RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 C15orf52Q6ZUT6 534 aaKnown RBP6.34□□□□□ -1.39
RIF1-207ENST00000454583 ZBTB38Q8NAP3 1195 aaPredicted RBP6.34□□□□□ -1.39
RIF1-207ENST00000454583 RBM42Q9BTD8 480 aaKnown RBP6.34□□□□□ -1.39
RIF1-207ENST00000454583 BCL2L13Q9BXK5 485 aa6.34□□□□□ -1.39
RIF1-207ENST00000454583 BAZ2AQ9UIF9 1905 aaKnown RBP6.34□□□□□ -1.39
RIF1-207ENST00000454583 TRIM37O94972 964 aa6.34□□□□□ -1.39
RIF1-207ENST00000454583 SYNE4Q8N205 404 aa6.34□□□□□ -1.39
RIF1-207ENST00000454583 BACH2Q9BYV9 841 aa6.34□□□□□ -1.39
RIF1-207ENST00000454583 API5Q9BZZ5 524 aaKnown RBP6.34□□□□□ -1.39
RIF1-207ENST00000454583 USP35Q9P2H5 1018 aa6.34□□□□□ -1.39
RIF1-207ENST00000454583 KCNQ4P56696 695 aa6.33□□□□□ -1.4
RIF1-207ENST00000454583 ANKRD13DQ6ZTN6 518 aa6.33□□□□□ -1.4
RIF1-207ENST00000454583 PI4K2BQ8TCG2 481 aa6.33□□□□□ -1.4
RIF1-207ENST00000454583 RIPOR2Q9Y4F9 1068 aa6.33□□□□□ -1.4
RIF1-207ENST00000454583 FOXP2O15409 715 aa6.33□□□□□ -1.4
RIF1-207ENST00000454583 ABCB7O75027 752 aa6.33□□□□□ -1.4
RIF1-207ENST00000454583 VASPP50552 380 aaPredicted RBP6.33□□□□□ -1.4
RIF1-207ENST00000454583 SMC4Q9NTJ3 1288 aa6.33□□□□□ -1.4
RIF1-207ENST00000454583 CIAO1O76071 339 aa6.33□□□□□ -1.4
RIF1-207ENST00000454583 PRELPP51888 382 aa6.33□□□□□ -1.4
RIF1-207ENST00000454583 TTLL11Q8NHH1 800 aa6.33□□□□□ -1.4
RIF1-207ENST00000454583 ZNF512BQ96KM6 892 aaPredicted RBP6.33□□□□□ -1.4
RIF1-207ENST00000454583 SALL2Q9Y467 1007 aaPredicted RBP6.33□□□□□ -1.4
RIF1-207ENST00000454583 ATP6V1AP38606 617 aa6.32□□□□□ -1.4
RIF1-207ENST00000454583 SLC15A2Q16348 729 aa6.32□□□□□ -1.4
RIF1-207ENST00000454583 DDX19BQ9UMR2 479 aa6.32□□□□□ -1.4
RIF1-207ENST00000454583 DOCK1Q14185 1865 aa6.32□□□□□ -1.4
RIF1-207ENST00000454583 RTFDC1Q9BY42 306 aaPredicted RBP6.32□□□□□ -1.4
RIF1-207ENST00000454583 GRM8O00222 908 aa6.32□□□□□ -1.4
RIF1-207ENST00000454583 COG6Q9Y2V7 657 aa6.32□□□□□ -1.4
RIF1-207ENST00000454583 PDS5AQ29RF7 1337 aaKnown RBP6.31□□□□□ -1.4
RIF1-207ENST00000454583 GSPT1P15170 499 aaKnown RBP6.31□□□□□ -1.4
RIF1-207ENST00000454583 BICC1Q9H694 974 aaKnown RBP6.31□□□□□ -1.4
RIF1-207ENST00000454583 AOX1Q06278 1338 aa6.31□□□□□ -1.4
RIF1-207ENST00000454583 KAT6BQ8WYB5 2073 aa6.31□□□□□ -1.4
RIF1-207ENST00000454583 NFIXQ14938 502 aa6.31□□□□□ -1.4
RIF1-207ENST00000454583 ZNF384Q8TF68 577 aa6.31□□□□□ -1.4
RIF1-207ENST00000454583 SRP68Q9UHB9 627 aaKnown RBP6.31□□□□□ -1.4
RIF1-207ENST00000454583 ELL2O00472 640 aaPredicted RBP6.31□□□□□ -1.4
RIF1-207ENST00000454583 CENPQQ7L2Z9 268 aaPredicted RBP6.31□□□□□ -1.4
RIF1-207ENST00000454583 GPR108Q9NPR9 543 aa6.31□□□□□ -1.4
RIF1-207ENST00000454583 CCNL1Q9UK58 526 aaPredicted RBP6.31□□□□□ -1.4
RIF1-207ENST00000454583 PRR5LQ6MZQ0 368 aa6.3□□□□□ -1.4
RIF1-207ENST00000454583 RPAP2Q8IXW5 612 aaPredicted RBP6.3□□□□□ -1.4
RIF1-207ENST00000454583 SRCAPQ6ZRS2 3230 aa6.3□□□□□ -1.4
RIF1-207ENST00000454583 PODXL2Q9NZ53 605 aa6.3□□□□□ -1.4
RIF1-207ENST00000454583 TRPM7Q96QT4 1865 aa6.3□□□□□ -1.4
RIF1-207ENST00000454583 COL2A1P02458 1487 aaPredicted RBP6.3□□□□□ -1.4
RIF1-207ENST00000454583 ZBTB7CA1YPR0 619 aa6.29□□□□□ -1.4
RIF1-207ENST00000454583 TCERG1O14776 1098 aaKnown RBP6.29□□□□□ -1.4
RIF1-207ENST00000454583 KCNB2Q92953 911 aa6.29□□□□□ -1.4
RIF1-207ENST00000454583 IL25Q9H293 177 aa6.29□□□□□ -1.4
RIF1-207ENST00000454583 RPAP1Q9BWH6 1393 aaPredicted RBP6.29□□□□□ -1.4
RIF1-207ENST00000454583 HAP1P54257 671 aaPredicted RBP6.29□□□□□ -1.4
RIF1-207ENST00000454583 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.29□□□□□ -1.4
RIF1-207ENST00000454583 MED23Q9ULK4 1368 aa6.29□□□□□ -1.4
RIF1-207ENST00000454583 PLXNB2O15031 1838 aa6.29□□□□□ -1.4
RIF1-207ENST00000454583 PTCD1O75127 700 aaKnown RBP6.29□□□□□ -1.4
RIF1-207ENST00000454583 MEX3CQ5U5Q3 659 aaKnown RBP6.29□□□□□ -1.4
RIF1-207ENST00000454583 USPL1Q5W0Q7 1092 aa6.29□□□□□ -1.4
RIF1-207ENST00000454583 DZIP3Q86Y13 1208 aaKnown RBP6.29□□□□□ -1.4
RIF1-207ENST00000454583 PLEKHM2Q8IWE5 1019 aa6.29□□□□□ -1.4
RIF1-207ENST00000454583 STARD3NLO95772 234 aa6.28□□□□□ -1.4
RIF1-207ENST00000454583 DDIT3P35638 169 aa6.28□□□□□ -1.4
RIF1-207ENST00000454583 SKAP1Q86WV1 359 aa6.28□□□□□ -1.4
RIF1-207ENST00000454583 LRRFIP2Q9Y608 721 aaKnown RBP6.28□□□□□ -1.4
RIF1-207ENST00000454583 WTIPA6NIX2 430 aaPredicted RBP6.28□□□□□ -1.4
RIF1-207ENST00000454583 CTSWP56202 376 aa6.28□□□□□ -1.4
RIF1-207ENST00000454583 EN1Q05925 392 aaPredicted RBP6.28□□□□□ -1.4
RIF1-207ENST00000454583 ERFEQ4G0M1 354 aa6.28□□□□□ -1.4
RIF1-207ENST00000454583 TICAM2Q86XR7 235 aa6.28□□□□□ -1.4
RIF1-207ENST00000454583 KIF2CQ99661 725 aa6.28□□□□□ -1.4
RIF1-207ENST00000454583 MYH4Q9Y623 1939 aa6.28□□□□□ -1.4
RIF1-207ENST00000454583 PARP10Q53GL7 1025 aa6.28□□□□□ -1.4
RIF1-207ENST00000454583 SRCIN1Q9C0H9 1055 aa6.28□□□□□ -1.4
RIF1-207ENST00000454583 A0A087WZG4 1122 aa6.27□□□□□ -1.41
RIF1-207ENST00000454583 IPO8O15397 1037 aaKnown RBP6.27□□□□□ -1.41
RIF1-207ENST00000454583 MYL6BP14649 208 aa6.27□□□□□ -1.41
RIF1-207ENST00000454583 TTC5Q8N0Z6 440 aa6.27□□□□□ -1.41
RIF1-207ENST00000454583 MYD88Q99836 296 aa6.27□□□□□ -1.41
RIF1-207ENST00000454583 PGAP2Q9UHJ9 254 aa6.27□□□□□ -1.41
RIF1-207ENST00000454583 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.27□□□□□ -1.41
RIF1-207ENST00000454583 TCRBV5S4A2TA0A5A2 114 aa6.27□□□□□ -1.41
RIF1-207ENST00000454583 ARID4AP29374 1257 aaPredicted RBP6.27□□□□□ -1.41
RIF1-207ENST00000454583 DEFB132Q7Z7B7 95 aa6.27□□□□□ -1.41
RIF1-207ENST00000454583 SRGNP10124 158 aa6.27□□□□□ -1.41
RIF1-207ENST00000454583 OTUD7AQ8TE49 926 aaPredicted RBP6.27□□□□□ -1.41
RIF1-207ENST00000454583 PPP1R42Q7Z4L9 355 aa6.26□□□□□ -1.41
RIF1-207ENST00000454583 GREM2Q9H772 168 aa6.26□□□□□ -1.41
RIF1-207ENST00000454583 CWC25Q9NXE8 425 aaPredicted RBP6.26□□□□□ -1.41
RIF1-207ENST00000454583 LAS1LQ9Y4W2 734 aaKnown RBP6.26□□□□□ -1.41
RIF1-207ENST00000454583 SALL1Q9NSC2 1324 aa6.26□□□□□ -1.41
RIF1-207ENST00000454583 GCC1Q96CN9 775 aa6.26□□□□□ -1.41
RIF1-207ENST00000454583 CHMP4AQ9BY43 222 aa6.26□□□□□ -1.41
RIF1-207ENST00000454583 C1orf115Q9H7X2 142 aa6.26□□□□□ -1.41
RIF1-207ENST00000454583 WDR81Q562E7 1941 aa6.26□□□□□ -1.41
RIF1-207ENST00000454583 LTBP3Q9NS15 1303 aa6.26□□□□□ -1.41
RIF1-207ENST00000454583 TLR7Q9NYK1 1049 aaKnown RBP6.26□□□□□ -1.41
RIF1-207ENST00000454583 COL11A1P12107 1806 aaPredicted RBP6.25□□□□□ -1.41
RIF1-207ENST00000454583 ATRNL1Q5VV63 1379 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms