RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 KDM2BQ8NHM5 1336 aa19.42■□□□□ 0.7
ATG4B-215ENST00000468018 SCN4AP35499 1836 aa19.4■□□□□ 0.7
ATG4B-215ENST00000468018 FKBP5Q13451 457 aaPredicted RBP19.4■□□□□ 0.7
ATG4B-215ENST00000468018 CWF19L2Q2TBE0 894 aaKnown RBP19.4■□□□□ 0.7
ATG4B-215ENST00000468018 RTL5Q5HYW3 569 aaPredicted RBP19.4■□□□□ 0.7
ATG4B-215ENST00000468018 DDX46Q7L014 1031 aaKnown RBP19.4■□□□□ 0.7
ATG4B-215ENST00000468018 SP8Q8IXZ3 490 aa19.4■□□□□ 0.7
ATG4B-215ENST00000468018 DNAAF4Q8WXU2 420 aa19.4■□□□□ 0.7
ATG4B-215ENST00000468018 CDCA7LQ96GN5 454 aa19.4■□□□□ 0.7
ATG4B-215ENST00000468018 ZNF277Q9NRM2 450 aaPredicted RBP19.4■□□□□ 0.7
ATG4B-215ENST00000468018 HSP90B1P14625 803 aaKnown RBP19.39■□□□□ 0.69
ATG4B-215ENST00000468018 IARSP41252 1262 aaKnown RBP19.39■□□□□ 0.69
ATG4B-215ENST00000468018 NEXNQ0ZGT2 675 aa19.39■□□□□ 0.69
ATG4B-215ENST00000468018 RTFDC1Q9BY42 306 aaPredicted RBP19.39■□□□□ 0.69
ATG4B-215ENST00000468018 H7C1W4 665 aa19.38■□□□□ 0.69
ATG4B-215ENST00000468018 PDE8AO60658 829 aa19.38■□□□□ 0.69
ATG4B-215ENST00000468018 CASP7P55210 303 aa19.38■□□□□ 0.69
ATG4B-215ENST00000468018 TMC4Q7Z404 712 aa19.38■□□□□ 0.69
ATG4B-215ENST00000468018 CELF1Q92879 486 aaKnown RBP19.38■□□□□ 0.69
ATG4B-215ENST00000468018 POTECB2RU33 542 aa19.37■□□□□ 0.69
ATG4B-215ENST00000468018 LINS1Q8NG48 757 aa19.37■□□□□ 0.69
ATG4B-215ENST00000468018 SPEF2Q9C093 1822 aa19.37■□□□□ 0.69
ATG4B-215ENST00000468018 FZD9O00144 591 aa19.36■□□□□ 0.69
ATG4B-215ENST00000468018 GCKRQ14397 625 aa19.36■□□□□ 0.69
ATG4B-215ENST00000468018 JARID2Q92833 1246 aaPredicted RBP19.36■□□□□ 0.69
ATG4B-215ENST00000468018 PLA2G12BQ9BX93 195 aa19.36■□□□□ 0.69
ATG4B-215ENST00000468018 VPS33BQ9H267 617 aa19.36■□□□□ 0.69
ATG4B-215ENST00000468018 RTL9Q8NET4 1388 aa19.35■□□□□ 0.69
ATG4B-215ENST00000468018 TOMM70O94826 608 aa19.35■□□□□ 0.69
ATG4B-215ENST00000468018 BEND3Q5T5X7 828 aa19.35■□□□□ 0.69
ATG4B-215ENST00000468018 RRAGCQ9HB90 399 aa19.35■□□□□ 0.69
ATG4B-215ENST00000468018 F6X3S4 739 aa19.34■□□□□ 0.69
ATG4B-215ENST00000468018 DPY19L2Q6NUT2 758 aa19.34■□□□□ 0.69
ATG4B-215ENST00000468018 MRPL50Q8N5N7 158 aaKnown RBP19.34■□□□□ 0.69
ATG4B-215ENST00000468018 ZNF541Q9H0D2 1346 aa19.33■□□□□ 0.69
ATG4B-215ENST00000468018 CTSWP56202 376 aa19.33■□□□□ 0.68
ATG4B-215ENST00000468018 CCDC152Q4G0S7 254 aa19.33■□□□□ 0.68
ATG4B-215ENST00000468018 TTLL11Q8NHH1 800 aa19.33■□□□□ 0.68
ATG4B-215ENST00000468018 L3MBTL3Q96JM7 780 aaPredicted RBP19.33■□□□□ 0.68
ATG4B-215ENST00000468018 SEC31BQ9NQW1 1179 aa19.33■□□□□ 0.68
ATG4B-215ENST00000468018 DDNO94850 711 aaPredicted RBP19.32■□□□□ 0.68
ATG4B-215ENST00000468018 CT47B1P0C2W7 299 aaPredicted RBP19.32■□□□□ 0.68
ATG4B-215ENST00000468018 RPS8P62241 208 aaKnown RBP19.32■□□□□ 0.68
ATG4B-215ENST00000468018 UBE3BQ7Z3V4 1068 aa19.32■□□□□ 0.68
ATG4B-215ENST00000468018 MPNDQ8N594 471 aa19.32■□□□□ 0.68
ATG4B-215ENST00000468018 RBM46Q8TBY0 533 aaKnown RBP19.32■□□□□ 0.68
ATG4B-215ENST00000468018 SSH1Q8WYL5 1049 aa19.32■□□□□ 0.68
ATG4B-215ENST00000468018 A0A1B0GUL6 1792 aa19.32■□□□□ 0.68
ATG4B-215ENST00000468018 VEGFAP15692 232 aaPredicted RBP19.31■□□□□ 0.68
ATG4B-215ENST00000468018 ALDH1L2Q3SY69 923 aa19.31■□□□□ 0.68
ATG4B-215ENST00000468018 SUPT20HQ8NEM7 779 aa19.31■□□□□ 0.68
ATG4B-215ENST00000468018 TMX4Q9H1E5 349 aaPredicted RBP19.31■□□□□ 0.68
ATG4B-215ENST00000468018 ADAMTSL1Q8N6G6 1762 aa19.31■□□□□ 0.68
ATG4B-215ENST00000468018 KIAA2012Q0VF49 1180 aa19.3■□□□□ 0.68
ATG4B-215ENST00000468018 DPP8Q6V1X1 898 aaPredicted RBP19.3■□□□□ 0.68
ATG4B-215ENST00000468018 PSME4Q14997 1843 aa19.3■□□□□ 0.68
ATG4B-215ENST00000468018 PTPRCP08575 1304 aa19.29■□□□□ 0.68
ATG4B-215ENST00000468018 ALDH1L1O75891 902 aa19.29■□□□□ 0.68
ATG4B-215ENST00000468018 CSF1RP07333 972 aa19.29■□□□□ 0.68
ATG4B-215ENST00000468018 BRPF1P55201 1214 aaPredicted RBP19.29■□□□□ 0.68
ATG4B-215ENST00000468018 LARGE2Q8N3Y3 721 aa19.29■□□□□ 0.68
ATG4B-215ENST00000468018 JDP2Q8WYK2 163 aa19.29■□□□□ 0.68
ATG4B-215ENST00000468018 GREM2Q9H772 168 aa19.29■□□□□ 0.68
ATG4B-215ENST00000468018 PODXL2Q9NZ53 605 aa19.29■□□□□ 0.68
ATG4B-215ENST00000468018 PPIP5K2O43314 1243 aa19.28■□□□□ 0.68
ATG4B-215ENST00000468018 AOC3Q16853 763 aa19.28■□□□□ 0.68
ATG4B-215ENST00000468018 SCN9AQ15858 1988 aa19.28■□□□□ 0.68
ATG4B-215ENST00000468018 GPSM2P81274 684 aa19.27■□□□□ 0.68
ATG4B-215ENST00000468018 GPC2Q8N158 579 aa19.27■□□□□ 0.68
ATG4B-215ENST00000468018 CCDC85AQ96PX6 553 aaPredicted RBP19.27■□□□□ 0.68
ATG4B-215ENST00000468018 POLLQ9UGP5 575 aa19.27■□□□□ 0.68
ATG4B-215ENST00000468018 FSTL1Q12841 308 aa19.26■□□□□ 0.67
ATG4B-215ENST00000468018 NIM1KQ8IY84 436 aa19.26■□□□□ 0.67
ATG4B-215ENST00000468018 NSFL1CQ9UNZ2 370 aaKnown RBP19.26■□□□□ 0.67
ATG4B-215ENST00000468018 UTYO14607 1347 aa19.25■□□□□ 0.67
ATG4B-215ENST00000468018 GRM8O00222 908 aa19.25■□□□□ 0.67
ATG4B-215ENST00000468018 HSPA6P17066 643 aa19.25■□□□□ 0.67
ATG4B-215ENST00000468018 FOXO4P98177 505 aa19.25■□□□□ 0.67
ATG4B-215ENST00000468018 ANKRD18AQ8IVF6 992 aa19.25■□□□□ 0.67
ATG4B-215ENST00000468018 CDC5LQ99459 802 aaKnown RBP19.25■□□□□ 0.67
ATG4B-215ENST00000468018 SRCIN1Q9C0H9 1055 aa19.25■□□□□ 0.67
ATG4B-215ENST00000468018 ZNF646O15015 1829 aaPredicted RBP19.25■□□□□ 0.67
ATG4B-215ENST00000468018 EIF6P56537 245 aaKnown RBP19.24■□□□□ 0.67
ATG4B-215ENST00000468018 C16orf71Q8IYS4 520 aaPredicted RBP19.24■□□□□ 0.67
ATG4B-215ENST00000468018 TBC1D16Q8TBP0 767 aa19.24■□□□□ 0.67
ATG4B-215ENST00000468018 BCL2L13Q9BXK5 485 aa19.24■□□□□ 0.67
ATG4B-215ENST00000468018 BSDC1Q9NW68 430 aaPredicted RBP19.24■□□□□ 0.67
ATG4B-215ENST00000468018 ZNRF3Q9ULT6 936 aa19.24■□□□□ 0.67
ATG4B-215ENST00000468018 IQCA1LA6NCM1 817 aa19.23■□□□□ 0.67
ATG4B-215ENST00000468018 FAM161AQ3B820 660 aa19.23■□□□□ 0.67
ATG4B-215ENST00000468018 YDJCA8MPS7 323 aa19.22■□□□□ 0.67
ATG4B-215ENST00000468018 ITGA6P23229 1130 aa19.22■□□□□ 0.67
ATG4B-215ENST00000468018 SCNN1DP51172 638 aa19.22■□□□□ 0.67
ATG4B-215ENST00000468018 RARSP54136 660 aaKnown RBP19.22■□□□□ 0.67
ATG4B-215ENST00000468018 CXCL9Q07325 125 aa19.22■□□□□ 0.67
ATG4B-215ENST00000468018 WASHC4Q2M389 1173 aa19.22■□□□□ 0.67
ATG4B-215ENST00000468018 EPHA10Q5JZY3 1008 aa19.22■□□□□ 0.67
ATG4B-215ENST00000468018 SLC4A10Q6U841 1118 aa19.22■□□□□ 0.67
ATG4B-215ENST00000468018 SMC1BQ8NDV3 1235 aa19.22■□□□□ 0.67
ATG4B-215ENST00000468018 KAZALD1Q96I82 304 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms