RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 TTLL11Q8NHH1 800 aa14.84□□□□□ -0.03
CPNE1-221ENST00000462352 RBM17Q96I25 401 aaKnown RBP14.84□□□□□ -0.03
CPNE1-221ENST00000462352 KAZALD1Q96I82 304 aa14.84□□□□□ -0.03
CPNE1-221ENST00000462352 BRCA1P38398 1863 aaKnown RBP14.84□□□□□ -0.03
CPNE1-221ENST00000462352 GNAI3P08754 354 aa14.83□□□□□ -0.04
CPNE1-221ENST00000462352 ALDH1B1P30837 517 aa14.83□□□□□ -0.04
CPNE1-221ENST00000462352 CCDC152Q4G0S7 254 aa14.83□□□□□ -0.04
CPNE1-221ENST00000462352 DALRD3Q5D0E6 543 aaKnown RBP14.83□□□□□ -0.04
CPNE1-221ENST00000462352 EPHA10Q5JZY3 1008 aa14.83□□□□□ -0.04
CPNE1-221ENST00000462352 DDX46Q7L014 1031 aaKnown RBP14.83□□□□□ -0.04
CPNE1-221ENST00000462352 TTLL6Q8N841 843 aa14.83□□□□□ -0.04
CPNE1-221ENST00000462352 CNKSR1Q969H4 720 aa14.83□□□□□ -0.04
CPNE1-221ENST00000462352 CCDC85AQ96PX6 553 aaPredicted RBP14.83□□□□□ -0.04
CPNE1-221ENST00000462352 CRAMP1Q96RY5 1269 aa14.83□□□□□ -0.04
CPNE1-221ENST00000462352 BCS1LQ9Y276 419 aa14.83□□□□□ -0.04
CPNE1-221ENST00000462352 CSF1RP07333 972 aa14.82□□□□□ -0.04
CPNE1-221ENST00000462352 MVPQ14764 893 aaKnown RBP14.82□□□□□ -0.04
CPNE1-221ENST00000462352 PRPF40BQ6NWY9 871 aaKnown RBP14.82□□□□□ -0.04
CPNE1-221ENST00000462352 PELP1Q8IZL8 1130 aaKnown RBP14.82□□□□□ -0.04
CPNE1-221ENST00000462352 BICC1Q9H694 974 aaKnown RBP14.82□□□□□ -0.04
CPNE1-221ENST00000462352 COG6Q9Y2V7 657 aa14.82□□□□□ -0.04
CPNE1-221ENST00000462352 MYH3P11055 1940 aa14.82□□□□□ -0.04
CPNE1-221ENST00000462352 ZBTB7BO15156 539 aaPredicted RBP14.81□□□□□ -0.04
CPNE1-221ENST00000462352 LMBR1LQ6UX01 489 aa14.81□□□□□ -0.04
CPNE1-221ENST00000462352 GREM2Q9H772 168 aa14.81□□□□□ -0.04
CPNE1-221ENST00000462352 SEC31BQ9NQW1 1179 aa14.81□□□□□ -0.04
CPNE1-221ENST00000462352 SUPT16HQ9Y5B9 1047 aaKnown RBP14.81□□□□□ -0.04
CPNE1-221ENST00000462352 YBX3P16989 372 aaKnown RBP eCLIP14.8□□□□□ -0.04
CPNE1-221ENST00000462352 GRAPQ13588 217 aa14.8□□□□□ -0.04
CPNE1-221ENST00000462352 FAM161AQ3B820 660 aa14.8□□□□□ -0.04
CPNE1-221ENST00000462352 RABL6Q3YEC7 729 aaPredicted RBP14.8□□□□□ -0.04
CPNE1-221ENST00000462352 ANKRD44Q8N8A2 993 aa14.8□□□□□ -0.04
CPNE1-221ENST00000462352 GRAPLQ8TC17 118 aaPredicted RBP14.8□□□□□ -0.04
CPNE1-221ENST00000462352 DDX19BQ9UMR2 479 aa14.8□□□□□ -0.04
CPNE1-221ENST00000462352 HDAC5Q9UQL6 1122 aa14.8□□□□□ -0.04
CPNE1-221ENST00000462352 LRRFIP2Q9Y608 721 aaKnown RBP14.8□□□□□ -0.04
CPNE1-221ENST00000462352 RTL9Q8NET4 1388 aa14.8□□□□□ -0.04
CPNE1-221ENST00000462352 COL4A1P02462 1669 aa14.79□□□□□ -0.04
CPNE1-221ENST00000462352 ITGA6P23229 1130 aa14.79□□□□□ -0.04
CPNE1-221ENST00000462352 GPR162Q16538 588 aa14.79□□□□□ -0.04
CPNE1-221ENST00000462352 SLX4Q8IY92 1834 aa14.79□□□□□ -0.04
CPNE1-221ENST00000462352 CELF1Q92879 486 aaKnown RBP14.79□□□□□ -0.04
CPNE1-221ENST00000462352 ZNF219Q9P2Y4 722 aaPredicted RBP14.79□□□□□ -0.04
CPNE1-221ENST00000462352 CHMP3Q9Y3E7 222 aa14.79□□□□□ -0.04
CPNE1-221ENST00000462352 CACNA1SQ13698 1873 aa14.78□□□□□ -0.04
CPNE1-221ENST00000462352 PPEF1O14829 653 aaPredicted RBP14.78□□□□□ -0.04
CPNE1-221ENST00000462352 C21orf2O43822 256 aa14.78□□□□□ -0.04
CPNE1-221ENST00000462352 BBOX1O75936 387 aa14.78□□□□□ -0.04
CPNE1-221ENST00000462352 GNAI2P04899 355 aa14.78□□□□□ -0.04
CPNE1-221ENST00000462352 C7orf43Q8WVR3 580 aa14.78□□□□□ -0.04
CPNE1-221ENST00000462352 TAF1P21675 1872 aa14.78□□□□□ -0.04
CPNE1-221ENST00000462352 GOLGB1Q14789 3259 aaKnown RBP14.77□□□□□ -0.04
CPNE1-221ENST00000462352 RPS8P62241 208 aaKnown RBP14.77□□□□□ -0.05
CPNE1-221ENST00000462352 IFIT5Q13325 482 aaKnown RBP14.77□□□□□ -0.05
CPNE1-221ENST00000462352 CDC5LQ99459 802 aaKnown RBP14.77□□□□□ -0.05
CPNE1-221ENST00000462352 ARFGEF1Q9Y6D6 1849 aa14.77□□□□□ -0.05
CPNE1-221ENST00000462352 ANKRD18BA2A2Z9 1011 aa14.76□□□□□ -0.05
CPNE1-221ENST00000462352 DCAF8L1A6NGE4 600 aa14.76□□□□□ -0.05
CPNE1-221ENST00000462352 CCDC57Q2TAC2 916 aa14.76□□□□□ -0.05
CPNE1-221ENST00000462352 OLFM4Q6UX06 510 aa14.76□□□□□ -0.05
CPNE1-221ENST00000462352 TMC4Q7Z404 712 aa14.76□□□□□ -0.05
CPNE1-221ENST00000462352 SLC51AQ86UW1 340 aa14.76□□□□□ -0.05
CPNE1-221ENST00000462352 ANKRD18AQ8IVF6 992 aa14.76□□□□□ -0.05
CPNE1-221ENST00000462352 C1orf115Q9H7X2 142 aa14.76□□□□□ -0.05
CPNE1-221ENST00000462352 GRIN3BO60391 1043 aa14.75□□□□□ -0.05
CPNE1-221ENST00000462352 IGHMBP2P38935 993 aaKnown RBP14.75□□□□□ -0.05
CPNE1-221ENST00000462352 CHMP4BQ9H444 224 aaKnown RBP14.75□□□□□ -0.05
CPNE1-221ENST00000462352 ZBTB40Q9NUA8 1239 aa14.75□□□□□ -0.05
CPNE1-221ENST00000462352 ATP6V0A2Q9Y487 856 aa14.75□□□□□ -0.05
CPNE1-221ENST00000462352 CENPBP07199 599 aaPredicted RBP14.74□□□□□ -0.05
CPNE1-221ENST00000462352 MTX1Q13505 466 aa14.74□□□□□ -0.05
CPNE1-221ENST00000462352 CCDC93Q567U6 631 aa14.74□□□□□ -0.05
CPNE1-221ENST00000462352 TAF7LQ5H9L4 462 aa14.74□□□□□ -0.05
CPNE1-221ENST00000462352 SOGA3Q5TF21 947 aa14.74□□□□□ -0.05
CPNE1-221ENST00000462352 CC2D2BQ6DHV5 1058 aa14.74□□□□□ -0.05
CPNE1-221ENST00000462352 SP8Q8IXZ3 490 aa14.74□□□□□ -0.05
CPNE1-221ENST00000462352 ZNF594Q96JF6 807 aaPredicted RBP14.74□□□□□ -0.05
CPNE1-221ENST00000462352 CRBNQ96SW2 442 aa14.74□□□□□ -0.05
CPNE1-221ENST00000462352 RFX5P48382 616 aaPredicted RBP14.73□□□□□ -0.05
CPNE1-221ENST00000462352 ARHGAP27Q6ZUM4 889 aa14.73□□□□□ -0.05
CPNE1-221ENST00000462352 MPHOSPH8Q99549 860 aa14.73□□□□□ -0.05
CPNE1-221ENST00000462352 TMX4Q9H1E5 349 aaPredicted RBP14.73□□□□□ -0.05
CPNE1-221ENST00000462352 BSDC1Q9NW68 430 aaPredicted RBP14.73□□□□□ -0.05
CPNE1-221ENST00000462352 SNED1Q8TER0 1413 aa14.73□□□□□ -0.05
CPNE1-221ENST00000462352 LRRC37AA6NMS7 1700 aa14.72□□□□□ -0.05
CPNE1-221ENST00000462352 UTRNP46939 3433 aa14.72□□□□□ -0.05
CPNE1-221ENST00000462352 SRGAP3O43295 1099 aa14.72□□□□□ -0.05
CPNE1-221ENST00000462352 RTKN2Q8IZC4 609 aa14.72□□□□□ -0.05
CPNE1-221ENST00000462352 KLHDC4Q8TBB5 520 aa14.72□□□□□ -0.05
CPNE1-221ENST00000462352 SPEF2Q9C093 1822 aa14.71□□□□□ -0.05
CPNE1-221ENST00000462352 PNMA6EA0A0J9YXQ4 647 aa14.71□□□□□ -0.05
CPNE1-221ENST00000462352 NFKBIEO00221 500 aa14.71□□□□□ -0.05
CPNE1-221ENST00000462352 ATP8B2P98198 1209 aa14.71□□□□□ -0.05
CPNE1-221ENST00000462352 PTPN12Q05209 780 aaKnown RBP14.71□□□□□ -0.05
CPNE1-221ENST00000462352 GRIPAP1Q4V328 841 aa14.71□□□□□ -0.05
CPNE1-221ENST00000462352 CEP85Q6P2H3 762 aa14.71□□□□□ -0.05
CPNE1-221ENST00000462352 LDHAL6AQ6ZMR3 332 aa14.71□□□□□ -0.05
CPNE1-221ENST00000462352 PUS3Q9BZE2 481 aaKnown RBP14.71□□□□□ -0.05
CPNE1-221ENST00000462352 MINPP1Q9UNW1 487 aa14.71□□□□□ -0.05
CPNE1-221ENST00000462352 GPSM2P81274 684 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms