RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 NTSR2O95665 410 aa5.89□□□□□ -1.47
EDEM3-203ENST00000439962 GRM1Q13255 1194 aa5.89□□□□□ -1.47
EDEM3-203ENST00000439962 EAPPQ56P03 285 aaPredicted RBP5.89□□□□□ -1.47
EDEM3-203ENST00000439962 DDX46Q7L014 1031 aaKnown RBP5.89□□□□□ -1.47
EDEM3-203ENST00000439962 ZNF34Q8IZ26 560 aa5.89□□□□□ -1.47
EDEM3-203ENST00000439962 GCC1Q96CN9 775 aa5.89□□□□□ -1.47
EDEM3-203ENST00000439962 TMX4Q9H1E5 349 aaPredicted RBP5.89□□□□□ -1.47
EDEM3-203ENST00000439962 RRAGCQ9HB90 399 aa5.89□□□□□ -1.47
EDEM3-203ENST00000439962 ANKIB1Q9P2G1 1089 aa5.89□□□□□ -1.47
EDEM3-203ENST00000439962 NFKBIEO00221 500 aa5.89□□□□□ -1.47
EDEM3-203ENST00000439962 IGKV5-2P06315 115 aa5.89□□□□□ -1.47
EDEM3-203ENST00000439962 DOK7Q18PE1 504 aa5.89□□□□□ -1.47
EDEM3-203ENST00000439962 KLHDC4Q8TBB5 520 aa5.89□□□□□ -1.47
EDEM3-203ENST00000439962 PANK1Q8TE04 598 aa5.89□□□□□ -1.47
EDEM3-203ENST00000439962 ZNF594Q96JF6 807 aaPredicted RBP5.89□□□□□ -1.47
EDEM3-203ENST00000439962 NYXQ9GZU5 481 aa5.89□□□□□ -1.47
EDEM3-203ENST00000439962 TAOK3Q9H2K8 898 aa5.89□□□□□ -1.47
EDEM3-203ENST00000439962 ERVV-1B6SEH8 477 aa5.88□□□□□ -1.47
EDEM3-203ENST00000439962 G3V3G9 751 aa5.88□□□□□ -1.47
EDEM3-203ENST00000439962 AOC3Q16853 763 aa5.88□□□□□ -1.47
EDEM3-203ENST00000439962 RBM26Q5T8P6 1007 aaKnown RBP5.88□□□□□ -1.47
EDEM3-203ENST00000439962 DCAF8Q5TAQ9 597 aa5.88□□□□□ -1.47
EDEM3-203ENST00000439962 DBNDD1Q9H9R9 158 aa5.88□□□□□ -1.47
EDEM3-203ENST00000439962 ZBTB40Q9NUA8 1239 aa5.88□□□□□ -1.47
EDEM3-203ENST00000439962 CWC25Q9NXE8 425 aaPredicted RBP5.88□□□□□ -1.47
EDEM3-203ENST00000439962 ABCC4O15439 1325 aa5.88□□□□□ -1.47
EDEM3-203ENST00000439962 TAF1P21675 1872 aa5.88□□□□□ -1.47
EDEM3-203ENST00000439962 SIPA1L3O60292 1781 aaPredicted RBP5.88□□□□□ -1.47
EDEM3-203ENST00000439962 RAD17O75943 681 aa5.88□□□□□ -1.47
EDEM3-203ENST00000439962 KSR2Q6VAB6 950 aa5.88□□□□□ -1.47
EDEM3-203ENST00000439962 C10orf71Q711Q0 1435 aa5.88□□□□□ -1.47
EDEM3-203ENST00000439962 LARGE2Q8N3Y3 721 aa5.88□□□□□ -1.47
EDEM3-203ENST00000439962 DNAAF4Q8WXU2 420 aa5.88□□□□□ -1.47
EDEM3-203ENST00000439962 CNKSR1Q969H4 720 aa5.88□□□□□ -1.47
EDEM3-203ENST00000439962 API5Q9BZZ5 524 aaKnown RBP5.88□□□□□ -1.47
EDEM3-203ENST00000439962 GREM2Q9H772 168 aa5.88□□□□□ -1.47
EDEM3-203ENST00000439962 BABAM1Q9NWV8 329 aa5.88□□□□□ -1.47
EDEM3-203ENST00000439962 NOB1Q9ULX3 412 aaKnown RBP5.88□□□□□ -1.47
EDEM3-203ENST00000439962 PLEKHG2Q9H7P9 1386 aa5.88□□□□□ -1.47
EDEM3-203ENST00000439962 PPEF1O14829 653 aaPredicted RBP5.88□□□□□ -1.47
EDEM3-203ENST00000439962 PPIP5K2O43314 1243 aa5.88□□□□□ -1.47
EDEM3-203ENST00000439962 TAF5LO75529 589 aa5.88□□□□□ -1.47
EDEM3-203ENST00000439962 POTEIP0CG38 1075 aa5.88□□□□□ -1.47
EDEM3-203ENST00000439962 POTEJP0CG39 1038 aa5.88□□□□□ -1.47
EDEM3-203ENST00000439962 RLBP1P12271 317 aa5.88□□□□□ -1.47
EDEM3-203ENST00000439962 TRIM27P14373 513 aa5.88□□□□□ -1.47
EDEM3-203ENST00000439962 NPR1P16066 1061 aa5.88□□□□□ -1.47
EDEM3-203ENST00000439962 TAF7LQ5H9L4 462 aa5.88□□□□□ -1.47
EDEM3-203ENST00000439962 TBC1D32Q96NH3 1257 aa5.88□□□□□ -1.47
EDEM3-203ENST00000439962 METTL22Q9BUU2 404 aaPredicted RBP5.88□□□□□ -1.47
EDEM3-203ENST00000439962 SIL1Q9H173 461 aa5.88□□□□□ -1.47
EDEM3-203ENST00000439962 KCNQ5Q9NR82 932 aa5.88□□□□□ -1.47
EDEM3-203ENST00000439962 CLEC11AQ9Y240 323 aa5.88□□□□□ -1.47
EDEM3-203ENST00000439962 PCDHB15Q9Y5E8 787 aa5.88□□□□□ -1.47
EDEM3-203ENST00000439962 CACNA1SQ13698 1873 aa5.87□□□□□ -1.47
EDEM3-203ENST00000439962 UBR2Q8IWV8 1755 aa5.87□□□□□ -1.47
EDEM3-203ENST00000439962 NBPF7P0C2Y1 421 aaPredicted RBP5.87□□□□□ -1.47
EDEM3-203ENST00000439962 DEKP35659 375 aaKnown RBP5.87□□□□□ -1.47
EDEM3-203ENST00000439962 HSP90AB3PQ58FF7 597 aa5.87□□□□□ -1.47
EDEM3-203ENST00000439962 DPP8Q6V1X1 898 aaPredicted RBP5.87□□□□□ -1.47
EDEM3-203ENST00000439962 RBM17Q96I25 401 aaKnown RBP5.87□□□□□ -1.47
EDEM3-203ENST00000439962 C1orf115Q9H7X2 142 aa5.87□□□□□ -1.47
EDEM3-203ENST00000439962 IQSEC3Q9UPP2 1182 aaPredicted RBP5.87□□□□□ -1.47
EDEM3-203ENST00000439962 PDZRN3Q9UPQ7 1066 aa5.87□□□□□ -1.47
EDEM3-203ENST00000439962 ATP10DQ9P241 1426 aa5.87□□□□□ -1.47
EDEM3-203ENST00000439962 ADCY9O60503 1353 aa5.87□□□□□ -1.47
EDEM3-203ENST00000439962 AFDNP55196 1824 aaKnown RBP5.87□□□□□ -1.47
EDEM3-203ENST00000439962 PTPRCP08575 1304 aa5.87□□□□□ -1.47
EDEM3-203ENST00000439962 NEURL1BA8MQ27 555 aa5.87□□□□□ -1.47
EDEM3-203ENST00000439962 APBB1O00213 710 aa5.87□□□□□ -1.47
EDEM3-203ENST00000439962 ALDH1B1P30837 517 aa5.87□□□□□ -1.47
EDEM3-203ENST00000439962 PARP10Q53GL7 1025 aa5.87□□□□□ -1.47
EDEM3-203ENST00000439962 C16orf71Q8IYS4 520 aaPredicted RBP5.87□□□□□ -1.47
EDEM3-203ENST00000439962 ZBTB12Q9Y330 459 aaPredicted RBP5.87□□□□□ -1.47
EDEM3-203ENST00000439962 LMNB1P20700 586 aa5.86□□□□□ -1.47
EDEM3-203ENST00000439962 NUCB1Q02818 461 aa5.86□□□□□ -1.47
EDEM3-203ENST00000439962 DLK2Q6UY11 383 aa5.86□□□□□ -1.47
EDEM3-203ENST00000439962 MRPL50Q8N5N7 158 aaKnown RBP5.86□□□□□ -1.47
EDEM3-203ENST00000439962 JDP2Q8WYK2 163 aa5.86□□□□□ -1.47
EDEM3-203ENST00000439962 CHMP4AQ9BY43 222 aa5.86□□□□□ -1.47
EDEM3-203ENST00000439962 SLX4Q8IY92 1834 aa5.86□□□□□ -1.47
EDEM3-203ENST00000439962 SHTN1A0MZ66 631 aa5.86□□□□□ -1.47
EDEM3-203ENST00000439962 CCDC93Q567U6 631 aa5.86□□□□□ -1.47
EDEM3-203ENST00000439962 EPHA10Q5JZY3 1008 aa5.86□□□□□ -1.47
EDEM3-203ENST00000439962 LMBR1LQ6UX01 489 aa5.86□□□□□ -1.47
EDEM3-203ENST00000439962 ZBTB38Q8NAP3 1195 aaPredicted RBP5.86□□□□□ -1.47
EDEM3-203ENST00000439962 MPHOSPH8Q99549 860 aa5.86□□□□□ -1.47
EDEM3-203ENST00000439962 ADAMTS7Q9UKP4 1686 aa5.86□□□□□ -1.47
EDEM3-203ENST00000439962 NUP98P52948 1817 aa5.86□□□□□ -1.47
EDEM3-203ENST00000439962 KDM3BQ7LBC6 1761 aa5.86□□□□□ -1.47
EDEM3-203ENST00000439962 F8W031 263 aaPredicted RBP5.85□□□□□ -1.47
EDEM3-203ENST00000439962 HOXB7P09629 217 aa5.85□□□□□ -1.47
EDEM3-203ENST00000439962 PTMSP20962 102 aa5.85□□□□□ -1.47
EDEM3-203ENST00000439962 ITGA6P23229 1130 aa5.85□□□□□ -1.47
EDEM3-203ENST00000439962 KCNJ4P48050 445 aa5.85□□□□□ -1.47
EDEM3-203ENST00000439962 RGS3P49796 1198 aa5.85□□□□□ -1.47
EDEM3-203ENST00000439962 FMR1Q06787 632 aaKnown RBP eCLIP5.85□□□□□ -1.471e-14■■■■■ 51.5
EDEM3-203ENST00000439962 GCKRQ14397 625 aa5.85□□□□□ -1.47
EDEM3-203ENST00000439962 BMP2KLQ5H9B9 411 aa5.85□□□□□ -1.47
EDEM3-203ENST00000439962 MPNDQ8N594 471 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms