RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 ZNF521Q96K83 1311 aa21.82■■□□□ 1.08
PRPF40A-204ENST00000450303 POTEIP0CG38 1075 aa21.82■■□□□ 1.08
PRPF40A-204ENST00000450303 POTEJP0CG39 1038 aa21.82■■□□□ 1.08
PRPF40A-204ENST00000450303 SP8Q8IXZ3 490 aa21.82■■□□□ 1.08
PRPF40A-204ENST00000450303 METTL22Q9BUU2 404 aaPredicted RBP21.82■■□□□ 1.08
PRPF40A-204ENST00000450303 SPINK5Q9NQ38 1064 aaPredicted RBP21.82■■□□□ 1.08
PRPF40A-204ENST00000450303 CEP350Q5VT06 3117 aa21.81■■□□□ 1.08
PRPF40A-204ENST00000450303 PI4KAP2A4QPH2 592 aa21.81■■□□□ 1.08
PRPF40A-204ENST00000450303 SLC4A2P04920 1241 aa21.81■■□□□ 1.08
PRPF40A-204ENST00000450303 SF3B3Q15393 1217 aaKnown RBP21.81■■□□□ 1.08
PRPF40A-204ENST00000450303 KSR2Q6VAB6 950 aa21.81■■□□□ 1.08
PRPF40A-204ENST00000450303 PI4KAP1Q8N8J0 262 aa21.81■■□□□ 1.08
PRPF40A-204ENST00000450303 ZBTB38Q8NAP3 1195 aaPredicted RBP21.81■■□□□ 1.08
PRPF40A-204ENST00000450303 PPIP5K2O43314 1243 aa21.8■■□□□ 1.08
PRPF40A-204ENST00000450303 EXOSC9Q06265 439 aaKnown RBP21.8■■□□□ 1.08
PRPF40A-204ENST00000450303 AOC3Q16853 763 aa21.8■■□□□ 1.08
PRPF40A-204ENST00000450303 DPP8Q6V1X1 898 aaPredicted RBP21.8■■□□□ 1.08
PRPF40A-204ENST00000450303 MPNDQ8N594 471 aa21.8■■□□□ 1.08
PRPF40A-204ENST00000450303 CCDC191Q8NCU4 936 aa21.8■■□□□ 1.08
PRPF40A-204ENST00000450303 CELF1Q92879 486 aaKnown RBP21.8■■□□□ 1.08
PRPF40A-204ENST00000450303 GJA3Q9Y6H8 435 aa21.8■■□□□ 1.08
PRPF40A-204ENST00000450303 SCN4AP35499 1836 aa21.79■■□□□ 1.08
PRPF40A-204ENST00000450303 E9PSI1 815 aa21.79■■□□□ 1.08
PRPF40A-204ENST00000450303 EIF6P56537 245 aaKnown RBP21.79■■□□□ 1.08
PRPF40A-204ENST00000450303 L3MBTL3Q96JM7 780 aaPredicted RBP21.79■■□□□ 1.08
PRPF40A-204ENST00000450303 MYH16Q9H6N6 1097 aa21.79■■□□□ 1.08
PRPF40A-204ENST00000450303 CWC25Q9NXE8 425 aaPredicted RBP21.79■■□□□ 1.08
PRPF40A-204ENST00000450303 COL4A1P02462 1669 aa21.79■■□□□ 1.08
PRPF40A-204ENST00000450303 IQCA1LA6NCM1 817 aa21.78■■□□□ 1.08
PRPF40A-204ENST00000450303 VAMP4O75379 141 aa21.78■■□□□ 1.08
PRPF40A-204ENST00000450303 PCCAP05165 728 aaPredicted RBP21.78■■□□□ 1.08
PRPF40A-204ENST00000450303 NIM1KQ8IY84 436 aa21.78■■□□□ 1.08
PRPF40A-204ENST00000450303 TAF1DQ9H5J8 278 aaPredicted RBP21.78■■□□□ 1.08
PRPF40A-204ENST00000450303 IGKV5-2P06315 115 aa21.77■■□□□ 1.08
PRPF40A-204ENST00000450303 GPC2Q8N158 579 aa21.77■■□□□ 1.08
PRPF40A-204ENST00000450303 SUPT20HQ8NEM7 779 aa21.77■■□□□ 1.08
PRPF40A-204ENST00000450303 CCDC85AQ96PX6 553 aaPredicted RBP21.77■■□□□ 1.08
PRPF40A-204ENST00000450303 EAPPQ56P03 285 aaPredicted RBP21.76■■□□□ 1.07
PRPF40A-204ENST00000450303 CHADLQ6NUI6 762 aa21.76■■□□□ 1.07
PRPF40A-204ENST00000450303 DNAJC5GQ8N7S2 189 aa21.76■■□□□ 1.07
PRPF40A-204ENST00000450303 RTFDC1Q9BY42 306 aaPredicted RBP21.76■■□□□ 1.07
PRPF40A-204ENST00000450303 SEC31BQ9NQW1 1179 aa21.76■■□□□ 1.07
PRPF40A-204ENST00000450303 HACL1Q9UJ83 578 aa21.76■■□□□ 1.07
PRPF40A-204ENST00000450303 GTF3C3Q9Y5Q9 886 aa21.76■■□□□ 1.07
PRPF40A-204ENST00000450303 SLFN5Q08AF3 891 aa21.75■■□□□ 1.07
PRPF40A-204ENST00000450303 CWF19L2Q2TBE0 894 aaKnown RBP21.75■■□□□ 1.07
PRPF40A-204ENST00000450303 PDE8AO60658 829 aa21.74■■□□□ 1.07
PRPF40A-204ENST00000450303 EPHX2P34913 555 aa21.74■■□□□ 1.07
PRPF40A-204ENST00000450303 NEXNQ0ZGT2 675 aa21.74■■□□□ 1.07
PRPF40A-204ENST00000450303 FLIIQ13045 1269 aa21.74■■□□□ 1.07
PRPF40A-204ENST00000450303 TMC4Q7Z404 712 aa21.74■■□□□ 1.07
PRPF40A-204ENST00000450303 NSFL1CQ9UNZ2 370 aaKnown RBP21.74■■□□□ 1.07
PRPF40A-204ENST00000450303 CLEC11AQ9Y240 323 aa21.74■■□□□ 1.07
PRPF40A-204ENST00000450303 RPS8P62241 208 aaKnown RBP21.73■■□□□ 1.07
PRPF40A-204ENST00000450303 VPS33BQ9H267 617 aa21.73■■□□□ 1.07
PRPF40A-204ENST00000450303 CACNA1FO60840 1977 aa21.72■■□□□ 1.07
PRPF40A-204ENST00000450303 LRRC37AA6NMS7 1700 aa21.72■■□□□ 1.07
PRPF40A-204ENST00000450303 HSP90B1P14625 803 aaKnown RBP21.72■■□□□ 1.07
PRPF40A-204ENST00000450303 GPSM2P81274 684 aa21.72■■□□□ 1.07
PRPF40A-204ENST00000450303 FKBP5Q13451 457 aaPredicted RBP21.72■■□□□ 1.07
PRPF40A-204ENST00000450303 CDCA7LQ96GN5 454 aa21.72■■□□□ 1.07
PRPF40A-204ENST00000450303 DUOX1Q9NRD9 1551 aa21.71■■□□□ 1.07
PRPF40A-204ENST00000450303 NEURL1BA8MQ27 555 aa21.71■■□□□ 1.07
PRPF40A-204ENST00000450303 KIAA2012Q0VF49 1180 aa21.71■■□□□ 1.07
PRPF40A-204ENST00000450303 CCDC152Q4G0S7 254 aa21.71■■□□□ 1.07
PRPF40A-204ENST00000450303 LDHDQ86WU2 507 aa21.71■■□□□ 1.07
PRPF40A-204ENST00000450303 ZNRF3Q9ULT6 936 aa21.71■■□□□ 1.07
PRPF40A-204ENST00000450303 LTBP1Q14766 1721 aa21.7■■□□□ 1.06
PRPF40A-204ENST00000450303 C6orf229H3BNL8 230 aa21.7■■□□□ 1.06
PRPF40A-204ENST00000450303 RIMBP2O15034 1052 aa21.7■■□□□ 1.06
PRPF40A-204ENST00000450303 EPS15P42566 896 aa21.7■■□□□ 1.06
PRPF40A-204ENST00000450303 CXCL9Q07325 125 aa21.7■■□□□ 1.06
PRPF40A-204ENST00000450303 CDHR2Q9BYE9 1310 aa21.7■■□□□ 1.06
PRPF40A-204ENST00000450303 LMOD1P29536 600 aaPredicted RBP21.69■■□□□ 1.06
PRPF40A-204ENST00000450303 SCNN1DP51172 638 aa21.69■■□□□ 1.06
PRPF40A-204ENST00000450303 DNAAF4Q8WXU2 420 aa21.69■■□□□ 1.06
PRPF40A-204ENST00000450303 GPR101Q96P66 508 aaPredicted RBP21.69■■□□□ 1.06
PRPF40A-204ENST00000450303 POLLQ9UGP5 575 aa21.69■■□□□ 1.06
PRPF40A-204ENST00000450303 RAD17O75943 681 aa21.68■■□□□ 1.06
PRPF40A-204ENST00000450303 WASHC4Q2M389 1173 aa21.68■■□□□ 1.06
PRPF40A-204ENST00000450303 UBE3BQ7Z3V4 1068 aa21.68■■□□□ 1.06
PRPF40A-204ENST00000450303 TRMT2AQ8IZ69 625 aaKnown RBP21.68■■□□□ 1.06
PRPF40A-204ENST00000450303 MYH3P11055 1940 aa21.67■■□□□ 1.06
PRPF40A-204ENST00000450303 H7C1W4 665 aa21.67■■□□□ 1.06
PRPF40A-204ENST00000450303 CTSWP56202 376 aa21.67■■□□□ 1.06
PRPF40A-204ENST00000450303 PNMA8AQ86V59 439 aaPredicted RBP21.67■■□□□ 1.06
PRPF40A-204ENST00000450303 KLRG1Q96E93 195 aa21.67■■□□□ 1.06
PRPF40A-204ENST00000450303 YDJCA8MPS7 323 aa21.66■■□□□ 1.06
PRPF40A-204ENST00000450303 F6X3S4 739 aa21.66■■□□□ 1.06
PRPF40A-204ENST00000450303 GCKRQ14397 625 aa21.66■■□□□ 1.06
PRPF40A-204ENST00000450303 MAP1SQ66K74 1059 aaPredicted RBP21.66■■□□□ 1.06
PRPF40A-204ENST00000450303 CIAPIN1Q6FI81 312 aa21.66■■□□□ 1.06
PRPF40A-204ENST00000450303 TTLL11Q8NHH1 800 aa21.66■■□□□ 1.06
PRPF40A-204ENST00000450303 TBC1D16Q8TBP0 767 aa21.66■■□□□ 1.06
PRPF40A-204ENST00000450303 DBNDD1Q9H9R9 158 aa21.66■■□□□ 1.06
PRPF40A-204ENST00000450303 ADAMTSL1Q8N6G6 1762 aa21.66■■□□□ 1.06
PRPF40A-204ENST00000450303 DOK7Q18PE1 504 aa21.65■■□□□ 1.06
PRPF40A-204ENST00000450303 ANKRD18AQ8IVF6 992 aa21.65■■□□□ 1.06
PRPF40A-204ENST00000450303 ANKIB1Q9P2G1 1089 aa21.65■■□□□ 1.06
PRPF40A-204ENST00000450303 SPEF2Q9C093 1822 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms