468565 G2E3Q7L622 706 aa18.49■□□□□ 0.55
COL27A1-203ENST00000468565 TMX4Q9H1E5 349 aaPredicted RBP18.49■□□□□ 0.55
COL27A1-203ENST00000468565 NEXNQ0ZGT2 675 aa18.49■□□□□ 0.55
COL27A1-203ENST00000468565 FLIIQ13045 1269 aa18.49■□□□□ 0.55
COL27A1-203ENST00000468565 TMC4Q7Z404 712 aa18.49■□□□□ 0.55
COL27A1-203ENST00000468565 SP8Q8IXZ3 490 aa18.48■□□□□ 0.55
COL27A1-203ENST00000468565 C16orf71Q8IYS4 520 aaPredicted RBP18.48■□□□□ 0.55
COL27A1-203ENST00000468565 RBM46Q8TBY0 533 aaKnown RBP18.48■□□□□ 0.55
COL27A1-203ENST00000468565 VEGFAP15692 232 aaPredicted RBP18.47■□□□□ 0.55
COL27A1-203ENST00000468565 RTL5Q5HYW3 569 aaPredicted RBP18.47■□□□□ 0.55
COL27A1-203ENST00000468565 IGKV5-2P06315 115 aa18.47■□□□□ 0.55
COL27A1-203ENST00000468565 CDHR2Q9BYE9 1310 aa18.46■□□□□ 0.55
COL27A1-203ENST00000468565 FKBP5Q13451 457 aaPredicted RBP18.45■□□□□ 0.54
COL27A1-203ENST00000468565 SLC51AQ86UW1 340 aa18.45■□□□□ 0.54
COL27A1-203ENST00000468565 RTFDC1Q9BY42 306 aaPredicted RBP18.45■□□□□ 0.54
COL27A1-203ENST00000468565 VPS33BQ9H267 617 aa18.45■□□□□ 0.54
COL27A1-203ENST00000468565 COL4A1P02462 1669 aa18.45■□□□□ 0.54
COL27A1-203ENST00000468565 COL4A5P29400 1685 aa18.45■□□□□ 0.54
COL27A1-203ENST00000468565 FZD9O00144 591 aa18.45■□□□□ 0.54
COL27A1-203ENST00000468565 PDE8AO60658 829 aa18.45■□□□□ 0.54
COL27A1-203ENST00000468565 SUPT20HQ8NEM7 779 aa18.45■□□□□ 0.54
COL27A1-203ENST00000468565 JDP2Q8WYK2 163 aa18.45■□□□□ 0.54
COL27A1-203ENST00000468565 NEURL1BA8MQ27 555 aa18.44■□□□□ 0.54
COL27A1-203ENST00000468565 POTECB2RU33 542 aa18.44■□□□□ 0.54
COL27A1-203ENST00000468565 E9PSI1 815 aa18.44■□□□□ 0.54
COL27A1-203ENST00000468565 LTBP1Q14766 1721 aa18.44■□□□□ 0.54
COL27A1-203ENST00000468565 DDNO94850 711 aaPredicted RBP18.43■□□□□ 0.54
COL27A1-203ENST00000468565 HSPA6P17066 643 aa18.43■□□□□ 0.54
COL27A1-203ENST00000468565 FSTL1Q12841 308 aa18.43■□□□□ 0.54
COL27A1-203ENST00000468565 DNAAF4Q8WXU2 420 aa18.43■□□□□ 0.54
COL27A1-203ENST00000468565 CELF1Q92879 486 aaKnown RBP18.43■□□□□ 0.54
COL27A1-203ENST00000468565 DUOX1Q9NRD9 1551 aa18.43■□□□□ 0.54
COL27A1-203ENST00000468565 CWF19L2Q2TBE0 894 aaKnown RBP18.43■□□□□ 0.54
COL27A1-203ENST00000468565 DPP8Q6V1X1 898 aaPredicted RBP18.43■□□□□ 0.54
COL27A1-203ENST00000468565 MPNDQ8N594 471 aa18.43■□□□□ 0.54
COL27A1-203ENST00000468565 L3MBTL3Q96JM7 780 aaPredicted RBP18.43■□□□□ 0.54
COL27A1-203ENST00000468565 ZBED9Q6R2W3 1325 aa18.43■□□□□ 0.54
COL27A1-203ENST00000468565 ZNF541Q9H0D2 1346 aa18.43■□□□□ 0.54
COL27A1-203ENST00000468565 CCDC152Q4G0S7 254 aa18.42■□□□□ 0.54
COL27A1-203ENST00000468565 LARGE2Q8N3Y3 721 aa18.42■□□□□ 0.54
COL27A1-203ENST00000468565 LINS1Q8NG48 757 aa18.41■□□□□ 0.54
COL27A1-203ENST00000468565 JARID2Q92833 1246 aaPredicted RBP18.41■□□□□ 0.54
COL27A1-203ENST00000468565 SPEF2Q9C093 1822 aa18.41■□□□□ 0.54
COL27A1-203ENST00000468565 PPIP5K2O43314 1243 aa18.41■□□□□ 0.54
COL27A1-203ENST00000468565 SLFN5Q08AF3 891 aa18.41■□□□□ 0.54
COL27A1-203ENST00000468565 IQCA1LA6NCM1 817 aa18.4■□□□□ 0.54
COL27A1-203ENST00000468565 H7C1W4 665 aa18.4■□□□□ 0.54
COL27A1-203ENST00000468565 RPS8P62241 208 aaKnown RBP18.4■□□□□ 0.54
COL27A1-203ENST00000468565 GCKRQ14397 625 aa18.4■□□□□ 0.54
COL27A1-203ENST00000468565 SMC1BQ8NDV3 1235 aa18.4■□□□□ 0.54
COL27A1-203ENST00000468565 EIF6P56537 245 aaKnown RBP18.39■□□□□ 0.53
COL27A1-203ENST00000468565 NIM1KQ8IY84 436 aa18.39■□□□□ 0.53
COL27A1-203ENST00000468565 GPC2Q8N158 579 aa18.39■□□□□ 0.53
COL27A1-203ENST00000468565 CTSWP56202 376 aa18.39■□□□□ 0.53
COL27A1-203ENST00000468565 AOC3Q16853 763 aa18.39■□□□□ 0.53
COL27A1-203ENST00000468565 SEC31BQ9NQW1 1179 aa18.39■□□□□ 0.53
COL27A1-203ENST00000468565 KIAA2012Q0VF49 1180 aa18.38■□□□□ 0.53
COL27A1-203ENST00000468565 UBE3BQ7Z3V4 1068 aa18.38■□□□□ 0.53
COL27A1-203ENST00000468565 PLA2G12BQ9BX93 195 aa18.38■□□□□ 0.53
COL27A1-203ENST00000468565 RTL9Q8NET4 1388 aa18.38■□□□□ 0.53
COL27A1-203ENST00000468565 RTN4Q9NQC3 1192 aaKnown RBP18.37■□□□□ 0.53
COL27A1-203ENST00000468565 MYCNP04198 464 aaPredicted RBP18.37■□□□□ 0.53
COL27A1-203ENST00000468565 CASP7P55210 303 aa18.37■□□□□ 0.53
COL27A1-203ENST00000468565 BEND3Q5T5X7 828 aa18.37■□□□□ 0.53
COL27A1-203ENST00000468565 TRMT2AQ8IZ69 625 aaKnown RBP18.37■□□□□ 0.53
COL27A1-203ENST00000468565 TTLL11Q8NHH1 800 aa18.37■□□□□ 0.53
COL27A1-203ENST00000468565 F6X3S4 739 aa18.36■□□□□ 0.53
COL27A1-203ENST00000468565 NSFL1CQ9UNZ2 370 aaKnown RBP18.36■□□□□ 0.53
COL27A1-203ENST00000468565 ADAMTSL1Q8N6G6 1762 aa18.36■□□□□ 0.53
COL27A1-203ENST00000468565 APLP1P51693 650 aa18.35■□□□□ 0.53
COL27A1-203ENST00000468565 CDCA7LQ96GN5 454 aa18.35■□□□□ 0.53
COL27A1-203ENST00000468565 CCDC85AQ96PX6 553 aaPredicted RBP18.35■□□□□ 0.53
COL27A1-203ENST00000468565 CDC5LQ99459 802 aaKnown RBP18.35■□□□□ 0.53
COL27A1-203ENST00000468565 PODXL2Q9NZ53 605 aa18.35■□□□□ 0.53
COL27A1-203ENST00000468565 HACL1Q9UJ83 578 aa18.35■□□□□ 0.53
COL27A1-203ENST00000468565 ZNRF3Q9ULT6 936 aa18.35■□□□□ 0.53
COL27A1-203ENST00000468565 GPSM2P81274 684 aa18.35■□□□□ 0.53
COL27A1-203ENST00000468565 ANKRD18AQ8IVF6 992 aa18.35■□□□□ 0.53
COL27A1-203ENST00000468565 TAF1DQ9H5J8 278 aaPredicted RBP18.35■□□□□ 0.53
COL27A1-203ENST00000468565 MRPL50Q8N5N7 158 aaKnown RBP18.34■□□□□ 0.53
COL27A1-203ENST00000468565 GREM2Q9H772 168 aa18.33■□□□□ 0.53
COL27A1-203ENST00000468565 GJA3Q9Y6H8 435 aa18.33■□□□□ 0.53
COL27A1-203ENST00000468565 CEP350Q5VT06 3117 aa18.33■□□□□ 0.52
COL27A1-203ENST00000468565 EYA3Q99504 573 aa18.33■□□□□ 0.52
COL27A1-203ENST00000468565 POLLQ9UGP5 575 aa18.33■□□□□ 0.52
COL27A1-203ENST00000468565 PTPRCP08575 1304 aa18.32■□□□□ 0.52
COL27A1-203ENST00000468565 ALDH1L1O75891 902 aa18.32■□□□□ 0.52
COL27A1-203ENST00000468565 CT47B1P0C2W7 299 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms