RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 FAM9BQ8IZU0 186 aa24.95■■□□□ 1.58
USP40-207ENST00000450940 DNAJC5GQ8N7S2 189 aa24.95■■□□□ 1.58
USP40-207ENST00000450940 PCCAP05165 728 aaPredicted RBP24.94■■□□□ 1.58
USP40-207ENST00000450940 GPC2Q8N158 579 aa24.94■■□□□ 1.58
USP40-207ENST00000450940 SALL2Q9Y467 1007 aaPredicted RBP24.94■■□□□ 1.58
USP40-207ENST00000450940 LARGE2Q8N3Y3 721 aa24.93■■□□□ 1.58
USP40-207ENST00000450940 SUPT20HQ8NEM7 779 aa24.93■■□□□ 1.58
USP40-207ENST00000450940 CWC25Q9NXE8 425 aaPredicted RBP24.93■■□□□ 1.58
USP40-207ENST00000450940 MAP3K2Q9Y2U5 619 aa24.93■■□□□ 1.58
USP40-207ENST00000450940 PI4KAP2A4QPH2 592 aa24.92■■□□□ 1.58
USP40-207ENST00000450940 VAMP4O75379 141 aa24.92■■□□□ 1.58
USP40-207ENST00000450940 SLC4A2P04920 1241 aa24.92■■□□□ 1.58
USP40-207ENST00000450940 HSP90B1P14625 803 aaKnown RBP24.92■■□□□ 1.58
USP40-207ENST00000450940 RTL5Q5HYW3 569 aaPredicted RBP24.92■■□□□ 1.58
USP40-207ENST00000450940 MPNDQ8N594 471 aa24.92■■□□□ 1.58
USP40-207ENST00000450940 PI4KAP1Q8N8J0 262 aa24.92■■□□□ 1.58
USP40-207ENST00000450940 TAF1DQ9H5J8 278 aaPredicted RBP24.92■■□□□ 1.58
USP40-207ENST00000450940 DPP8Q6V1X1 898 aaPredicted RBP24.91■■□□□ 1.58
USP40-207ENST00000450940 G2E3Q7L622 706 aa24.91■■□□□ 1.58
USP40-207ENST00000450940 IGKV5-2P06315 115 aa24.9■■□□□ 1.58
USP40-207ENST00000450940 EIF6P56537 245 aaKnown RBP24.9■■□□□ 1.58
USP40-207ENST00000450940 CELF1Q92879 486 aaKnown RBP24.9■■□□□ 1.58
USP40-207ENST00000450940 SPINK5Q9NQ38 1064 aaPredicted RBP24.9■■□□□ 1.58
USP40-207ENST00000450940 COL4A1P02462 1669 aa24.9■■□□□ 1.58
USP40-207ENST00000450940 PPIP5K2O43314 1243 aa24.89■■□□□ 1.58
USP40-207ENST00000450940 EXOSC9Q06265 439 aaKnown RBP24.89■■□□□ 1.58
USP40-207ENST00000450940 CHADLQ6NUI6 762 aa24.89■■□□□ 1.58
USP40-207ENST00000450940 NIM1KQ8IY84 436 aa24.89■■□□□ 1.58
USP40-207ENST00000450940 HACL1Q9UJ83 578 aa24.89■■□□□ 1.58
USP40-207ENST00000450940 DUOX1Q9NRD9 1551 aa24.88■■□□□ 1.57
USP40-207ENST00000450940 ADAMTSL1Q8N6G6 1762 aa24.88■■□□□ 1.57
USP40-207ENST00000450940 POTEIP0CG38 1075 aa24.88■■□□□ 1.57
USP40-207ENST00000450940 POTEJP0CG39 1038 aa24.88■■□□□ 1.57
USP40-207ENST00000450940 AOC3Q16853 763 aa24.88■■□□□ 1.57
USP40-207ENST00000450940 CDHR2Q9BYE9 1310 aa24.87■■□□□ 1.57
USP40-207ENST00000450940 PDE8AO60658 829 aa24.87■■□□□ 1.57
USP40-207ENST00000450940 KIAA2012Q0VF49 1180 aa24.87■■□□□ 1.57
USP40-207ENST00000450940 ZNF521Q96K83 1311 aa24.86■■□□□ 1.57
USP40-207ENST00000450940 LTBP1Q14766 1721 aa24.86■■□□□ 1.57
USP40-207ENST00000450940 RPS8P62241 208 aaKnown RBP24.86■■□□□ 1.57
USP40-207ENST00000450940 NEXNQ0ZGT2 675 aa24.86■■□□□ 1.57
USP40-207ENST00000450940 FLIIQ13045 1269 aa24.86■■□□□ 1.57
USP40-207ENST00000450940 LDHDQ86WU2 507 aa24.86■■□□□ 1.57
USP40-207ENST00000450940 MYH16Q9H6N6 1097 aa24.86■■□□□ 1.57
USP40-207ENST00000450940 ZNRF3Q9ULT6 936 aa24.86■■□□□ 1.57
USP40-207ENST00000450940 MYH3P11055 1940 aa24.85■■□□□ 1.57
USP40-207ENST00000450940 EPHX2P34913 555 aa24.85■■□□□ 1.57
USP40-207ENST00000450940 HTRA3P83110 453 aa24.85■■□□□ 1.57
USP40-207ENST00000450940 NEURL1BA8MQ27 555 aa24.84■■□□□ 1.57
USP40-207ENST00000450940 CCDC152Q4G0S7 254 aa24.84■■□□□ 1.57
USP40-207ENST00000450940 PNMA8AQ86V59 439 aaPredicted RBP24.84■■□□□ 1.57
USP40-207ENST00000450940 JARID2Q92833 1246 aaPredicted RBP24.84■■□□□ 1.57
USP40-207ENST00000450940 SEC31BQ9NQW1 1179 aa24.83■■□□□ 1.57
USP40-207ENST00000450940 GJA3Q9Y6H8 435 aa24.83■■□□□ 1.57
USP40-207ENST00000450940 H7C1W4 665 aa24.82■■□□□ 1.56
USP40-207ENST00000450940 SCNN1DP51172 638 aa24.82■■□□□ 1.56
USP40-207ENST00000450940 CXCL9Q07325 125 aa24.82■■□□□ 1.56
USP40-207ENST00000450940 CWF19L2Q2TBE0 894 aaKnown RBP24.82■■□□□ 1.56
USP40-207ENST00000450940 KLRG1Q96E93 195 aa24.82■■□□□ 1.56
USP40-207ENST00000450940 NSFL1CQ9UNZ2 370 aaKnown RBP24.81■■□□□ 1.56
USP40-207ENST00000450940 GPSM2P81274 684 aa24.8■■□□□ 1.56
USP40-207ENST00000450940 FKBP5Q13451 457 aaPredicted RBP24.8■■□□□ 1.56
USP40-207ENST00000450940 DNAAF4Q8WXU2 420 aa24.8■■□□□ 1.56
USP40-207ENST00000450940 PODXL2Q9NZ53 605 aa24.8■■□□□ 1.56
USP40-207ENST00000450940 POLLQ9UGP5 575 aa24.8■■□□□ 1.56
USP40-207ENST00000450940 ITGBL1O95965 494 aaPredicted RBP24.79■■□□□ 1.56
USP40-207ENST00000450940 CTSWP56202 376 aa24.79■■□□□ 1.56
USP40-207ENST00000450940 GCKRQ14397 625 aa24.79■■□□□ 1.56
USP40-207ENST00000450940 EAPPQ56P03 285 aaPredicted RBP24.79■■□□□ 1.56
USP40-207ENST00000450940 LINS1Q8NG48 757 aa24.79■■□□□ 1.56
USP40-207ENST00000450940 TTLL11Q8NHH1 800 aa24.79■■□□□ 1.56
USP40-207ENST00000450940 PASKQ96RG2 1323 aa24.79■■□□□ 1.56
USP40-207ENST00000450940 LMOD1P29536 600 aaPredicted RBP24.78■■□□□ 1.56
USP40-207ENST00000450940 EPS15P42566 896 aa24.78■■□□□ 1.56
USP40-207ENST00000450940 WASHC4Q2M389 1173 aa24.78■■□□□ 1.56
USP40-207ENST00000450940 JMYQ8N9B5 988 aa24.78■■□□□ 1.56
USP40-207ENST00000450940 RTL9Q8NET4 1388 aa24.78■■□□□ 1.56
USP40-207ENST00000450940 YDJCA8MPS7 323 aa24.77■■□□□ 1.56
USP40-207ENST00000450940 CIAPIN1Q6FI81 312 aa24.77■■□□□ 1.56
USP40-207ENST00000450940 TBC1D16Q8TBP0 767 aa24.77■■□□□ 1.56
USP40-207ENST00000450940 PLA2G12BQ9BX93 195 aa24.77■■□□□ 1.56
USP40-207ENST00000450940 CASP7P55210 303 aa24.76■■□□□ 1.55
USP40-207ENST00000450940 TNIP1Q15025 636 aa24.76■■□□□ 1.55
USP40-207ENST00000450940 UBE3BQ7Z3V4 1068 aa24.76■■□□□ 1.55
USP40-207ENST00000450940 GPRC5DQ9NZD1 345 aa24.76■■□□□ 1.55
USP40-207ENST00000450940 C6orf229H3BNL8 230 aa24.75■■□□□ 1.55
USP40-207ENST00000450940 USP50Q70EL3 339 aaPredicted RBP24.75■■□□□ 1.55
USP40-207ENST00000450940 CCDC85AQ96PX6 553 aaPredicted RBP24.75■■□□□ 1.55
USP40-207ENST00000450940 EYA3Q99504 573 aa24.75■■□□□ 1.55
USP40-207ENST00000450940 CREBZFQ9NS37 354 aa24.75■■□□□ 1.55
USP40-207ENST00000450940 CLEC11AQ9Y240 323 aa24.75■■□□□ 1.55
USP40-207ENST00000450940 ANKRD18AQ8IVF6 992 aa24.74■■□□□ 1.55
USP40-207ENST00000450940 CCER2I3L3R5 266 aa24.73■■□□□ 1.55
USP40-207ENST00000450940 RAD17O75943 681 aa24.73■■□□□ 1.55
USP40-207ENST00000450940 GMPSP49915 693 aaPredicted RBP24.73■■□□□ 1.55
USP40-207ENST00000450940 CDC5LQ99459 802 aaKnown RBP24.73■■□□□ 1.55
USP40-207ENST00000450940 BEND3Q5T5X7 828 aa24.72■■□□□ 1.55
USP40-207ENST00000450940 CNTROBQ8N137 903 aa24.72■■□□□ 1.55
USP40-207ENST00000450940 GREM2Q9H772 168 aa24.72■■□□□ 1.55
USP40-207ENST00000450940 ADARB2Q9NS39 739 aaKnown RBP24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms