RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 STYK1Q6J9G0 422 aa20.1■□□□□ 0.81
GPC1-207ENST00000466624 SUCLG2Q96I99 432 aa20.1■□□□□ 0.81
GPC1-207ENST00000466624 COG6Q9Y2V7 657 aa20.1■□□□□ 0.81
GPC1-207ENST00000466624 CSF1RP07333 972 aa20.09■□□□□ 0.81
GPC1-207ENST00000466624 KCNA3P22001 575 aa20.09■□□□□ 0.81
GPC1-207ENST00000466624 CHRNA5P30532 468 aa20.09■□□□□ 0.81
GPC1-207ENST00000466624 FOXO4P98177 505 aa20.09■□□□□ 0.81
GPC1-207ENST00000466624 CCDC152Q4G0S7 254 aa20.09■□□□□ 0.81
GPC1-207ENST00000466624 NLGN2Q8NFZ4 835 aa20.09■□□□□ 0.81
GPC1-207ENST00000466624 TTLL11Q8NHH1 800 aa20.09■□□□□ 0.81
GPC1-207ENST00000466624 RPGRQ92834 1020 aaKnown RBP20.09■□□□□ 0.81
GPC1-207ENST00000466624 KAZALD1Q96I82 304 aa20.09■□□□□ 0.81
GPC1-207ENST00000466624 ARFGEF1Q9Y6D6 1849 aa20.09■□□□□ 0.81
GPC1-207ENST00000466624 A0A0G2JLW4 131 aa20.08■□□□□ 0.81
GPC1-207ENST00000466624 RABL6Q3YEC7 729 aaPredicted RBP20.08■□□□□ 0.81
GPC1-207ENST00000466624 RBM17Q96I25 401 aaKnown RBP20.08■□□□□ 0.81
GPC1-207ENST00000466624 ALDH1B1P30837 517 aa20.07■□□□□ 0.8
GPC1-207ENST00000466624 CNKSR1Q969H4 720 aa20.07■□□□□ 0.8
GPC1-207ENST00000466624 CRAMP1Q96RY5 1269 aa20.07■□□□□ 0.8
GPC1-207ENST00000466624 TAF1P21675 1872 aa20.07■□□□□ 0.8
GPC1-207ENST00000466624 GNAI2P04899 355 aa20.06■□□□□ 0.8
GPC1-207ENST00000466624 EPHA10Q5JZY3 1008 aa20.06■□□□□ 0.8
GPC1-207ENST00000466624 BICC1Q9H694 974 aaKnown RBP20.06■□□□□ 0.8
GPC1-207ENST00000466624 PIM2Q9P1W9 311 aa20.06■□□□□ 0.8
GPC1-207ENST00000466624 SLX4Q8IY92 1834 aa20.05■□□□□ 0.8
GPC1-207ENST00000466624 LMBR1LQ6UX01 489 aa20.05■□□□□ 0.8
GPC1-207ENST00000466624 DDX46Q7L014 1031 aaKnown RBP20.05■□□□□ 0.8
GPC1-207ENST00000466624 ANKRD44Q8N8A2 993 aa20.05■□□□□ 0.8
GPC1-207ENST00000466624 LRRFIP2Q9Y608 721 aaKnown RBP20.05■□□□□ 0.8
GPC1-207ENST00000466624 SRCAPQ6ZRS2 3230 aa20.05■□□□□ 0.8
GPC1-207ENST00000466624 TTLL6Q8N841 843 aa20.04■□□□□ 0.8
GPC1-207ENST00000466624 ZNF622Q969S3 477 aaKnown RBP eCLIP20.04■□□□□ 0.8
GPC1-207ENST00000466624 ZBTB40Q9NUA8 1239 aa20.04■□□□□ 0.8
GPC1-207ENST00000466624 LRRC37AA6NMS7 1700 aa20.03■□□□□ 0.8
GPC1-207ENST00000466624 MTX1Q13505 466 aa20.03■□□□□ 0.8
GPC1-207ENST00000466624 GRAPQ13588 217 aa20.03■□□□□ 0.8
GPC1-207ENST00000466624 GRAPLQ8TC17 118 aaPredicted RBP20.03■□□□□ 0.8
GPC1-207ENST00000466624 GREM2Q9H772 168 aa20.03■□□□□ 0.8
GPC1-207ENST00000466624 SPEF2Q9C093 1822 aa20.03■□□□□ 0.8
GPC1-207ENST00000466624 FAM161AQ3B820 660 aa20.02■□□□□ 0.8
GPC1-207ENST00000466624 TMC4Q7Z404 712 aa20.02■□□□□ 0.8
GPC1-207ENST00000466624 CDC5LQ99459 802 aaKnown RBP20.02■□□□□ 0.8
GPC1-207ENST00000466624 COL4A1P02462 1669 aa20.01■□□□□ 0.79
GPC1-207ENST00000466624 BBOX1O75936 387 aa20.01■□□□□ 0.79
GPC1-207ENST00000466624 ITGA6P23229 1130 aa20.01■□□□□ 0.79
GPC1-207ENST00000466624 IFIT5Q13325 482 aaKnown RBP20.01■□□□□ 0.79
GPC1-207ENST00000466624 AAMPQ13685 434 aa20.01■□□□□ 0.79
GPC1-207ENST00000466624 DALRD3Q5D0E6 543 aaKnown RBP20.01■□□□□ 0.79
GPC1-207ENST00000466624 ANKRD18BA2A2Z9 1011 aa20■□□□□ 0.79
GPC1-207ENST00000466624 CCDC57Q2TAC2 916 aa20■□□□□ 0.79
GPC1-207ENST00000466624 PRPF40BQ6NWY9 871 aaKnown RBP20■□□□□ 0.79
GPC1-207ENST00000466624 CCDC85AQ96PX6 553 aaPredicted RBP20■□□□□ 0.79
GPC1-207ENST00000466624 CRBNQ96SW2 442 aa20■□□□□ 0.79
GPC1-207ENST00000466624 SEC31BQ9NQW1 1179 aa20■□□□□ 0.79
GPC1-207ENST00000466624 RPS8P62241 208 aaKnown RBP19.99■□□□□ 0.79
GPC1-207ENST00000466624 CELF1Q92879 486 aaKnown RBP19.99■□□□□ 0.79
GPC1-207ENST00000466624 CHMP3Q9Y3E7 222 aa19.99■□□□□ 0.79
GPC1-207ENST00000466624 PPEF1O14829 653 aaPredicted RBP19.98■□□□□ 0.79
GPC1-207ENST00000466624 ANKRD18AQ8IVF6 992 aa19.98■□□□□ 0.79
GPC1-207ENST00000466624 C7orf43Q8WVR3 580 aa19.98■□□□□ 0.79
GPC1-207ENST00000466624 FER1L6Q2WGJ9 1857 aa19.97■□□□□ 0.79
GPC1-207ENST00000466624 IGHMBP2P38935 993 aaKnown RBP19.97■□□□□ 0.79
GPC1-207ENST00000466624 SOGA3Q5TF21 947 aa19.97■□□□□ 0.79
GPC1-207ENST00000466624 CC2D2BQ6DHV5 1058 aa19.97■□□□□ 0.79
GPC1-207ENST00000466624 C1orf115Q9H7X2 142 aa19.97■□□□□ 0.79
GPC1-207ENST00000466624 BCS1LQ9Y276 419 aa19.97■□□□□ 0.79
GPC1-207ENST00000466624 A0A1B0GUL6 1792 aa19.97■□□□□ 0.79
GPC1-207ENST00000466624 RFX5P48382 616 aaPredicted RBP19.96■□□□□ 0.79
GPC1-207ENST00000466624 ATP8B2P98198 1209 aa19.96■□□□□ 0.79
GPC1-207ENST00000466624 GRIPAP1Q4V328 841 aa19.96■□□□□ 0.79
GPC1-207ENST00000466624 CEP85Q6P2H3 762 aa19.96■□□□□ 0.79
GPC1-207ENST00000466624 RPAP2Q8IXW5 612 aaPredicted RBP19.96■□□□□ 0.79
GPC1-207ENST00000466624 BSDC1Q9NW68 430 aaPredicted RBP19.96■□□□□ 0.79
GPC1-207ENST00000466624 ATP6V0A2Q9Y487 856 aa19.96■□□□□ 0.79
GPC1-207ENST00000466624 SRGAP3O43295 1099 aa19.95■□□□□ 0.78
GPC1-207ENST00000466624 SP8Q8IXZ3 490 aa19.95■□□□□ 0.78
GPC1-207ENST00000466624 LTBP1Q14766 1721 aa19.95■□□□□ 0.78
GPC1-207ENST00000466624 SNED1Q8TER0 1413 aa19.94■□□□□ 0.78
GPC1-207ENST00000466624 POLA2Q14181 598 aa19.94■□□□□ 0.78
GPC1-207ENST00000466624 TAF7LQ5H9L4 462 aa19.94■□□□□ 0.78
GPC1-207ENST00000466624 SSH3Q8TE77 659 aa19.94■□□□□ 0.78
GPC1-207ENST00000466624 MPHOSPH8Q99549 860 aa19.94■□□□□ 0.78
GPC1-207ENST00000466624 FBXO3Q9UK99 471 aa19.94■□□□□ 0.78
GPC1-207ENST00000466624 PNMA6EA0A0J9YXQ4 647 aa19.93■□□□□ 0.78
GPC1-207ENST00000466624 PTPN12Q05209 780 aaKnown RBP19.93■□□□□ 0.78
GPC1-207ENST00000466624 TMX4Q9H1E5 349 aaPredicted RBP19.93■□□□□ 0.78
GPC1-207ENST00000466624 COPRSQ9NQ92 184 aa19.93■□□□□ 0.78
GPC1-207ENST00000466624 C21orf2O43822 256 aa19.92■□□□□ 0.78
GPC1-207ENST00000466624 YBX3P16989 372 aaKnown RBP eCLIP19.92■□□□□ 0.78
GPC1-207ENST00000466624 CCDC93Q567U6 631 aa19.92■□□□□ 0.78
GPC1-207ENST00000466624 EXOC6Q8TAG9 804 aa19.92■□□□□ 0.78
GPC1-207ENST00000466624 WWC3Q9ULE0 1092 aa19.92■□□□□ 0.78
GPC1-207ENST00000466624 LDHAL6AQ6ZMR3 332 aa19.91■□□□□ 0.78
GPC1-207ENST00000466624 RTKN2Q8IZC4 609 aa19.91■□□□□ 0.78
GPC1-207ENST00000466624 ZNF594Q96JF6 807 aaPredicted RBP19.91■□□□□ 0.78
GPC1-207ENST00000466624 GRIN3BO60391 1043 aa19.9■□□□□ 0.78
GPC1-207ENST00000466624 HMMRO75330 724 aa19.9■□□□□ 0.78
GPC1-207ENST00000466624 CIAO1O76071 339 aa19.9■□□□□ 0.78
GPC1-207ENST00000466624 GPR162Q16538 588 aa19.9■□□□□ 0.78
GPC1-207ENST00000466624 PODXL2Q9NZ53 605 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms