RNA–Protein interactions for RNA: ENST00000438265.5

RPE-211, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 3

Gene RPE, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-211ENST00000438265 TMEM88BA6NKF7 163 aa10.72□□□□□ -0.69
RPE-211ENST00000438265 ATP5J2-PTCD1G3V325 749 aa10.72□□□□□ -0.69
RPE-211ENST00000438265 ZNF853P0CG23 659 aa10.72□□□□□ -0.69
RPE-211ENST00000438265 HIRAP54198 1017 aaPredicted RBP10.72□□□□□ -0.69
RPE-211ENST00000438265 CXCL9Q07325 125 aa10.72□□□□□ -0.69
RPE-211ENST00000438265 TCIRG1Q13488 830 aa10.72□□□□□ -0.69
RPE-211ENST00000438265 CST9Q5W186 159 aa10.72□□□□□ -0.69
RPE-211ENST00000438265 FAM9BQ8IZU0 186 aa10.72□□□□□ -0.69
RPE-211ENST00000438265 RBM17Q96I25 401 aaKnown RBP10.72□□□□□ -0.69
RPE-211ENST00000438265 CHMP4AQ9BY43 222 aa10.72□□□□□ -0.69
RPE-211ENST00000438265 DDX21Q9NR30 783 aaKnown RBP eCLIP10.72□□□□□ -0.69
RPE-211ENST00000438265 ATP6V0A2Q9Y487 856 aa10.72□□□□□ -0.69
RPE-211ENST00000438265 PPIP5K2O43314 1243 aa10.71□□□□□ -0.69
RPE-211ENST00000438265 CACNA1FO60840 1977 aa10.71□□□□□ -0.69
RPE-211ENST00000438265 EGFRP00533 1210 aa10.71□□□□□ -0.69
RPE-211ENST00000438265 PARP10Q53GL7 1025 aa10.71□□□□□ -0.69
RPE-211ENST00000438265 RTL5Q5HYW3 569 aaPredicted RBP10.71□□□□□ -0.69
RPE-211ENST00000438265 PPP1R42Q7Z4L9 355 aa10.71□□□□□ -0.69
RPE-211ENST00000438265 WDR63Q8IWG1 891 aa10.71□□□□□ -0.69
RPE-211ENST00000438265 WWC1Q8IX03 1113 aa10.71□□□□□ -0.69
RPE-211ENST00000438265 JARID2Q92833 1246 aaPredicted RBP10.71□□□□□ -0.69
RPE-211ENST00000438265 CELF1Q92879 486 aaKnown RBP10.71□□□□□ -0.69
RPE-211ENST00000438265 ISCA1Q9BUE6 129 aa10.71□□□□□ -0.69
RPE-211ENST00000438265 RTFDC1Q9BY42 306 aaPredicted RBP10.71□□□□□ -0.69
RPE-211ENST00000438265 KCNQ5Q9NR82 932 aa10.71□□□□□ -0.69
RPE-211ENST00000438265 MBIPQ9NS73 344 aa10.71□□□□□ -0.69
RPE-211ENST00000438265 TNRC18O15417 2968 aaPredicted RBP10.71□□□□□ -0.7
RPE-211ENST00000438265 RASSF10A6NK89 507 aa10.7□□□□□ -0.7
RPE-211ENST00000438265 TRPM4Q8TD43 1214 aa10.7□□□□□ -0.7
RPE-211ENST00000438265 FAM89AQ96GI7 184 aa10.7□□□□□ -0.7
RPE-211ENST00000438265 NLRP3Q96P20 1036 aa10.7□□□□□ -0.7
RPE-211ENST00000438265 PHAXQ9H814 394 aaKnown RBP10.7□□□□□ -0.7
RPE-211ENST00000438265 AKAP11Q9UKA4 1901 aa10.7□□□□□ -0.7
RPE-211ENST00000438265 WTIPA6NIX2 430 aaPredicted RBP10.69□□□□□ -0.7
RPE-211ENST00000438265 RAD17O75943 681 aa10.69□□□□□ -0.7
RPE-211ENST00000438265 GMPSP49915 693 aaPredicted RBP10.69□□□□□ -0.7
RPE-211ENST00000438265 EIF6P56537 245 aaKnown RBP10.69□□□□□ -0.7
RPE-211ENST00000438265 CC2D2BQ6DHV5 1058 aa10.69□□□□□ -0.7
RPE-211ENST00000438265 JDP2Q8WYK2 163 aa10.69□□□□□ -0.7
RPE-211ENST00000438265 WBP1LQ9NX94 342 aa10.69□□□□□ -0.7
RPE-211ENST00000438265 GPRC5DQ9NZD1 345 aa10.69□□□□□ -0.7
RPE-211ENST00000438265 TRMT112Q9UI30 125 aaKnown RBP10.69□□□□□ -0.7
RPE-211ENST00000438265 RTL9Q8NET4 1388 aa10.68□□□□□ -0.7
RPE-211ENST00000438265 SH3TC1Q8TE82 1336 aa10.68□□□□□ -0.7
RPE-211ENST00000438265 ZNF521Q96K83 1311 aa10.68□□□□□ -0.7
RPE-211ENST00000438265 WDR33Q9C0J8 1336 aaKnown RBP10.68□□□□□ -0.7
RPE-211ENST00000438265 HSPA8P11142 646 aaKnown RBP10.68□□□□□ -0.7
RPE-211ENST00000438265 LBX1P52954 281 aa10.68□□□□□ -0.7
RPE-211ENST00000438265 KIAA2012Q0VF49 1180 aa10.68□□□□□ -0.7
RPE-211ENST00000438265 GRAPQ13588 217 aa10.68□□□□□ -0.7
RPE-211ENST00000438265 HDGFL1Q5TGJ6 251 aa10.68□□□□□ -0.7
RPE-211ENST00000438265 DUSP27Q5VZP5 1158 aa10.68□□□□□ -0.7
RPE-211ENST00000438265 CYP4F22Q6NT55 531 aa10.68□□□□□ -0.7
RPE-211ENST00000438265 SP8Q8IXZ3 490 aa10.68□□□□□ -0.7
RPE-211ENST00000438265 NIM1KQ8IY84 436 aa10.68□□□□□ -0.7
RPE-211ENST00000438265 TSPYL6Q8N831 410 aa10.68□□□□□ -0.7
RPE-211ENST00000438265 GRAPLQ8TC17 118 aaPredicted RBP10.68□□□□□ -0.7
RPE-211ENST00000438265 ZIC5Q96T25 663 aa10.68□□□□□ -0.7
RPE-211ENST00000438265 GLIS2Q9BZE0 524 aaPredicted RBP10.68□□□□□ -0.7
RPE-211ENST00000438265 POLLQ9UGP5 575 aa10.68□□□□□ -0.7
RPE-211ENST00000438265 ZBTB12Q9Y330 459 aaPredicted RBP10.68□□□□□ -0.7
RPE-211ENST00000438265 ELL2O00472 640 aaPredicted RBP10.67□□□□□ -0.7
RPE-211ENST00000438265 AOC2O75106 756 aa10.67□□□□□ -0.7
RPE-211ENST00000438265 GPSM2P81274 684 aa10.67□□□□□ -0.7
RPE-211ENST00000438265 DEFB115Q30KQ5 88 aa10.67□□□□□ -0.7
RPE-211ENST00000438265 PNMA8AQ86V59 439 aaPredicted RBP10.67□□□□□ -0.7
RPE-211ENST00000438265 MIER1Q8N108 512 aa10.67□□□□□ -0.7
RPE-211ENST00000438265 C8orf58Q8NAV2 365 aa10.67□□□□□ -0.7
RPE-211ENST00000438265 PLBD2Q8NHP8 589 aa10.67□□□□□ -0.7
RPE-211ENST00000438265 SEC31BQ9NQW1 1179 aa10.67□□□□□ -0.7
RPE-211ENST00000438265 TSKSQ9UJT2 592 aa10.67□□□□□ -0.7
RPE-211ENST00000438265 ZNRF3Q9ULT6 936 aa10.67□□□□□ -0.7
RPE-211ENST00000438265 ASTN2O75129 1339 aaPredicted RBP10.66□□□□□ -0.7
RPE-211ENST00000438265 DPP8Q6V1X1 898 aaPredicted RBP10.66□□□□□ -0.7
RPE-211ENST00000438265 ANKRD13DQ6ZTN6 518 aa10.66□□□□□ -0.7
RPE-211ENST00000438265 MPNDQ8N594 471 aa10.66□□□□□ -0.7
RPE-211ENST00000438265 MYH16Q9H6N6 1097 aa10.66□□□□□ -0.7
RPE-211ENST00000438265 DBNDD1Q9H9R9 158 aa10.66□□□□□ -0.7
RPE-211ENST00000438265 PSMD14O00487 310 aa10.65□□□□□ -0.7
RPE-211ENST00000438265 RIMBP2O15034 1052 aa10.65□□□□□ -0.7
RPE-211ENST00000438265 BBOX1O75936 387 aa10.65□□□□□ -0.7
RPE-211ENST00000438265 SF3B3Q15393 1217 aaKnown RBP10.65□□□□□ -0.7
RPE-211ENST00000438265 CIAPIN1Q6FI81 312 aa10.65□□□□□ -0.7
RPE-211ENST00000438265 USP50Q70EL3 339 aaPredicted RBP10.65□□□□□ -0.7
RPE-211ENST00000438265 SAMD7Q7Z3H4 446 aa10.65□□□□□ -0.7
RPE-211ENST00000438265 CAPNS2Q96L46 248 aa10.65□□□□□ -0.7
RPE-211ENST00000438265 ADARB2Q9NS39 739 aaKnown RBP10.65□□□□□ -0.7
RPE-211ENST00000438265 PGAP2Q9UHJ9 254 aa10.65□□□□□ -0.7
RPE-211ENST00000438265 ABT1Q9ULW3 272 aaKnown RBP10.65□□□□□ -0.7
RPE-211ENST00000438265 ECM29Q5VYK3 1845 aa10.65□□□□□ -0.71
RPE-211ENST00000438265 LMOD1P29536 600 aaPredicted RBP10.64□□□□□ -0.71
RPE-211ENST00000438265 GRM1Q13255 1194 aa10.64□□□□□ -0.71
RPE-211ENST00000438265 DOK7Q18PE1 504 aa10.64□□□□□ -0.71
RPE-211ENST00000438265 HSP90AB3PQ58FF7 597 aa10.64□□□□□ -0.71
RPE-211ENST00000438265 DDX46Q7L014 1031 aaKnown RBP10.64□□□□□ -0.71
RPE-211ENST00000438265 CCDC85AQ96PX6 553 aaPredicted RBP10.64□□□□□ -0.71
RPE-211ENST00000438265 PRDM10Q9NQV6 1147 aa10.64□□□□□ -0.71
RPE-211ENST00000438265 TLL2Q9Y6L7 1015 aa10.64□□□□□ -0.71
RPE-211ENST00000438265 FANCIQ9NVI1 1328 aa10.63□□□□□ -0.71
RPE-211ENST00000438265 E9PSI1 815 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms