RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 MPNDQ8N594 471 aa25.33■■□□□ 1.65
VCP-203ENST00000448530 VPS33BQ9H267 617 aa25.33■■□□□ 1.65
VCP-203ENST00000448530 TAF1DQ9H5J8 278 aaPredicted RBP25.33■■□□□ 1.65
VCP-203ENST00000448530 GJA3Q9Y6H8 435 aa25.33■■□□□ 1.65
VCP-203ENST00000448530 TAF1P21675 1872 aa25.32■■□□□ 1.64
VCP-203ENST00000448530 SF3B3Q15393 1217 aaKnown RBP25.32■■□□□ 1.64
VCP-203ENST00000448530 DNAJC5GQ8N7S2 189 aa25.32■■□□□ 1.64
VCP-203ENST00000448530 ZBTB38Q8NAP3 1195 aaPredicted RBP25.32■■□□□ 1.64
VCP-203ENST00000448530 CCDC191Q8NCU4 936 aa25.32■■□□□ 1.64
VCP-203ENST00000448530 LDHDQ86WU2 507 aa25.31■■□□□ 1.64
VCP-203ENST00000448530 FAM9BQ8IZU0 186 aa25.31■■□□□ 1.64
VCP-203ENST00000448530 METTL22Q9BUU2 404 aaPredicted RBP25.31■■□□□ 1.64
VCP-203ENST00000448530 AOC3Q16853 763 aa25.3■■□□□ 1.64
VCP-203ENST00000448530 EAPPQ56P03 285 aaPredicted RBP25.3■■□□□ 1.64
VCP-203ENST00000448530 WDR63Q8IWG1 891 aa25.3■■□□□ 1.64
VCP-203ENST00000448530 CWC25Q9NXE8 425 aaPredicted RBP25.3■■□□□ 1.64
VCP-203ENST00000448530 COL4A5P29400 1685 aa25.29■■□□□ 1.64
VCP-203ENST00000448530 LMOD1P29536 600 aaPredicted RBP25.29■■□□□ 1.64
VCP-203ENST00000448530 EPHX2P34913 555 aa25.29■■□□□ 1.64
VCP-203ENST00000448530 RTFDC1Q9BY42 306 aaPredicted RBP25.29■■□□□ 1.64
VCP-203ENST00000448530 MAP3K2Q9Y2U5 619 aa25.29■■□□□ 1.64
VCP-203ENST00000448530 POTEIP0CG38 1075 aa25.28■■□□□ 1.64
VCP-203ENST00000448530 POTEJP0CG39 1038 aa25.28■■□□□ 1.64
VCP-203ENST00000448530 NEXNQ0ZGT2 675 aa25.28■■□□□ 1.64
VCP-203ENST00000448530 KSR2Q6VAB6 950 aa25.28■■□□□ 1.64
VCP-203ENST00000448530 PNMA8AQ86V59 439 aaPredicted RBP25.28■■□□□ 1.64
VCP-203ENST00000448530 CLEC11AQ9Y240 323 aa25.28■■□□□ 1.64
VCP-203ENST00000448530 PI4KAP2A4QPH2 592 aa25.27■■□□□ 1.64
VCP-203ENST00000448530 PCCAP05165 728 aaPredicted RBP25.27■■□□□ 1.64
VCP-203ENST00000448530 PI4KAP1Q8N8J0 262 aa25.27■■□□□ 1.64
VCP-203ENST00000448530 KLRG1Q96E93 195 aa25.27■■□□□ 1.64
VCP-203ENST00000448530 FANCIQ9NVI1 1328 aa25.27■■□□□ 1.64
VCP-203ENST00000448530 SLC4A2P04920 1241 aa25.26■■□□□ 1.63
VCP-203ENST00000448530 ZNRF3Q9ULT6 936 aa25.26■■□□□ 1.63
VCP-203ENST00000448530 CELF1Q92879 486 aaKnown RBP25.25■■□□□ 1.63
VCP-203ENST00000448530 LRRC37AA6NMS7 1700 aa25.25■■□□□ 1.63
VCP-203ENST00000448530 KIAA2012Q0VF49 1180 aa25.24■■□□□ 1.63
VCP-203ENST00000448530 NSFL1CQ9UNZ2 370 aaKnown RBP25.24■■□□□ 1.63
VCP-203ENST00000448530 PDE8AO60658 829 aa25.23■■□□□ 1.63
VCP-203ENST00000448530 RPS8P62241 208 aaKnown RBP25.23■■□□□ 1.63
VCP-203ENST00000448530 CCDC152Q4G0S7 254 aa25.23■■□□□ 1.63
VCP-203ENST00000448530 CACNA1FO60840 1977 aa25.23■■□□□ 1.63
VCP-203ENST00000448530 JARID2Q92833 1246 aaPredicted RBP25.22■■□□□ 1.63
VCP-203ENST00000448530 G2E3Q7L622 706 aa25.21■■□□□ 1.63
VCP-203ENST00000448530 MYH16Q9H6N6 1097 aa25.21■■□□□ 1.63
VCP-203ENST00000448530 C6orf229H3BNL8 230 aa25.2■■□□□ 1.62
VCP-203ENST00000448530 EXOSC9Q06265 439 aaKnown RBP25.2■■□□□ 1.62
VCP-203ENST00000448530 CXCL9Q07325 125 aa25.2■■□□□ 1.62
VCP-203ENST00000448530 WASHC4Q2M389 1173 aa25.2■■□□□ 1.62
VCP-203ENST00000448530 CDHR2Q9BYE9 1310 aa25.19■■□□□ 1.62
VCP-203ENST00000448530 IGKV5-2P06315 115 aa25.19■■□□□ 1.62
VCP-203ENST00000448530 SCNN1DP51172 638 aa25.19■■□□□ 1.62
VCP-203ENST00000448530 FLIIQ13045 1269 aa25.19■■□□□ 1.62
VCP-203ENST00000448530 FKBP5Q13451 457 aaPredicted RBP25.19■■□□□ 1.62
VCP-203ENST00000448530 TNIP1Q15025 636 aa25.19■■□□□ 1.62
VCP-203ENST00000448530 CIAPIN1Q6FI81 312 aa25.19■■□□□ 1.62
VCP-203ENST00000448530 CREBZFQ9NS37 354 aa25.19■■□□□ 1.62
VCP-203ENST00000448530 DUOX1Q9NRD9 1551 aa25.18■■□□□ 1.62
VCP-203ENST00000448530 ADAMTSL1Q8N6G6 1762 aa25.18■■□□□ 1.62
VCP-203ENST00000448530 VAMP4O75379 141 aa25.18■■□□□ 1.62
VCP-203ENST00000448530 EPS15P42566 896 aa25.18■■□□□ 1.62
VCP-203ENST00000448530 GPSM2P81274 684 aa25.18■■□□□ 1.62
VCP-203ENST00000448530 CCDC85AQ96PX6 553 aaPredicted RBP25.18■■□□□ 1.62
VCP-203ENST00000448530 EYA3Q99504 573 aa25.18■■□□□ 1.62
VCP-203ENST00000448530 SEC31BQ9NQW1 1179 aa25.18■■□□□ 1.62
VCP-203ENST00000448530 RAD17O75943 681 aa25.17■■□□□ 1.62
VCP-203ENST00000448530 CWF19L2Q2TBE0 894 aaKnown RBP25.17■■□□□ 1.62
VCP-203ENST00000448530 JMYQ8N9B5 988 aa25.17■■□□□ 1.62
VCP-203ENST00000448530 NEURL1BA8MQ27 555 aa25.16■■□□□ 1.62
VCP-203ENST00000448530 LTBP1Q14766 1721 aa25.16■■□□□ 1.62
VCP-203ENST00000448530 MAP1SQ66K74 1059 aaPredicted RBP25.16■■□□□ 1.62
VCP-203ENST00000448530 USP50Q70EL3 339 aaPredicted RBP25.16■■□□□ 1.62
VCP-203ENST00000448530 CNTROBQ8N137 903 aa25.16■■□□□ 1.62
VCP-203ENST00000448530 BCL2L13Q9BXK5 485 aa25.16■■□□□ 1.62
VCP-203ENST00000448530 ANKIB1Q9P2G1 1089 aa25.16■■□□□ 1.62
VCP-203ENST00000448530 MYH3P11055 1940 aa25.16■■□□□ 1.62
VCP-203ENST00000448530 PASKQ96RG2 1323 aa25.15■■□□□ 1.62
VCP-203ENST00000448530 RIMBP2O15034 1052 aa25.15■■□□□ 1.62
VCP-203ENST00000448530 CTSWP56202 376 aa25.15■■□□□ 1.62
VCP-203ENST00000448530 ANKRD18AQ8IVF6 992 aa25.15■■□□□ 1.62
VCP-203ENST00000448530 GPRC5DQ9NZD1 345 aa25.15■■□□□ 1.62
VCP-203ENST00000448530 COL4A1P02462 1669 aa25.15■■□□□ 1.62
VCP-203ENST00000448530 ITGBL1O95965 494 aaPredicted RBP25.14■■□□□ 1.62
VCP-203ENST00000448530 GMPSP49915 693 aaPredicted RBP25.14■■□□□ 1.62
VCP-203ENST00000448530 UBE3BQ7Z3V4 1068 aa25.14■■□□□ 1.62
VCP-203ENST00000448530 DNAAF4Q8WXU2 420 aa25.14■■□□□ 1.62
VCP-203ENST00000448530 CDC5LQ99459 802 aaKnown RBP25.14■■□□□ 1.62
VCP-203ENST00000448530 ADARB2Q9NS39 739 aaKnown RBP25.14■■□□□ 1.62
VCP-203ENST00000448530 POLLQ9UGP5 575 aa25.14■■□□□ 1.62
VCP-203ENST00000448530 TBC1D16Q8TBP0 767 aa25.13■■□□□ 1.61
VCP-203ENST00000448530 ZC3H12CQ9C0D7 883 aaKnown RBP25.13■■□□□ 1.61
VCP-203ENST00000448530 SPINK5Q9NQ38 1064 aaPredicted RBP25.13■■□□□ 1.61
VCP-203ENST00000448530 TMEM88BA6NKF7 163 aa25.12■■□□□ 1.61
VCP-203ENST00000448530 G3V3G9 751 aa25.12■■□□□ 1.61
VCP-203ENST00000448530 DCAF8Q5TAQ9 597 aa25.12■■□□□ 1.61
VCP-203ENST00000448530 DBNDD1Q9H9R9 158 aa25.12■■□□□ 1.61
VCP-203ENST00000448530 PODXL2Q9NZ53 605 aa25.12■■□□□ 1.61
VCP-203ENST00000448530 GGA1Q9UJY5 639 aa25.12■■□□□ 1.61
VCP-203ENST00000448530 YDJCA8MPS7 323 aa25.11■■□□□ 1.61
VCP-203ENST00000448530 H7C1W4 665 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 196.6 ms