RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 PPIP5K2O43314 1243 aa17.13■□□□□ 0.33
COMMD3-205ENST00000463688 RPS8P62241 208 aaKnown RBP17.13■□□□□ 0.33
COMMD3-205ENST00000463688 FLIIQ13045 1269 aa17.13■□□□□ 0.33
COMMD3-205ENST00000463688 FKBP5Q13451 457 aaPredicted RBP17.13■□□□□ 0.33
COMMD3-205ENST00000463688 SLX4Q8IY92 1834 aa17.13■□□□□ 0.33
COMMD3-205ENST00000463688 VAMP4O75379 141 aa17.13■□□□□ 0.33
COMMD3-205ENST00000463688 PRELPP51888 382 aa17.13■□□□□ 0.33
COMMD3-205ENST00000463688 CDC5LQ99459 802 aaKnown RBP17.13■□□□□ 0.33
COMMD3-205ENST00000463688 HACL1Q9UJ83 578 aa17.13■□□□□ 0.33
COMMD3-205ENST00000463688 CDHR2Q9BYE9 1310 aa17.12■□□□□ 0.33
COMMD3-205ENST00000463688 TNIP1Q15025 636 aa17.12■□□□□ 0.33
COMMD3-205ENST00000463688 ZNRF3Q9ULT6 936 aa17.12■□□□□ 0.33
COMMD3-205ENST00000463688 COL11A2P13942 1736 aaPredicted RBP17.12■□□□□ 0.33
COMMD3-205ENST00000463688 ARFGEF2Q9Y6D5 1785 aa17.12■□□□□ 0.33
COMMD3-205ENST00000463688 TCERG1O14776 1098 aaKnown RBP17.11■□□□□ 0.33
COMMD3-205ENST00000463688 DDNO94850 711 aaPredicted RBP17.11■□□□□ 0.33
COMMD3-205ENST00000463688 EXOSC9Q06265 439 aaKnown RBP17.11■□□□□ 0.33
COMMD3-205ENST00000463688 LDHDQ86WU2 507 aa17.11■□□□□ 0.33
COMMD3-205ENST00000463688 LINS1Q8NG48 757 aa17.11■□□□□ 0.33
COMMD3-205ENST00000463688 DNAAF4Q8WXU2 420 aa17.11■□□□□ 0.33
COMMD3-205ENST00000463688 SBF1O95248 1867 aa17.1■□□□□ 0.33
COMMD3-205ENST00000463688 FER1L6Q2WGJ9 1857 aa17.1■□□□□ 0.33
COMMD3-205ENST00000463688 TNRC6CQ9HCJ0 1690 aaKnown RBP17.1■□□□□ 0.33
COMMD3-205ENST00000463688 CHADLQ6NUI6 762 aa17.1■□□□□ 0.33
COMMD3-205ENST00000463688 C3orf67Q6ZVT6 689 aa17.1■□□□□ 0.33
COMMD3-205ENST00000463688 KIAA2012Q0VF49 1180 aa17.09■□□□□ 0.33
COMMD3-205ENST00000463688 ANKRD18AQ8IVF6 992 aa17.09■□□□□ 0.33
COMMD3-205ENST00000463688 NSFL1CQ9UNZ2 370 aaKnown RBP17.09■□□□□ 0.33
COMMD3-205ENST00000463688 NEURL1BA8MQ27 555 aa17.08■□□□□ 0.32
COMMD3-205ENST00000463688 G3V3G9 751 aa17.08■□□□□ 0.32
COMMD3-205ENST00000463688 CT47B1P0C2W7 299 aaPredicted RBP17.08■□□□□ 0.32
COMMD3-205ENST00000463688 WASHC4Q2M389 1173 aa17.08■□□□□ 0.32
COMMD3-205ENST00000463688 RTL5Q5HYW3 569 aaPredicted RBP17.08■□□□□ 0.32
COMMD3-205ENST00000463688 DCAF8Q5TAQ9 597 aa17.08■□□□□ 0.32
COMMD3-205ENST00000463688 EPHX2P34913 555 aa17.07■□□□□ 0.32
COMMD3-205ENST00000463688 OLFM4Q6UX06 510 aa17.07■□□□□ 0.32
COMMD3-205ENST00000463688 ZC3H12CQ9C0D7 883 aaKnown RBP17.07■□□□□ 0.32
COMMD3-205ENST00000463688 TAF1DQ9H5J8 278 aaPredicted RBP17.07■□□□□ 0.32
COMMD3-205ENST00000463688 C6orf229H3BNL8 230 aa17.06■□□□□ 0.32
COMMD3-205ENST00000463688 CTSWP56202 376 aa17.06■□□□□ 0.32
COMMD3-205ENST00000463688 PLA2G12BQ9BX93 195 aa17.06■□□□□ 0.32
COMMD3-205ENST00000463688 PODXL2Q9NZ53 605 aa17.06■□□□□ 0.32
COMMD3-205ENST00000463688 ANKIB1Q9P2G1 1089 aa17.06■□□□□ 0.32
COMMD3-205ENST00000463688 GJA3Q9Y6H8 435 aa17.06■□□□□ 0.32
COMMD3-205ENST00000463688 ANKRD36CQ5JPF3 1778 aa17.06■□□□□ 0.32
COMMD3-205ENST00000463688 H7C1W4 665 aa17.05■□□□□ 0.32
COMMD3-205ENST00000463688 IGHMBP2P38935 993 aaKnown RBP17.05■□□□□ 0.32
COMMD3-205ENST00000463688 GCKRQ14397 625 aa17.05■□□□□ 0.32
COMMD3-205ENST00000463688 USP50Q70EL3 339 aaPredicted RBP17.05■□□□□ 0.32
COMMD3-205ENST00000463688 SNED1Q8TER0 1413 aa17.05■□□□□ 0.32
COMMD3-205ENST00000463688 RTL9Q8NET4 1388 aa17.05■□□□□ 0.32
COMMD3-205ENST00000463688 WDR90Q96KV7 1748 aa17.05■□□□□ 0.32
COMMD3-205ENST00000463688 ZNF521Q96K83 1311 aa17.05■□□□□ 0.32
COMMD3-205ENST00000463688 IGKV5-2P06315 115 aa17.04■□□□□ 0.32
COMMD3-205ENST00000463688 AOC3Q16853 763 aa17.04■□□□□ 0.32
COMMD3-205ENST00000463688 CIAPIN1Q6FI81 312 aa17.04■□□□□ 0.32
COMMD3-205ENST00000463688 GGA1Q9UJY5 639 aa17.04■□□□□ 0.32
COMMD3-205ENST00000463688 HDAC5Q9UQL6 1122 aa17.04■□□□□ 0.32
COMMD3-205ENST00000463688 CLEC11AQ9Y240 323 aa17.04■□□□□ 0.32
COMMD3-205ENST00000463688 PTPRCP08575 1304 aa17.04■□□□□ 0.32
COMMD3-205ENST00000463688 POTECB2RU33 542 aa17.04■□□□□ 0.32
COMMD3-205ENST00000463688 ALDH1L1O75891 902 aa17.04■□□□□ 0.32
COMMD3-205ENST00000463688 ATP2B4P23634 1241 aa17.04■□□□□ 0.32
COMMD3-205ENST00000463688 CELF1Q92879 486 aaKnown RBP17.04■□□□□ 0.32
COMMD3-205ENST00000463688 BCL2L13Q9BXK5 485 aa17.04■□□□□ 0.32
COMMD3-205ENST00000463688 ANKRD2Q9GZV1 360 aa17.04■□□□□ 0.32
COMMD3-205ENST00000463688 BSDC1Q9NW68 430 aaPredicted RBP17.04■□□□□ 0.32
COMMD3-205ENST00000463688 DICER1Q9UPY3 1922 aaKnown RBP17.03■□□□□ 0.32
COMMD3-205ENST00000463688 XDHP47989 1333 aa17.03■□□□□ 0.32
COMMD3-205ENST00000463688 ZNF541Q9H0D2 1346 aa17.03■□□□□ 0.32
COMMD3-205ENST00000463688 RPS12P25398 132 aaKnown RBP17.03■□□□□ 0.32
COMMD3-205ENST00000463688 MMP14P50281 582 aa17.03■□□□□ 0.32
COMMD3-205ENST00000463688 EAPPQ56P03 285 aaPredicted RBP17.03■□□□□ 0.32
COMMD3-205ENST00000463688 UBE3BQ7Z3V4 1068 aa17.03■□□□□ 0.32
COMMD3-205ENST00000463688 MPHOSPH8Q99549 860 aa17.03■□□□□ 0.32
COMMD3-205ENST00000463688 ADARB2Q9NS39 739 aaKnown RBP17.03■□□□□ 0.32
COMMD3-205ENST00000463688 H7C1D1 291 aa17.02■□□□□ 0.31
COMMD3-205ENST00000463688 KCNA4P22459 653 aa17.02■□□□□ 0.31
COMMD3-205ENST00000463688 G2E3Q7L622 706 aa17.02■□□□□ 0.31
COMMD3-205ENST00000463688 TTLL11Q8NHH1 800 aa17.02■□□□□ 0.31
COMMD3-205ENST00000463688 C9orf78Q9NZ63 289 aaPredicted RBP17.02■□□□□ 0.31
COMMD3-205ENST00000463688 TIAM2Q8IVF5 1701 aa17.01■□□□□ 0.31
COMMD3-205ENST00000463688 CWF19L2Q2TBE0 894 aaKnown RBP17.01■□□□□ 0.31
COMMD3-205ENST00000463688 ALDH1L2Q3SY69 923 aa17.01■□□□□ 0.31
COMMD3-205ENST00000463688 ZC3H15Q8WU90 426 aaKnown RBP17.01■□□□□ 0.31
COMMD3-205ENST00000463688 DPF2Q92785 391 aa17.01■□□□□ 0.31
COMMD3-205ENST00000463688 SRCIN1Q9C0H9 1055 aa17.01■□□□□ 0.31
COMMD3-205ENST00000463688 CXCL9Q07325 125 aa17■□□□□ 0.31
COMMD3-205ENST00000463688 SLFN5Q08AF3 891 aa17■□□□□ 0.31
COMMD3-205ENST00000463688 TBC1D16Q8TBP0 767 aa17■□□□□ 0.31
COMMD3-205ENST00000463688 CREBZFQ9NS37 354 aa17■□□□□ 0.31
COMMD3-205ENST00000463688 LEMD3Q9Y2U8 911 aa17■□□□□ 0.31
COMMD3-205ENST00000463688 ANKRD18BA2A2Z9 1011 aa16.99■□□□□ 0.31
COMMD3-205ENST00000463688 UFL1O94874 794 aa16.99■□□□□ 0.31
COMMD3-205ENST00000463688 GPSM2P81274 684 aa16.99■□□□□ 0.31
COMMD3-205ENST00000463688 IFIT5Q13325 482 aaKnown RBP16.99■□□□□ 0.31
COMMD3-205ENST00000463688 BEND3Q5T5X7 828 aa16.99■□□□□ 0.31
COMMD3-205ENST00000463688 PODNQ7Z5L7 613 aa16.99■□□□□ 0.31
COMMD3-205ENST00000463688 CNKSR2Q8WXI2 1034 aa16.99■□□□□ 0.31
COMMD3-205ENST00000463688 GPRC5DQ9NZD1 345 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms