RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 SLC10A5Q5PT55 438 aa22.52■■□□□ 1.2
CCDC188-201ENST00000439765 DNAAF4Q8WXU2 420 aa22.52■■□□□ 1.2
CCDC188-201ENST00000439765 SPEF2Q9C093 1822 aa22.5■■□□□ 1.19
CCDC188-201ENST00000439765 NEURL1BA8MQ27 555 aa22.5■■□□□ 1.19
CCDC188-201ENST00000439765 OLFM4Q6UX06 510 aa22.5■■□□□ 1.19
CCDC188-201ENST00000439765 MRPL50Q8N5N7 158 aaKnown RBP22.5■■□□□ 1.19
CCDC188-201ENST00000439765 ZBTB38Q8NAP3 1195 aaPredicted RBP22.5■■□□□ 1.19
CCDC188-201ENST00000439765 JARID2Q92833 1246 aaPredicted RBP22.5■■□□□ 1.19
CCDC188-201ENST00000439765 SMC4Q9NTJ3 1288 aa22.5■■□□□ 1.19
CCDC188-201ENST00000439765 CC2D2BQ6DHV5 1058 aa22.49■■□□□ 1.19
CCDC188-201ENST00000439765 COL4A1P02462 1669 aa22.49■■□□□ 1.19
CCDC188-201ENST00000439765 IRS4O14654 1257 aaPredicted RBP22.48■■□□□ 1.19
CCDC188-201ENST00000439765 DNAJC5GQ8N7S2 189 aa22.48■■□□□ 1.19
CCDC188-201ENST00000439765 CRAMP1Q96RY5 1269 aa22.48■■□□□ 1.19
CCDC188-201ENST00000439765 PCCAP05165 728 aaPredicted RBP22.47■■□□□ 1.19
CCDC188-201ENST00000439765 RBM17Q96I25 401 aaKnown RBP22.47■■□□□ 1.19
CCDC188-201ENST00000439765 PSMD1Q99460 953 aa22.47■■□□□ 1.19
CCDC188-201ENST00000439765 ABCC4O15439 1325 aa22.47■■□□□ 1.19
CCDC188-201ENST00000439765 DDNO94850 711 aaPredicted RBP22.47■■□□□ 1.19
CCDC188-201ENST00000439765 CT47B1P0C2W7 299 aaPredicted RBP22.47■■□□□ 1.19
CCDC188-201ENST00000439765 ALDH1L2Q3SY69 923 aa22.47■■□□□ 1.19
CCDC188-201ENST00000439765 ZNF277Q9NRM2 450 aaPredicted RBP22.47■■□□□ 1.19
CCDC188-201ENST00000439765 LRRC37AA6NMS7 1700 aa22.46■■□□□ 1.19
CCDC188-201ENST00000439765 GRIPAP1Q4V328 841 aa22.46■■□□□ 1.19
CCDC188-201ENST00000439765 SLC4A10Q6U841 1118 aa22.46■■□□□ 1.19
CCDC188-201ENST00000439765 UBE3BQ7Z3V4 1068 aa22.46■■□□□ 1.19
CCDC188-201ENST00000439765 SLC51AQ86UW1 340 aa22.46■■□□□ 1.19
CCDC188-201ENST00000439765 LINS1Q8NG48 757 aa22.46■■□□□ 1.19
CCDC188-201ENST00000439765 IARSP41252 1262 aaKnown RBP22.45■■□□□ 1.18
CCDC188-201ENST00000439765 L3MBTL3Q96JM7 780 aaPredicted RBP22.45■■□□□ 1.18
CCDC188-201ENST00000439765 PTPRCP08575 1304 aa22.44■■□□□ 1.18
CCDC188-201ENST00000439765 PPEF1O14829 653 aaPredicted RBP22.44■■□□□ 1.18
CCDC188-201ENST00000439765 GCKRQ14397 625 aa22.44■■□□□ 1.18
CCDC188-201ENST00000439765 BEND3Q5T5X7 828 aa22.43■■□□□ 1.18
CCDC188-201ENST00000439765 DDX46Q7L014 1031 aaKnown RBP22.43■■□□□ 1.18
CCDC188-201ENST00000439765 COL4A5P29400 1685 aa22.43■■□□□ 1.18
CCDC188-201ENST00000439765 ADAMTSL1Q8N6G6 1762 aa22.43■■□□□ 1.18
CCDC188-201ENST00000439765 CDHR2Q9BYE9 1310 aa22.43■■□□□ 1.18
CCDC188-201ENST00000439765 ZNF541Q9H0D2 1346 aa22.42■■□□□ 1.18
CCDC188-201ENST00000439765 IQCA1LA6NCM1 817 aa22.41■■□□□ 1.18
CCDC188-201ENST00000439765 FZD9O00144 591 aa22.41■■□□□ 1.18
CCDC188-201ENST00000439765 RARSP54136 660 aaKnown RBP22.41■■□□□ 1.18
CCDC188-201ENST00000439765 CCDC85AQ96PX6 553 aaPredicted RBP22.41■■□□□ 1.18
CCDC188-201ENST00000439765 PDE8AO60658 829 aa22.41■■□□□ 1.18
CCDC188-201ENST00000439765 HSP90B1P14625 803 aaKnown RBP22.41■■□□□ 1.18
CCDC188-201ENST00000439765 HTRA3P83110 453 aa22.41■■□□□ 1.18
CCDC188-201ENST00000439765 SF3B3Q15393 1217 aaKnown RBP22.41■■□□□ 1.18
CCDC188-201ENST00000439765 GRAPQ13588 217 aa22.4■■□□□ 1.18
CCDC188-201ENST00000439765 GRAPLQ8TC17 118 aaPredicted RBP22.4■■□□□ 1.18
CCDC188-201ENST00000439765 KLRG1Q96E93 195 aa22.4■■□□□ 1.18
CCDC188-201ENST00000439765 H7C1W4 665 aa22.39■■□□□ 1.17
CCDC188-201ENST00000439765 CENPBP07199 599 aaPredicted RBP22.39■■□□□ 1.17
CCDC188-201ENST00000439765 SRCIN1Q9C0H9 1055 aa22.39■■□□□ 1.17
CCDC188-201ENST00000439765 CTSWP56202 376 aa22.38■■□□□ 1.17
CCDC188-201ENST00000439765 JDP2Q8WYK2 163 aa22.38■■□□□ 1.17
CCDC188-201ENST00000439765 ATP6V0A2Q9Y487 856 aa22.38■■□□□ 1.17
CCDC188-201ENST00000439765 CASP7P55210 303 aa22.37■■□□□ 1.17
CCDC188-201ENST00000439765 CCDC152Q4G0S7 254 aa22.37■■□□□ 1.17
CCDC188-201ENST00000439765 CHADLQ6NUI6 762 aa22.37■■□□□ 1.17
CCDC188-201ENST00000439765 CELF1Q92879 486 aaKnown RBP22.37■■□□□ 1.17
CCDC188-201ENST00000439765 TAF1DQ9H5J8 278 aaPredicted RBP22.37■■□□□ 1.17
CCDC188-201ENST00000439765 NOB1Q9ULX3 412 aaKnown RBP22.37■■□□□ 1.17
CCDC188-201ENST00000439765 KIF16BQ96L93 1317 aa22.37■■□□□ 1.17
CCDC188-201ENST00000439765 GPC2Q8N158 579 aa22.36■■□□□ 1.17
CCDC188-201ENST00000439765 LTBP1Q14766 1721 aa22.36■■□□□ 1.17
CCDC188-201ENST00000439765 GRM8O00222 908 aa22.35■■□□□ 1.17
CCDC188-201ENST00000439765 ALDH1L1O75891 902 aa22.35■■□□□ 1.17
CCDC188-201ENST00000439765 BBOX1O75936 387 aa22.35■■□□□ 1.17
CCDC188-201ENST00000439765 POTEIP0CG38 1075 aa22.35■■□□□ 1.17
CCDC188-201ENST00000439765 POTEJP0CG39 1038 aa22.35■■□□□ 1.17
CCDC188-201ENST00000439765 JMYQ8N9B5 988 aa22.35■■□□□ 1.17
CCDC188-201ENST00000439765 SEC31BQ9NQW1 1179 aa22.35■■□□□ 1.17
CCDC188-201ENST00000439765 DUOX1Q9NRD9 1551 aa22.35■■□□□ 1.17
CCDC188-201ENST00000439765 BRPF1P55201 1214 aaPredicted RBP22.34■■□□□ 1.17
CCDC188-201ENST00000439765 LDHDQ86WU2 507 aa22.34■■□□□ 1.17
CCDC188-201ENST00000439765 TMX4Q9H1E5 349 aaPredicted RBP22.34■■□□□ 1.17
CCDC188-201ENST00000439765 VPS33BQ9H267 617 aa22.34■■□□□ 1.17
CCDC188-201ENST00000439765 C9orf78Q9NZ63 289 aaPredicted RBP22.34■■□□□ 1.17
CCDC188-201ENST00000439765 HACL1Q9UJ83 578 aa22.34■■□□□ 1.17
CCDC188-201ENST00000439765 BCAR3O75815 825 aa22.34■■□□□ 1.17
CCDC188-201ENST00000439765 LARGE2Q8N3Y3 721 aa22.34■■□□□ 1.17
CCDC188-201ENST00000439765 TTLL11Q8NHH1 800 aa22.34■■□□□ 1.17
CCDC188-201ENST00000439765 RTFDC1Q9BY42 306 aaPredicted RBP22.34■■□□□ 1.17
CCDC188-201ENST00000439765 GREM2Q9H772 168 aa22.34■■□□□ 1.17
CCDC188-201ENST00000439765 EIF6P56537 245 aaKnown RBP22.33■■□□□ 1.16
CCDC188-201ENST00000439765 SP8Q8IXZ3 490 aa22.33■■□□□ 1.16
CCDC188-201ENST00000439765 A0A1B0GUL6 1792 aa22.32■■□□□ 1.16
CCDC188-201ENST00000439765 PCNTO95613 3336 aa22.32■■□□□ 1.16
CCDC188-201ENST00000439765 PLA2G12BQ9BX93 195 aa22.32■■□□□ 1.16
CCDC188-201ENST00000439765 EPHX2P34913 555 aa22.31■■□□□ 1.16
CCDC188-201ENST00000439765 FAM161AQ3B820 660 aa22.31■■□□□ 1.16
CCDC188-201ENST00000439765 TMC4Q7Z404 712 aa22.31■■□□□ 1.16
CCDC188-201ENST00000439765 SUPT20HQ8NEM7 779 aa22.31■■□□□ 1.16
CCDC188-201ENST00000439765 FRAT1Q92837 279 aaPredicted RBP22.31■■□□□ 1.16
CCDC188-201ENST00000439765 API5Q9BZZ5 524 aaKnown RBP22.31■■□□□ 1.16
CCDC188-201ENST00000439765 RTL9Q8NET4 1388 aa22.31■■□□□ 1.16
CCDC188-201ENST00000439765 PPIP5K2O43314 1243 aa22.3■■□□□ 1.16
CCDC188-201ENST00000439765 NBPF7P0C2Y1 421 aaPredicted RBP22.3■■□□□ 1.16
CCDC188-201ENST00000439765 RPS8P62241 208 aaKnown RBP22.3■■□□□ 1.16
CCDC188-201ENST00000439765 TRPM7Q96QT4 1865 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms