RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 TMEM94Q12767 1356 aa16.08■□□□□ 0.17
BRAT1-203ENST00000467558 NBPF7P0C2Y1 421 aaPredicted RBP16.08■□□□□ 0.17
BRAT1-203ENST00000467558 CRACR2BQ8N4Y2 399 aaPredicted RBP16.08■□□□□ 0.17
BRAT1-203ENST00000467558 SMARCE1Q969G3 411 aa16.08■□□□□ 0.17
BRAT1-203ENST00000467558 USP26Q9BXU7 913 aa16.08■□□□□ 0.17
BRAT1-203ENST00000467558 IGSF1Q8N6C5 1336 aa16.08■□□□□ 0.16
BRAT1-203ENST00000467558 TPTE2Q6XPS3 522 aa16.08■□□□□ 0.16
BRAT1-203ENST00000467558 NYXQ9GZU5 481 aa16.08■□□□□ 0.16
BRAT1-203ENST00000467558 TRPM1Q7Z4N2 1603 aa16.08■□□□□ 0.16
BRAT1-203ENST00000467558 GIGYF1O75420 1035 aaPredicted RBP16.08■□□□□ 0.16
BRAT1-203ENST00000467558 MNS1Q8NEH6 495 aa16.08■□□□□ 0.16
BRAT1-203ENST00000467558 SEC63Q9UGP8 760 aaKnown RBP16.08■□□□□ 0.16
BRAT1-203ENST00000467558 CCP110O43303 1012 aa16.08■□□□□ 0.16
BRAT1-203ENST00000467558 ST5P78524 1137 aa16.08■□□□□ 0.16
BRAT1-203ENST00000467558 PDE4BQ07343 736 aa16.08■□□□□ 0.16
BRAT1-203ENST00000467558 A2ML1A8K2U0 1454 aa16.07■□□□□ 0.16
BRAT1-203ENST00000467558 CAMK4Q16566 473 aa16.07■□□□□ 0.16
BRAT1-203ENST00000467558 KLHL40Q2TBA0 621 aa16.07■□□□□ 0.16
BRAT1-203ENST00000467558 OTUD7AQ8TE49 926 aaPredicted RBP16.07■□□□□ 0.16
BRAT1-203ENST00000467558 R3HCC1Q9Y3T6 440 aaKnown RBP16.07■□□□□ 0.16
BRAT1-203ENST00000467558 RTL1A6NKG5 1358 aa16.07■□□□□ 0.16
BRAT1-203ENST00000467558 AOX1Q06278 1338 aa16.07■□□□□ 0.16
BRAT1-203ENST00000467558 SMTNL1A8MU46 457 aa16.07■□□□□ 0.16
BRAT1-203ENST00000467558 BRPF1P55201 1214 aaPredicted RBP16.07■□□□□ 0.16
BRAT1-203ENST00000467558 ARHGEF25Q86VW2 580 aa16.07■□□□□ 0.16
BRAT1-203ENST00000467558 MICU3Q86XE3 530 aa16.07■□□□□ 0.16
BRAT1-203ENST00000467558 GDPD2Q9HCC8 539 aa16.07■□□□□ 0.16
BRAT1-203ENST00000467558 PNMA6EA0A0J9YXQ4 647 aa16.07■□□□□ 0.16
BRAT1-203ENST00000467558 EYA2O00167 538 aa16.07■□□□□ 0.16
BRAT1-203ENST00000467558 METAP2P50579 478 aaKnown RBP eCLIP16.07■□□□□ 0.16
BRAT1-203ENST00000467558 TFIP11Q9UBB9 837 aaKnown RBP16.07■□□□□ 0.16
BRAT1-203ENST00000467558 ERVV-2B6SEH9 535 aa16.06■□□□□ 0.16
BRAT1-203ENST00000467558 CBFA2T2O43439 604 aa16.06■□□□□ 0.16
BRAT1-203ENST00000467558 A1BGP04217 495 aa16.06■□□□□ 0.16
BRAT1-203ENST00000467558 GPS2Q13227 327 aa16.06■□□□□ 0.16
BRAT1-203ENST00000467558 GCKRQ14397 625 aa16.06■□□□□ 0.16
BRAT1-203ENST00000467558 TCEANC2Q96MN5 208 aa16.06■□□□□ 0.16
BRAT1-203ENST00000467558 BMP2KQ9NSY1 1161 aaPredicted RBP16.06■□□□□ 0.16
BRAT1-203ENST00000467558 DDX19AQ9NUU7 478 aaKnown RBP16.06■□□□□ 0.16
BRAT1-203ENST00000467558 RTCBQ9Y3I0 505 aaKnown RBP16.06■□□□□ 0.16
BRAT1-203ENST00000467558 CTAGE5O15320 804 aa16.06■□□□□ 0.16
BRAT1-203ENST00000467558 RBM25P49756 843 aaKnown RBP16.06■□□□□ 0.16
BRAT1-203ENST00000467558 FAM89AQ96GI7 184 aa16.06■□□□□ 0.16
BRAT1-203ENST00000467558 CRNKL1Q9BZJ0 848 aaKnown RBP16.06■□□□□ 0.16
BRAT1-203ENST00000467558 ZSCAN16Q9H4T2 348 aaPredicted RBP16.06■□□□□ 0.16
BRAT1-203ENST00000467558 RNF113AO15541 343 aaKnown RBP16.06■□□□□ 0.16
BRAT1-203ENST00000467558 ZSCAN22P10073 491 aaPredicted RBP16.06■□□□□ 0.16
BRAT1-203ENST00000467558 CYP7A1P22680 504 aa16.06■□□□□ 0.16
BRAT1-203ENST00000467558 NECAB1Q8N987 351 aa16.06■□□□□ 0.16
BRAT1-203ENST00000467558 MPHOSPH10O00566 681 aaKnown RBP16.05■□□□□ 0.16
BRAT1-203ENST00000467558 PHKG2P15735 406 aa16.05■□□□□ 0.16
BRAT1-203ENST00000467558 KRT23Q9C075 422 aa16.05■□□□□ 0.16
BRAT1-203ENST00000467558 CNNM2Q9H8M5 875 aa16.05■□□□□ 0.16
BRAT1-203ENST00000467558 ANO10Q9NW15 660 aa16.05■□□□□ 0.16
BRAT1-203ENST00000467558 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.05■□□□□ 0.16
BRAT1-203ENST00000467558 KLF18A0A0U1RQI7 1052 aa16.05■□□□□ 0.16
BRAT1-203ENST00000467558 TSPY2A6NKD2 308 aa16.05■□□□□ 0.16
BRAT1-203ENST00000467558 TMTC2Q8N394 836 aa16.05■□□□□ 0.16
BRAT1-203ENST00000467558 ZGPATQ8N5A5 531 aaKnown RBP16.05■□□□□ 0.16
BRAT1-203ENST00000467558 UBE2HP62256 183 aa16.05■□□□□ 0.16
BRAT1-203ENST00000467558 SPHKAPQ2M3C7 1700 aa16.05■□□□□ 0.16
BRAT1-203ENST00000467558 ESPNB1AK53 854 aa16.04■□□□□ 0.16
BRAT1-203ENST00000467558 KIF5BP33176 963 aa16.04■□□□□ 0.16
BRAT1-203ENST00000467558 NAP1L1P55209 391 aaKnown RBP16.04■□□□□ 0.16
BRAT1-203ENST00000467558 PARP10Q53GL7 1025 aa16.04■□□□□ 0.16
BRAT1-203ENST00000467558 BCL11BQ9C0K0 894 aaPredicted RBP16.04■□□□□ 0.16
BRAT1-203ENST00000467558 SH3TC1Q8TE82 1336 aa16.04■□□□□ 0.16
BRAT1-203ENST00000467558 USP44Q9H0E7 712 aa16.04■□□□□ 0.16
BRAT1-203ENST00000467558 IQSEC3Q9UPP2 1182 aaPredicted RBP16.04■□□□□ 0.16
BRAT1-203ENST00000467558 GSTO1P78417 241 aa16.04■□□□□ 0.16
BRAT1-203ENST00000467558 CREB3L3Q68CJ9 461 aa16.04■□□□□ 0.16
BRAT1-203ENST00000467558 PPFIBP1Q86W92 1011 aa16.04■□□□□ 0.16
BRAT1-203ENST00000467558 PDE4CQ08493 712 aa16.03■□□□□ 0.16
BRAT1-203ENST00000467558 SUCLG2Q96I99 432 aa16.03■□□□□ 0.16
BRAT1-203ENST00000467558 TNNI3KQ59H18 835 aa16.03■□□□□ 0.16
BRAT1-203ENST00000467558 NAA16Q6N069 864 aaPredicted RBP16.03■□□□□ 0.16
BRAT1-203ENST00000467558 MPNDQ8N594 471 aa16.03■□□□□ 0.16
BRAT1-203ENST00000467558 HELBQ8NG08 1087 aaPredicted RBP16.03■□□□□ 0.16
BRAT1-203ENST00000467558 ESR2Q92731 530 aa16.03■□□□□ 0.16
BRAT1-203ENST00000467558 INTS4Q96HW7 963 aaKnown RBP16.03■□□□□ 0.16
BRAT1-203ENST00000467558 LRRC2Q9BYS8 371 aa16.03■□□□□ 0.16
BRAT1-203ENST00000467558 SLC4A4Q9Y6R1 1079 aa16.03■□□□□ 0.16
BRAT1-203ENST00000467558 FPGT-TNNI3KV9GXZ4 949 aa16.03■□□□□ 0.16
BRAT1-203ENST00000467558 TIMM10P62072 90 aa16.03■□□□□ 0.16
BRAT1-203ENST00000467558 WTAPQ15007 396 aa16.03■□□□□ 0.16
BRAT1-203ENST00000467558 Q6ZUG5 572 aa16.03■□□□□ 0.16
BRAT1-203ENST00000467558 DNAJC10Q8IXB1 793 aa16.03■□□□□ 0.16
BRAT1-203ENST00000467558 CCDC171Q6TFL3 1326 aa16.03■□□□□ 0.16
BRAT1-203ENST00000467558 ZBTB43O43298 467 aa16.02■□□□□ 0.16
BRAT1-203ENST00000467558 KCNQ3O43525 872 aa16.02■□□□□ 0.16
BRAT1-203ENST00000467558 ZNHIT6Q9NWK9 470 aaKnown RBP16.02■□□□□ 0.16
BRAT1-203ENST00000467558 CDK12Q9NYV4 1490 aaPredicted RBP16.02■□□□□ 0.16
BRAT1-203ENST00000467558 A0A1B0GUL7 405 aa16.02■□□□□ 0.15
BRAT1-203ENST00000467558 PRIM1P49642 420 aaKnown RBP16.02■□□□□ 0.15
BRAT1-203ENST00000467558 FILIP1Q7Z7B0 1213 aa16.02■□□□□ 0.15
BRAT1-203ENST00000467558 FSIP1Q8NA03 581 aa16.02■□□□□ 0.15
BRAT1-203ENST00000467558 ARGLU1Q9NWB6 273 aaPredicted RBP16.02■□□□□ 0.15
BRAT1-203ENST00000467558 NLRP5P59047 1200 aa16.01■□□□□ 0.15
BRAT1-203ENST00000467558 ZHX3Q9H4I2 956 aa16.01■□□□□ 0.15
BRAT1-203ENST00000467558 CCDC194A0A1B0GVG4 234 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms