RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 DPP8Q6V1X1 898 aaPredicted RBP26.89■■□□□ 1.9
SRM-202ENST00000459997 SF3B3Q15393 1217 aaKnown RBP26.88■■□□□ 1.89
SRM-202ENST00000459997 AOC3Q16853 763 aa26.88■■□□□ 1.89
SRM-202ENST00000459997 NIM1KQ8IY84 436 aa26.88■■□□□ 1.89
SRM-202ENST00000459997 ZBTB38Q8NAP3 1195 aaPredicted RBP26.88■■□□□ 1.89
SRM-202ENST00000459997 SUPT20HQ8NEM7 779 aa26.88■■□□□ 1.89
SRM-202ENST00000459997 HACL1Q9UJ83 578 aa26.88■■□□□ 1.89
SRM-202ENST00000459997 TMC4Q7Z404 712 aa26.87■■□□□ 1.89
SRM-202ENST00000459997 FAM9BQ8IZU0 186 aa26.87■■□□□ 1.89
SRM-202ENST00000459997 MPNDQ8N594 471 aa26.87■■□□□ 1.89
SRM-202ENST00000459997 CCDC191Q8NCU4 936 aa26.87■■□□□ 1.89
SRM-202ENST00000459997 METTL22Q9BUU2 404 aaPredicted RBP26.87■■□□□ 1.89
SRM-202ENST00000459997 RTFDC1Q9BY42 306 aaPredicted RBP26.87■■□□□ 1.89
SRM-202ENST00000459997 GJA3Q9Y6H8 435 aa26.87■■□□□ 1.89
SRM-202ENST00000459997 LRRC37AA6NMS7 1700 aa26.87■■□□□ 1.89
SRM-202ENST00000459997 FANCIQ9NVI1 1328 aa26.87■■□□□ 1.89
SRM-202ENST00000459997 VPS33BQ9H267 617 aa26.86■■□□□ 1.89
SRM-202ENST00000459997 MAP3K2Q9Y2U5 619 aa26.86■■□□□ 1.89
SRM-202ENST00000459997 LDHDQ86WU2 507 aa26.85■■□□□ 1.89
SRM-202ENST00000459997 WDR63Q8IWG1 891 aa26.85■■□□□ 1.89
SRM-202ENST00000459997 CWC25Q9NXE8 425 aaPredicted RBP26.85■■□□□ 1.89
SRM-202ENST00000459997 EPHX2P34913 555 aa26.84■■□□□ 1.89
SRM-202ENST00000459997 EAPPQ56P03 285 aaPredicted RBP26.84■■□□□ 1.89
SRM-202ENST00000459997 KSR2Q6VAB6 950 aa26.84■■□□□ 1.89
SRM-202ENST00000459997 CELF1Q92879 486 aaKnown RBP26.84■■□□□ 1.89
SRM-202ENST00000459997 COL4A1P02462 1669 aa26.83■■□□□ 1.89
SRM-202ENST00000459997 PI4KAP2A4QPH2 592 aa26.83■■□□□ 1.89
SRM-202ENST00000459997 PCCAP05165 728 aaPredicted RBP26.83■■□□□ 1.89
SRM-202ENST00000459997 HSP90B1P14625 803 aaKnown RBP26.83■■□□□ 1.89
SRM-202ENST00000459997 PI4KAP1Q8N8J0 262 aa26.83■■□□□ 1.89
SRM-202ENST00000459997 KLRG1Q96E93 195 aa26.83■■□□□ 1.89
SRM-202ENST00000459997 SLC4A2P04920 1241 aa26.82■■□□□ 1.88
SRM-202ENST00000459997 DUOX1Q9NRD9 1551 aa26.82■■□□□ 1.88
SRM-202ENST00000459997 G2E3Q7L622 706 aa26.81■■□□□ 1.88
SRM-202ENST00000459997 JARID2Q92833 1246 aaPredicted RBP26.81■■□□□ 1.88
SRM-202ENST00000459997 ADAMTSL1Q8N6G6 1762 aa26.81■■□□□ 1.88
SRM-202ENST00000459997 LTBP1Q14766 1721 aa26.8■■□□□ 1.88
SRM-202ENST00000459997 LMOD1P29536 600 aaPredicted RBP26.8■■□□□ 1.88
SRM-202ENST00000459997 KIAA2012Q0VF49 1180 aa26.8■■□□□ 1.88
SRM-202ENST00000459997 PNMA8AQ86V59 439 aaPredicted RBP26.8■■□□□ 1.88
SRM-202ENST00000459997 ZNRF3Q9ULT6 936 aa26.8■■□□□ 1.88
SRM-202ENST00000459997 CLEC11AQ9Y240 323 aa26.8■■□□□ 1.88
SRM-202ENST00000459997 NEXNQ0ZGT2 675 aa26.79■■□□□ 1.88
SRM-202ENST00000459997 PDE8AO60658 829 aa26.78■■□□□ 1.88
SRM-202ENST00000459997 IGKV5-2P06315 115 aa26.78■■□□□ 1.88
SRM-202ENST00000459997 EXOSC9Q06265 439 aaKnown RBP26.78■■□□□ 1.88
SRM-202ENST00000459997 NSFL1CQ9UNZ2 370 aaKnown RBP26.78■■□□□ 1.88
SRM-202ENST00000459997 SCNN1DP51172 638 aa26.77■■□□□ 1.88
SRM-202ENST00000459997 RPS8P62241 208 aaKnown RBP26.77■■□□□ 1.88
SRM-202ENST00000459997 CCDC152Q4G0S7 254 aa26.77■■□□□ 1.88
SRM-202ENST00000459997 SEC31BQ9NQW1 1179 aa26.77■■□□□ 1.88
SRM-202ENST00000459997 CDHR2Q9BYE9 1310 aa26.76■■□□□ 1.87
SRM-202ENST00000459997 VAMP4O75379 141 aa26.76■■□□□ 1.87
SRM-202ENST00000459997 CXCL9Q07325 125 aa26.76■■□□□ 1.87
SRM-202ENST00000459997 FLIIQ13045 1269 aa26.76■■□□□ 1.87
SRM-202ENST00000459997 SPINK5Q9NQ38 1064 aaPredicted RBP26.76■■□□□ 1.87
SRM-202ENST00000459997 EPS15P42566 896 aa26.75■■□□□ 1.87
SRM-202ENST00000459997 GPSM2P81274 684 aa26.75■■□□□ 1.87
SRM-202ENST00000459997 CWF19L2Q2TBE0 894 aaKnown RBP26.75■■□□□ 1.87
SRM-202ENST00000459997 CCDC85AQ96PX6 553 aaPredicted RBP26.75■■□□□ 1.87
SRM-202ENST00000459997 PASKQ96RG2 1323 aa26.74■■□□□ 1.87
SRM-202ENST00000459997 MYH16Q9H6N6 1097 aa26.74■■□□□ 1.87
SRM-202ENST00000459997 NEURL1BA8MQ27 555 aa26.73■■□□□ 1.87
SRM-202ENST00000459997 C6orf229H3BNL8 230 aa26.73■■□□□ 1.87
SRM-202ENST00000459997 FKBP5Q13451 457 aaPredicted RBP26.73■■□□□ 1.87
SRM-202ENST00000459997 WASHC4Q2M389 1173 aa26.73■■□□□ 1.87
SRM-202ENST00000459997 JMYQ8N9B5 988 aa26.73■■□□□ 1.87
SRM-202ENST00000459997 CREBZFQ9NS37 354 aa26.73■■□□□ 1.87
SRM-202ENST00000459997 CACNA1FO60840 1977 aa26.73■■□□□ 1.87
SRM-202ENST00000459997 RAD17O75943 681 aa26.72■■□□□ 1.87
SRM-202ENST00000459997 ITGBL1O95965 494 aaPredicted RBP26.72■■□□□ 1.87
SRM-202ENST00000459997 MAP1SQ66K74 1059 aaPredicted RBP26.72■■□□□ 1.87
SRM-202ENST00000459997 CIAPIN1Q6FI81 312 aa26.72■■□□□ 1.87
SRM-202ENST00000459997 POLLQ9UGP5 575 aa26.72■■□□□ 1.87
SRM-202ENST00000459997 CTSWP56202 376 aa26.71■■□□□ 1.87
SRM-202ENST00000459997 GPRC5DQ9NZD1 345 aa26.71■■□□□ 1.87
SRM-202ENST00000459997 MYH3P11055 1940 aa26.71■■□□□ 1.87
SRM-202ENST00000459997 YDJCA8MPS7 323 aa26.7■■□□□ 1.86
SRM-202ENST00000459997 RIMBP2O15034 1052 aa26.7■■□□□ 1.86
SRM-202ENST00000459997 GMPSP49915 693 aaPredicted RBP26.7■■□□□ 1.86
SRM-202ENST00000459997 TNIP1Q15025 636 aa26.7■■□□□ 1.86
SRM-202ENST00000459997 CNTROBQ8N137 903 aa26.7■■□□□ 1.86
SRM-202ENST00000459997 USP50Q70EL3 339 aaPredicted RBP26.69■■□□□ 1.86
SRM-202ENST00000459997 UBE3BQ7Z3V4 1068 aa26.69■■□□□ 1.86
SRM-202ENST00000459997 TBC1D16Q8TBP0 767 aa26.69■■□□□ 1.86
SRM-202ENST00000459997 DNAAF4Q8WXU2 420 aa26.69■■□□□ 1.86
SRM-202ENST00000459997 EYA3Q99504 573 aa26.69■■□□□ 1.86
SRM-202ENST00000459997 ANKRD18AQ8IVF6 992 aa26.68■■□□□ 1.86
SRM-202ENST00000459997 GPR101Q96P66 508 aaPredicted RBP26.68■■□□□ 1.86
SRM-202ENST00000459997 BCL2L13Q9BXK5 485 aa26.68■■□□□ 1.86
SRM-202ENST00000459997 DBNDD1Q9H9R9 158 aa26.68■■□□□ 1.86
SRM-202ENST00000459997 ANKIB1Q9P2G1 1089 aa26.68■■□□□ 1.86
SRM-202ENST00000459997 H7C1W4 665 aa26.67■■□□□ 1.86
SRM-202ENST00000459997 GCKRQ14397 625 aa26.67■■□□□ 1.86
SRM-202ENST00000459997 TTLL11Q8NHH1 800 aa26.67■■□□□ 1.86
SRM-202ENST00000459997 ADARB2Q9NS39 739 aaKnown RBP26.67■■□□□ 1.86
SRM-202ENST00000459997 PODXL2Q9NZ53 605 aa26.67■■□□□ 1.86
SRM-202ENST00000459997 UFL1O94874 794 aa26.66■■□□□ 1.86
SRM-202ENST00000459997 CDC5LQ99459 802 aaKnown RBP26.66■■□□□ 1.86
SRM-202ENST00000459997 SPEF2Q9C093 1822 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms