RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 ZSCAN25Q6NSZ9 544 aa3.43□□□□□ -1.86
LINC00393-201ENST00000443621 INTS5Q6P9B9 1019 aaKnown RBP3.43□□□□□ -1.86
LINC00393-201ENST00000443621 CLEC17AQ6ZS10 378 aa3.43□□□□□ -1.86
LINC00393-201ENST00000443621 TTLL7Q6ZT98 887 aa3.43□□□□□ -1.86
LINC00393-201ENST00000443621 UBE3BQ7Z3V4 1068 aa3.43□□□□□ -1.86
LINC00393-201ENST00000443621 TMC4Q7Z404 712 aa3.43□□□□□ -1.86
LINC00393-201ENST00000443621 DZIP3Q86Y13 1208 aaKnown RBP3.43□□□□□ -1.86
LINC00393-201ENST00000443621 CERS3Q8IU89 383 aa3.43□□□□□ -1.86
LINC00393-201ENST00000443621 TTLL11Q8NHH1 800 aa3.43□□□□□ -1.86
LINC00393-201ENST00000443621 NECTIN2Q92692 538 aa3.43□□□□□ -1.86
LINC00393-201ENST00000443621 INTS4Q96HW7 963 aaKnown RBP3.43□□□□□ -1.86
LINC00393-201ENST00000443621 SLC4A9Q96Q91 983 aa3.43□□□□□ -1.86
LINC00393-201ENST00000443621 CDC5LQ99459 802 aaKnown RBP3.43□□□□□ -1.86
LINC00393-201ENST00000443621 ESYT1Q9BSJ8 1104 aa3.43□□□□□ -1.86
LINC00393-201ENST00000443621 CEP126Q9P2H0 1117 aa3.43□□□□□ -1.86
LINC00393-201ENST00000443621 QSER1Q2KHR3 1735 aa3.43□□□□□ -1.86
LINC00393-201ENST00000443621 ARAP2Q8WZ64 1704 aa3.43□□□□□ -1.86
LINC00393-201ENST00000443621 MYH14Q7Z406 1995 aaKnown RBP3.43□□□□□ -1.86
LINC00393-201ENST00000443621 ZMYM6O95789 1325 aa3.43□□□□□ -1.86
LINC00393-201ENST00000443621 SH3TC1Q8TE82 1336 aa3.43□□□□□ -1.86
LINC00393-201ENST00000443621 ANKRD18BA2A2Z9 1011 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 SEMA3EO15041 775 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 PLEKHG5O94827 1062 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 CAMTA2O94983 1202 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 PDE8BO95263 885 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 ANXA1P04083 346 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 HMGB1P09429 215 aaKnown RBP3.42□□□□□ -1.86
LINC00393-201ENST00000443621 UQCRFS1P1P0C7P4 283 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 PSMA5P28066 241 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 SSFA2P28290 1259 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 HSPA4P34932 840 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 CRKLP46109 303 aaKnown RBP3.42□□□□□ -1.86
LINC00393-201ENST00000443621 CTSWP56202 376 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 OS9Q13438 667 aaPredicted RBP3.42□□□□□ -1.86
LINC00393-201ENST00000443621 UBE4AQ14139 1066 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 KRT32Q14532 448 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 ANKRD1Q15327 319 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 CCDC152Q4G0S7 254 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 TNNI3KQ59H18 835 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 CCDC158Q5M9N0 1113 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 RNF20Q5VTR2 975 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 USPL1Q5W0Q7 1092 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 LMBR1LQ6UX01 489 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 TPTE2Q6XPS3 522 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 KIAA1211Q6ZU35 1233 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 ATG9AQ7Z3C6 839 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 KBTBD3Q8NAB2 608 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 MAP4K1Q92918 833 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 EAF2Q96CJ1 260 aaPredicted RBP3.42□□□□□ -1.86
LINC00393-201ENST00000443621 C8orf37Q96NL8 207 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 HAUS7Q99871 368 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 MTA3Q9BTC8 594 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 RBM42Q9BTD8 480 aaKnown RBP3.42□□□□□ -1.86
LINC00393-201ENST00000443621 UTP14AQ9BVJ6 771 aaKnown RBP3.42□□□□□ -1.86
LINC00393-201ENST00000443621 HELLSQ9NRZ9 838 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 TRMT112Q9UI30 125 aaKnown RBP3.42□□□□□ -1.86
LINC00393-201ENST00000443621 ZBTB1Q9Y2K1 713 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 RTCBQ9Y3I0 505 aaKnown RBP3.42□□□□□ -1.86
LINC00393-201ENST00000443621 RIPOR2Q9Y4F9 1068 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 FPGT-TNNI3KV9GXZ4 949 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 DUOX1Q9NRD9 1551 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 AFF2P51816 1311 aa3.42□□□□□ -1.86
LINC00393-201ENST00000443621 C4BP0C0L5 1744 aa3.41□□□□□ -1.86
LINC00393-201ENST00000443621 KLRG2A4D1S0 409 aaPredicted RBP3.41□□□□□ -1.86
LINC00393-201ENST00000443621 TRIM6-TRIM34B2RNG4 842 aa3.41□□□□□ -1.86
LINC00393-201ENST00000443621 K7ELQ4 463 aaPredicted RBP3.41□□□□□ -1.86
LINC00393-201ENST00000443621 IRS4O14654 1257 aaPredicted RBP3.41□□□□□ -1.86
LINC00393-201ENST00000443621 SEC24BO95487 1268 aa3.41□□□□□ -1.86
LINC00393-201ENST00000443621 NTSR2O95665 410 aa3.41□□□□□ -1.86
LINC00393-201ENST00000443621 PCP11498 1178 aaKnown RBP3.41□□□□□ -1.86
LINC00393-201ENST00000443621 ZKSCAN1P17029 563 aaPredicted RBP3.41□□□□□ -1.86
LINC00393-201ENST00000443621 ARID4AP29374 1257 aaPredicted RBP3.41□□□□□ -1.86
LINC00393-201ENST00000443621 HSPA1LP34931 641 aa3.41□□□□□ -1.86
LINC00393-201ENST00000443621 DDIT3P35638 169 aa3.41□□□□□ -1.86
LINC00393-201ENST00000443621 NUCB2P80303 420 aa3.41□□□□□ -1.86
LINC00393-201ENST00000443621 ITPK1Q13572 414 aa3.41□□□□□ -1.86
LINC00393-201ENST00000443621 CUL4AQ13619 759 aa3.41□□□□□ -1.86
LINC00393-201ENST00000443621 NECTIN1Q15223 517 aa3.41□□□□□ -1.86
LINC00393-201ENST00000443621 UBE3CQ15386 1083 aa3.41□□□□□ -1.86
LINC00393-201ENST00000443621 FAM98CQ17RN3 349 aaKnown RBP3.41□□□□□ -1.86
LINC00393-201ENST00000443621 GRIPAP1Q4V328 841 aa3.41□□□□□ -1.86
LINC00393-201ENST00000443621 EPHA10Q5JZY3 1008 aa3.41□□□□□ -1.86
LINC00393-201ENST00000443621 MEX3CQ5U5Q3 659 aaKnown RBP3.41□□□□□ -1.86
LINC00393-201ENST00000443621 LDHAL6AQ6ZMR3 332 aa3.41□□□□□ -1.86
LINC00393-201ENST00000443621 C15orf52Q6ZUT6 534 aaKnown RBP3.41□□□□□ -1.86
LINC00393-201ENST00000443621 AACSQ86V21 672 aa3.41□□□□□ -1.86
LINC00393-201ENST00000443621 HSCBQ8IWL3 235 aa3.41□□□□□ -1.86
LINC00393-201ENST00000443621 C16orf71Q8IYS4 520 aaPredicted RBP3.41□□□□□ -1.86
LINC00393-201ENST00000443621 VGLL2Q8N8G2 317 aa3.41□□□□□ -1.86
LINC00393-201ENST00000443621 LPIN2Q92539 896 aa3.41□□□□□ -1.86
LINC00393-201ENST00000443621 SYTL4Q96C24 671 aaPredicted RBP3.41□□□□□ -1.86
LINC00393-201ENST00000443621 ZSCAN31Q96LW9 406 aaPredicted RBP3.41□□□□□ -1.86
LINC00393-201ENST00000443621 KIF2CQ99661 725 aa3.41□□□□□ -1.86
LINC00393-201ENST00000443621 DSCC1Q9BVC3 393 aa3.41□□□□□ -1.86
LINC00393-201ENST00000443621 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.41□□□□□ -1.86
LINC00393-201ENST00000443621 ANKRD2Q9GZV1 360 aa3.41□□□□□ -1.86
LINC00393-201ENST00000443621 ANTXR1Q9H6X2 564 aa3.41□□□□□ -1.86
LINC00393-201ENST00000443621 QTRT2Q9H974 415 aaKnown RBP3.41□□□□□ -1.86
LINC00393-201ENST00000443621 BSDC1Q9NW68 430 aaPredicted RBP3.41□□□□□ -1.86
LINC00393-201ENST00000443621 CHMP5Q9NZZ3 219 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms