RNA–Protein interactions for RNA: ENST00000462324.2

PHGDH-203, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 5

Gene PHGDH, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-203ENST00000462324 C3orf67Q6ZVT6 689 aa16.49■□□□□ 0.23
PHGDH-203ENST00000462324 DDX19BQ9UMR2 479 aa16.49■□□□□ 0.23
PHGDH-203ENST00000462324 BBOX1O75936 387 aa16.48■□□□□ 0.23
PHGDH-203ENST00000462324 CENPBP07199 599 aaPredicted RBP16.48■□□□□ 0.23
PHGDH-203ENST00000462324 FOXO4P98177 505 aa16.48■□□□□ 0.23
PHGDH-203ENST00000462324 SUCLG2Q96I99 432 aa16.48■□□□□ 0.23
PHGDH-203ENST00000462324 KIF13BQ9NQT8 1826 aa16.47■□□□□ 0.23
PHGDH-203ENST00000462324 ZBTB7BO15156 539 aaPredicted RBP16.47■□□□□ 0.23
PHGDH-203ENST00000462324 TMC4Q7Z404 712 aa16.47■□□□□ 0.23
PHGDH-203ENST00000462324 MEIS3Q99687 375 aa16.47■□□□□ 0.23
PHGDH-203ENST00000462324 TMX4Q9H1E5 349 aaPredicted RBP16.47■□□□□ 0.23
PHGDH-203ENST00000462324 COG6Q9Y2V7 657 aa16.47■□□□□ 0.23
PHGDH-203ENST00000462324 SUPT16HQ9Y5B9 1047 aaKnown RBP16.47■□□□□ 0.23
PHGDH-203ENST00000462324 GNAI2P04899 355 aa16.46■□□□□ 0.23
PHGDH-203ENST00000462324 GRAPQ13588 217 aa16.46■□□□□ 0.23
PHGDH-203ENST00000462324 LMBR1LQ6UX01 489 aa16.46■□□□□ 0.23
PHGDH-203ENST00000462324 GRAPLQ8TC17 118 aaPredicted RBP16.46■□□□□ 0.23
PHGDH-203ENST00000462324 CDC5LQ99459 802 aaKnown RBP16.46■□□□□ 0.23
PHGDH-203ENST00000462324 BCS1LQ9Y276 419 aa16.46■□□□□ 0.23
PHGDH-203ENST00000462324 RTL9Q8NET4 1388 aa16.46■□□□□ 0.23
PHGDH-203ENST00000462324 ANKRD18BA2A2Z9 1011 aa16.45■□□□□ 0.22
PHGDH-203ENST00000462324 RPS8P62241 208 aaKnown RBP16.45■□□□□ 0.22
PHGDH-203ENST00000462324 IFIT5Q13325 482 aaKnown RBP16.45■□□□□ 0.22
PHGDH-203ENST00000462324 GPR162Q16538 588 aa16.45■□□□□ 0.22
PHGDH-203ENST00000462324 CCDC57Q2TAC2 916 aa16.45■□□□□ 0.22
PHGDH-203ENST00000462324 RABL6Q3YEC7 729 aaPredicted RBP16.45■□□□□ 0.22
PHGDH-203ENST00000462324 GRIPAP1Q4V328 841 aa16.45■□□□□ 0.22
PHGDH-203ENST00000462324 EPHA10Q5JZY3 1008 aa16.45■□□□□ 0.22
PHGDH-203ENST00000462324 SOGA3Q5TF21 947 aa16.45■□□□□ 0.22
PHGDH-203ENST00000462324 CC2D2BQ6DHV5 1058 aa16.45■□□□□ 0.22
PHGDH-203ENST00000462324 PRPF40BQ6NWY9 871 aaKnown RBP16.45■□□□□ 0.22
PHGDH-203ENST00000462324 BICC1Q9H694 974 aaKnown RBP16.45■□□□□ 0.22
PHGDH-203ENST00000462324 CHMP3Q9Y3E7 222 aa16.45■□□□□ 0.22
PHGDH-203ENST00000462324 GRIN3BO60391 1043 aa16.44■□□□□ 0.22
PHGDH-203ENST00000462324 C20orf194Q5TEA3 1177 aa16.44■□□□□ 0.22
PHGDH-203ENST00000462324 ANKRD18AQ8IVF6 992 aa16.44■□□□□ 0.22
PHGDH-203ENST00000462324 PELP1Q8IZL8 1130 aaKnown RBP16.44■□□□□ 0.22
PHGDH-203ENST00000462324 KAZALD1Q96I82 304 aa16.44■□□□□ 0.22
PHGDH-203ENST00000462324 CCDC85AQ96PX6 553 aaPredicted RBP16.44■□□□□ 0.22
PHGDH-203ENST00000462324 GREM2Q9H772 168 aa16.44■□□□□ 0.22
PHGDH-203ENST00000462324 LRRFIP2Q9Y608 721 aaKnown RBP16.44■□□□□ 0.22
PHGDH-203ENST00000462324 ITGA6P23229 1130 aa16.43■□□□□ 0.22
PHGDH-203ENST00000462324 IGHMBP2P38935 993 aaKnown RBP16.43■□□□□ 0.22
PHGDH-203ENST00000462324 ANKRD44Q8N8A2 993 aa16.43■□□□□ 0.22
PHGDH-203ENST00000462324 SEC31BQ9NQW1 1179 aa16.43■□□□□ 0.22
PHGDH-203ENST00000462324 ANKRD31Q8N7Z5 1873 aa16.43■□□□□ 0.22
PHGDH-203ENST00000462324 PPEF1O14829 653 aaPredicted RBP16.42■□□□□ 0.22
PHGDH-203ENST00000462324 SP8Q8IXZ3 490 aa16.42■□□□□ 0.22
PHGDH-203ENST00000462324 C21orf2O43822 256 aa16.41■□□□□ 0.22
PHGDH-203ENST00000462324 FAM161AQ3B820 660 aa16.41■□□□□ 0.22
PHGDH-203ENST00000462324 TAF7LQ5H9L4 462 aa16.41■□□□□ 0.22
PHGDH-203ENST00000462324 C7orf43Q8WVR3 580 aa16.41■□□□□ 0.22
PHGDH-203ENST00000462324 CELF1Q92879 486 aaKnown RBP16.41■□□□□ 0.22
PHGDH-203ENST00000462324 MPHOSPH8Q99549 860 aa16.41■□□□□ 0.22
PHGDH-203ENST00000462324 ZBTB40Q9NUA8 1239 aa16.41■□□□□ 0.22
PHGDH-203ENST00000462324 BSDC1Q9NW68 430 aaPredicted RBP16.41■□□□□ 0.22
PHGDH-203ENST00000462324 WWC3Q9ULE0 1092 aa16.41■□□□□ 0.22
PHGDH-203ENST00000462324 ATP6V0A2Q9Y487 856 aa16.41■□□□□ 0.22
PHGDH-203ENST00000462324 TNRC6CQ9HCJ0 1690 aaKnown RBP16.4■□□□□ 0.22
PHGDH-203ENST00000462324 DDX60Q8IY21 1712 aaKnown RBP16.4■□□□□ 0.22
PHGDH-203ENST00000462324 MTX1Q13505 466 aa16.4■□□□□ 0.22
PHGDH-203ENST00000462324 AAMPQ13685 434 aa16.4■□□□□ 0.22
PHGDH-203ENST00000462324 RTKN2Q8IZC4 609 aa16.4■□□□□ 0.22
PHGDH-203ENST00000462324 N4BP2Q86UW6 1770 aaPredicted RBP16.39■□□□□ 0.21
PHGDH-203ENST00000462324 YBX3P16989 372 aaKnown RBP eCLIP16.39■□□□□ 0.212e-7■□□□□ 10.4
PHGDH-203ENST00000462324 CCDC93Q567U6 631 aa16.39■□□□□ 0.21
PHGDH-203ENST00000462324 KIAA1551Q9HCM1 1747 aa16.39■□□□□ 0.21
PHGDH-203ENST00000462324 LAMB2P55268 1798 aa16.38■□□□□ 0.21
PHGDH-203ENST00000462324 ATP8B2P98198 1209 aa16.38■□□□□ 0.21
PHGDH-203ENST00000462324 LDHAL6AQ6ZMR3 332 aa16.38■□□□□ 0.21
PHGDH-203ENST00000462324 ARHGAP27Q6ZUM4 889 aa16.38■□□□□ 0.21
PHGDH-203ENST00000462324 RPAP2Q8IXW5 612 aaPredicted RBP16.38■□□□□ 0.21
PHGDH-203ENST00000462324 ZNF219Q9P2Y4 722 aaPredicted RBP16.38■□□□□ 0.21
PHGDH-203ENST00000462324 SRGAP3O43295 1099 aa16.37■□□□□ 0.21
PHGDH-203ENST00000462324 YY1P25490 414 aa16.37■□□□□ 0.21
PHGDH-203ENST00000462324 FBXO3Q9UK99 471 aa16.37■□□□□ 0.21
PHGDH-203ENST00000462324 MPNDQ8N594 471 aa16.36■□□□□ 0.21
PHGDH-203ENST00000462324 SUPT20HQ8NEM7 779 aa16.36■□□□□ 0.21
PHGDH-203ENST00000462324 CRBNQ96SW2 442 aa16.36■□□□□ 0.21
PHGDH-203ENST00000462324 ANKRD2Q9GZV1 360 aa16.36■□□□□ 0.21
PHGDH-203ENST00000462324 CNNM1Q9NRU3 951 aa16.36■□□□□ 0.21
PHGDH-203ENST00000462324 COL11A2P13942 1736 aaPredicted RBP16.36■□□□□ 0.21
PHGDH-203ENST00000462324 DLEC1Q9Y238 1755 aa16.36■□□□□ 0.21
PHGDH-203ENST00000462324 HMMRO75330 724 aa16.35■□□□□ 0.21
PHGDH-203ENST00000462324 RFX5P48382 616 aaPredicted RBP16.35■□□□□ 0.21
PHGDH-203ENST00000462324 PSMD1Q99460 953 aa16.35■□□□□ 0.21
PHGDH-203ENST00000462324 C1orf115Q9H7X2 142 aa16.35■□□□□ 0.21
PHGDH-203ENST00000462324 MINPP1Q9UNW1 487 aa16.35■□□□□ 0.21
PHGDH-203ENST00000462324 FKBP4Q02790 459 aaKnown RBP eCLIP16.34■□□□□ 0.21
PHGDH-203ENST00000462324 PTPN12Q05209 780 aaKnown RBP16.34■□□□□ 0.21
PHGDH-203ENST00000462324 CEP85Q6P2H3 762 aa16.34■□□□□ 0.21
PHGDH-203ENST00000462324 DPP8Q6V1X1 898 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-203ENST00000462324 SSH3Q8TE77 659 aa16.34■□□□□ 0.21
PHGDH-203ENST00000462324 ZNF594Q96JF6 807 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-203ENST00000462324 VPS33BQ9H267 617 aa16.34■□□□□ 0.21
PHGDH-203ENST00000462324 COPRSQ9NQ92 184 aa16.34■□□□□ 0.21
PHGDH-203ENST00000462324 PODXL2Q9NZ53 605 aa16.34■□□□□ 0.21
PHGDH-203ENST00000462324 ANKIB1Q9P2G1 1089 aa16.34■□□□□ 0.21
PHGDH-203ENST00000462324 NSFL1CQ9UNZ2 370 aaKnown RBP16.34■□□□□ 0.21
PHGDH-203ENST00000462324 LTBP3Q9NS15 1303 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms