RNA–Protein interactions for RNA: ENST00000456711.5

COMMD3-204, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-204ENST00000456711 CUEDC1Q9NWM3 386 aaPredicted RBP9.71□□□□□ -0.86
COMMD3-204ENST00000456711 SSH2Q76I76 1423 aa9.71□□□□□ -0.86
COMMD3-204ENST00000456711 IFT172Q9UG01 1749 aa9.7□□□□□ -0.86
COMMD3-204ENST00000456711 PHF20L1A8MW92 1017 aa9.7□□□□□ -0.86
COMMD3-204ENST00000456711 CHRNA2Q15822 529 aa9.7□□□□□ -0.86
COMMD3-204ENST00000456711 THRAP3Q9Y2W1 955 aaKnown RBP9.7□□□□□ -0.86
COMMD3-204ENST00000456711 MAP4K5Q9Y4K4 846 aa9.7□□□□□ -0.86
COMMD3-204ENST00000456711 KIAA0232Q92628 1395 aa9.7□□□□□ -0.86
COMMD3-204ENST00000456711 ATP7BP35670 1465 aa9.7□□□□□ -0.86
COMMD3-204ENST00000456711 TOPAZ1Q8N9V7 1692 aa9.7□□□□□ -0.86
COMMD3-204ENST00000456711 ARHGEF28Q8N1W1 1705 aaKnown RBP9.7□□□□□ -0.86
COMMD3-204ENST00000456711 HSPA1AP0DMV8 641 aaKnown RBP9.69□□□□□ -0.86
COMMD3-204ENST00000456711 HSPA1BP0DMV9 641 aaKnown RBP9.69□□□□□ -0.86
COMMD3-204ENST00000456711 CLTCL1P53675 1640 aa9.69□□□□□ -0.86
COMMD3-204ENST00000456711 EVA1CP58658 441 aa9.69□□□□□ -0.86
COMMD3-204ENST00000456711 PLEKHH1Q9ULM0 1364 aa9.68□□□□□ -0.86
COMMD3-204ENST00000456711 KANK4Q5T7N3 995 aaPredicted RBP9.68□□□□□ -0.86
COMMD3-204ENST00000456711 LARP1Q6PKG0 1096 aaKnown RBP9.68□□□□□ -0.86
COMMD3-204ENST00000456711 AGBL1Q96MI9 1066 aa9.68□□□□□ -0.86
COMMD3-204ENST00000456711 ENAMQ9NRM1 1142 aa9.68□□□□□ -0.86
COMMD3-204ENST00000456711 PAPPAQ13219 1627 aa9.67□□□□□ -0.86
COMMD3-204ENST00000456711 PER1O15534 1290 aaPredicted RBP9.67□□□□□ -0.86
COMMD3-204ENST00000456711 SSTR3P32745 418 aaPredicted RBP9.67□□□□□ -0.86
COMMD3-204ENST00000456711 PPP1R26Q5T8A7 1209 aaPredicted RBP9.67□□□□□ -0.86
COMMD3-204ENST00000456711 BEND7Q8N7W2 519 aaPredicted RBP9.67□□□□□ -0.86
COMMD3-204ENST00000456711 INSM2Q96T92 566 aaPredicted RBP9.67□□□□□ -0.86
COMMD3-204ENST00000456711 KIF1BO60333 1816 aa9.67□□□□□ -0.86
COMMD3-204ENST00000456711 FURINP09958 794 aa9.66□□□□□ -0.86
COMMD3-204ENST00000456711 PMFBP1Q8TBY8 1022 aa9.66□□□□□ -0.86
COMMD3-204ENST00000456711 STK26Q9P289 416 aa9.66□□□□□ -0.86
COMMD3-204ENST00000456711 LRRC37A3O60309 1634 aa9.66□□□□□ -0.86
COMMD3-204ENST00000456711 TULP4Q9NRJ4 1543 aa9.66□□□□□ -0.86
COMMD3-204ENST00000456711 BCL9O00512 1426 aa9.65□□□□□ -0.86
COMMD3-204ENST00000456711 KNDC1Q76NI1 1749 aa9.65□□□□□ -0.86
COMMD3-204ENST00000456711 PHRF1Q9P1Y6 1649 aaKnown RBP9.65□□□□□ -0.86
COMMD3-204ENST00000456711 TRMT44Q8IYL2 757 aaKnown RBP9.65□□□□□ -0.86
COMMD3-204ENST00000456711 PCDHB15Q9Y5E8 787 aa9.65□□□□□ -0.86
COMMD3-204ENST00000456711 GPRASP1Q5JY77 1395 aa9.64□□□□□ -0.87
COMMD3-204ENST00000456711 ABCC11Q96J66 1382 aa9.64□□□□□ -0.87
COMMD3-204ENST00000456711 ZC3H6P61129 1189 aaKnown RBP9.64□□□□□ -0.87
COMMD3-204ENST00000456711 DDB1Q16531 1140 aa9.64□□□□□ -0.87
COMMD3-204ENST00000456711 KRI1Q8N9T8 703 aaKnown RBP9.64□□□□□ -0.87
COMMD3-204ENST00000456711 RNF217Q8TC41 542 aa9.64□□□□□ -0.87
COMMD3-204ENST00000456711 QSER1Q2KHR3 1735 aa9.64□□□□□ -0.87
COMMD3-204ENST00000456711 NUP155O75694 1391 aa9.63□□□□□ -0.87
COMMD3-204ENST00000456711 MAGEB6P1A0A0J9YX57 407 aa9.63□□□□□ -0.87
COMMD3-204ENST00000456711 ZNF827Q17R98 1081 aa9.63□□□□□ -0.87
COMMD3-204ENST00000456711 AKAP12Q02952 1782 aa9.63□□□□□ -0.87
COMMD3-204ENST00000456711 LMO7Q8WWI1 1683 aa9.62□□□□□ -0.87
COMMD3-204ENST00000456711 KRBA1A5PL33 1030 aa9.62□□□□□ -0.87
COMMD3-204ENST00000456711 RELBQ01201 579 aa9.62□□□□□ -0.87
COMMD3-204ENST00000456711 FSTL1Q12841 308 aa9.62□□□□□ -0.87
COMMD3-204ENST00000456711 SH3BP5LQ7L8J4 393 aa9.62□□□□□ -0.87
COMMD3-204ENST00000456711 PODNQ7Z5L7 613 aa9.62□□□□□ -0.87
COMMD3-204ENST00000456711 NEDD1Q8NHV4 660 aa9.62□□□□□ -0.87
COMMD3-204ENST00000456711 PPLO60437 1756 aa9.62□□□□□ -0.87
COMMD3-204ENST00000456711 KIAA1210Q9ULL0 1709 aa9.62□□□□□ -0.87
COMMD3-204ENST00000456711 RPGRIP1LQ68CZ1 1315 aa9.61□□□□□ -0.87
COMMD3-204ENST00000456711 ACIN1Q9UKV3 1341 aaKnown RBP9.61□□□□□ -0.87
COMMD3-204ENST00000456711 LCE3BQ5TA77 95 aa9.61□□□□□ -0.87
COMMD3-204ENST00000456711 MARCH10Q8NA82 808 aaPredicted RBP9.61□□□□□ -0.87
COMMD3-204ENST00000456711 POLMQ9NP87 494 aaPredicted RBP9.61□□□□□ -0.87
COMMD3-204ENST00000456711 PGPEP1Q9NXJ5 209 aa9.61□□□□□ -0.87
COMMD3-204ENST00000456711 ANKARQ7Z5J8 1434 aa9.61□□□□□ -0.87
COMMD3-204ENST00000456711 BCRP11274 1271 aa9.6□□□□□ -0.87
COMMD3-204ENST00000456711 MLLT1Q03111 559 aaPredicted RBP9.6□□□□□ -0.87
COMMD3-204ENST00000456711 CRB1P82279 1406 aa9.59□□□□□ -0.87
COMMD3-204ENST00000456711 GPR25O00155 361 aa9.59□□□□□ -0.87
COMMD3-204ENST00000456711 RSBN1LQ6PCB5 846 aaPredicted RBP9.59□□□□□ -0.87
COMMD3-204ENST00000456711 ACDQ96AP0 544 aa9.59□□□□□ -0.87
COMMD3-204ENST00000456711 CARD14Q9BXL6 1004 aa9.59□□□□□ -0.87
COMMD3-204ENST00000456711 ZNF395Q9H8N7 513 aaPredicted RBP9.59□□□□□ -0.87
COMMD3-204ENST00000456711 NMRK2Q9NPI5 230 aa9.59□□□□□ -0.87
COMMD3-204ENST00000456711 MBIPQ9NS73 344 aa9.59□□□□□ -0.87
COMMD3-204ENST00000456711 COL5A2P05997 1499 aaPredicted RBP9.59□□□□□ -0.87
COMMD3-204ENST00000456711 PNPLA7Q6ZV29 1317 aa9.58□□□□□ -0.88
COMMD3-204ENST00000456711 C16orf71Q8IYS4 520 aaPredicted RBP9.58□□□□□ -0.88
COMMD3-204ENST00000456711 SIRT1Q96EB6 747 aa9.58□□□□□ -0.88
COMMD3-204ENST00000456711 KRTAP4-12Q9BQ66 201 aa9.58□□□□□ -0.88
COMMD3-204ENST00000456711 USP19O94966 1318 aa9.57□□□□□ -0.88
COMMD3-204ENST00000456711 WNK3Q9BYP7 1800 aa9.57□□□□□ -0.88
COMMD3-204ENST00000456711 ERFEQ4G0M1 354 aa9.57□□□□□ -0.88
COMMD3-204ENST00000456711 FOXD4L5Q5VV16 416 aaPredicted RBP9.57□□□□□ -0.88
COMMD3-204ENST00000456711 TMEM132EQ6IEE7 984 aa9.57□□□□□ -0.88
COMMD3-204ENST00000456711 CD2APQ9Y5K6 639 aa9.57□□□□□ -0.88
COMMD3-204ENST00000456711 ANKRD30BQ9BXX2 1392 aa9.57□□□□□ -0.88
COMMD3-204ENST00000456711 NHSQ6T4R5 1651 aa9.57□□□□□ -0.88
COMMD3-204ENST00000456711 TUBGCP6Q96RT7 1819 aa9.56□□□□□ -0.88
COMMD3-204ENST00000456711 BRD4O60885 1362 aaPredicted RBP9.56□□□□□ -0.88
COMMD3-204ENST00000456711 CPDO75976 1380 aa9.56□□□□□ -0.88
COMMD3-204ENST00000456711 RGS19P49795 217 aa9.56□□□□□ -0.88
COMMD3-204ENST00000456711 SNRPNP63162 240 aaKnown RBP9.56□□□□□ -0.88
COMMD3-204ENST00000456711 ZNF837Q96EG3 531 aaPredicted RBP9.56□□□□□ -0.88
COMMD3-204ENST00000456711 PRDM10Q9NQV6 1147 aa9.56□□□□□ -0.88
COMMD3-204ENST00000456711 LRRC4BQ9NT99 713 aa9.56□□□□□ -0.88
COMMD3-204ENST00000456711 VPS8Q8N3P4 1428 aa9.56□□□□□ -0.88
COMMD3-204ENST00000456711 YTHDC2Q9H6S0 1430 aaKnown RBP9.56□□□□□ -0.88
COMMD3-204ENST00000456711 ITGB7P26010 798 aa9.55□□□□□ -0.88
COMMD3-204ENST00000456711 TBC1D2Q9BYX2 928 aa9.55□□□□□ -0.88
COMMD3-204ENST00000456711 RTN4Q9NQC3 1192 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms