RNA–Protein interactions for RNA: ENST00000436282.1

TOP3B-206, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 2,890 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-206ENST00000436282 NRBP1Q9UHY1 535 aa17.66■□□□□ 0.42
TOP3B-206ENST00000436282 DDX54Q8TDD1 881 aaKnown RBP17.65■□□□□ 0.42
TOP3B-206ENST00000436282 SPATA32Q96LK8 384 aa17.65■□□□□ 0.42
TOP3B-206ENST00000436282 MTX1Q13505 466 aa17.65■□□□□ 0.42
TOP3B-206ENST00000436282 MAP4K1Q92918 833 aa17.65■□□□□ 0.42
TOP3B-206ENST00000436282 CGNQ9P2M7 1197 aaKnown RBP17.65■□□□□ 0.42
TOP3B-206ENST00000436282 CTNNA3Q9UI47 895 aa17.65■□□□□ 0.42
TOP3B-206ENST00000436282 PA2G4Q9UQ80 394 aaKnown RBP17.65■□□□□ 0.42
TOP3B-206ENST00000436282 KCNJ4P48050 445 aa17.64■□□□□ 0.41
TOP3B-206ENST00000436282 ANKRD1Q15327 319 aa17.64■□□□□ 0.41
TOP3B-206ENST00000436282 LEO1Q8WVC0 666 aaPredicted RBP17.64■□□□□ 0.41
TOP3B-206ENST00000436282 RAPGEF4Q8WZA2 1011 aa17.64■□□□□ 0.41
TOP3B-206ENST00000436282 HIP1O00291 1037 aa17.63■□□□□ 0.41
TOP3B-206ENST00000436282 CCDC112Q8NEF3 446 aa17.63■□□□□ 0.41
TOP3B-206ENST00000436282 CABLES1Q8TDN4 633 aa17.63■□□□□ 0.41
TOP3B-206ENST00000436282 SLC27A2O14975 620 aa17.63■□□□□ 0.41
TOP3B-206ENST00000436282 IFIT2P09913 472 aaKnown RBP17.63■□□□□ 0.41
TOP3B-206ENST00000436282 CSB-PGBD3P0DP91 1061 aa17.63■□□□□ 0.41
TOP3B-206ENST00000436282 CDC25BP30305 580 aa17.63■□□□□ 0.41
TOP3B-206ENST00000436282 ZNF165P49910 485 aa17.63■□□□□ 0.41
TOP3B-206ENST00000436282 ERC1Q8IUD2 1116 aa17.63■□□□□ 0.41
TOP3B-206ENST00000436282 C19orf44Q9H6X5 657 aa17.63■□□□□ 0.41
TOP3B-206ENST00000436282 KSR2Q6VAB6 950 aa17.62■□□□□ 0.41
TOP3B-206ENST00000436282 ALDH8A1Q9H2A2 487 aaPredicted RBP17.62■□□□□ 0.41
TOP3B-206ENST00000436282 CLIP2Q9UDT6 1046 aa17.62■□□□□ 0.41
TOP3B-206ENST00000436282 CAVIN2O95810 425 aa17.62■□□□□ 0.41
TOP3B-206ENST00000436282 BLOC1S2Q6QNY1 142 aa17.62■□□□□ 0.41
TOP3B-206ENST00000436282 SNRKQ9NRH2 765 aa17.62■□□□□ 0.41
TOP3B-206ENST00000436282 TFIP11Q9UBB9 837 aaKnown RBP17.62■□□□□ 0.41
TOP3B-206ENST00000436282 ERBB3P21860 1342 aa17.62■□□□□ 0.41
TOP3B-206ENST00000436282 MYL6BP14649 208 aa17.62■□□□□ 0.41
TOP3B-206ENST00000436282 TPD52L1Q16890 204 aaPredicted RBP17.62■□□□□ 0.41
TOP3B-206ENST00000436282 CACTINQ8WUQ7 758 aaKnown RBP17.62■□□□□ 0.41
TOP3B-206ENST00000436282 MED1Q15648 1581 aaPredicted RBP17.61■□□□□ 0.41
TOP3B-206ENST00000436282 ATF3P18847 181 aa17.61■□□□□ 0.41
TOP3B-206ENST00000436282 LARP1Q6PKG0 1096 aaKnown RBP17.61■□□□□ 0.41
TOP3B-206ENST00000436282 NR1I2O75469 434 aa17.61■□□□□ 0.41
TOP3B-206ENST00000436282 GABPB1Q06547 395 aaPredicted RBP17.61■□□□□ 0.41
TOP3B-206ENST00000436282 NMIQ13287 307 aaPredicted RBP17.61■□□□□ 0.41
TOP3B-206ENST00000436282 RNF20Q5VTR2 975 aa17.61■□□□□ 0.41
TOP3B-206ENST00000436282 FAM227BQ96M60 508 aa17.61■□□□□ 0.41
TOP3B-206ENST00000436282 DNAJC25Q9H1X3 360 aa17.61■□□□□ 0.41
TOP3B-206ENST00000436282 DDX41Q9UJV9 622 aaKnown RBP17.61■□□□□ 0.41
TOP3B-206ENST00000436282 RPS6KB1P23443 525 aa17.6■□□□□ 0.41
TOP3B-206ENST00000436282 CHRNA2Q15822 529 aa17.6■□□□□ 0.41
TOP3B-206ENST00000436282 BICD2Q8TD16 824 aa17.6■□□□□ 0.41
TOP3B-206ENST00000436282 KDM3BQ7LBC6 1761 aa17.59■□□□□ 0.41
TOP3B-206ENST00000436282 COL9A3Q14050 684 aaPredicted RBP17.59■□□□□ 0.41
TOP3B-206ENST00000436282 CCDC144BQ3MJ40 725 aa17.59■□□□□ 0.41
TOP3B-206ENST00000436282 AACSQ86V21 672 aa17.59■□□□□ 0.41
TOP3B-206ENST00000436282 CCDC144CPQ8IYA2 1237 aa17.59■□□□□ 0.41
TOP3B-206ENST00000436282 NFATC2IPQ8NCF5 419 aa17.59■□□□□ 0.41
TOP3B-206ENST00000436282 PGBD1Q96JS3 809 aa17.59■□□□□ 0.41
TOP3B-206ENST00000436282 PIP4K2AP48426 406 aaPredicted RBP17.59■□□□□ 0.41
TOP3B-206ENST00000436282 TOB2Q14106 344 aaPredicted RBP17.59■□□□□ 0.41
TOP3B-206ENST00000436282 SARM1Q6SZW1 724 aa17.59■□□□□ 0.41
TOP3B-206ENST00000436282 RIC3Q7Z5B4 369 aa17.59■□□□□ 0.41
TOP3B-206ENST00000436282 C1orf167Q5SNV9 1468 aa17.59■□□□□ 0.41
TOP3B-206ENST00000436282 ALDH1L1O75891 902 aa17.58■□□□□ 0.41
TOP3B-206ENST00000436282 CEP135Q66GS9 1140 aa17.58■□□□□ 0.41
TOP3B-206ENST00000436282 PODXL2Q9NZ53 605 aa17.58■□□□□ 0.41
TOP3B-206ENST00000436282 ZNF142P52746 1687 aaPredicted RBP17.58■□□□□ 0.4
TOP3B-206ENST00000436282 NEMFO60524 1076 aa17.58■□□□□ 0.4
TOP3B-206ENST00000436282 ZNF790Q6PG37 636 aa17.58■□□□□ 0.4
TOP3B-206ENST00000436282 MORC2Q9Y6X9 1032 aaPredicted RBP17.58■□□□□ 0.4
TOP3B-206ENST00000436282 DDX58O95786 925 aaKnown RBP17.58■□□□□ 0.4
TOP3B-206ENST00000436282 TATP17735 454 aaPredicted RBP17.58■□□□□ 0.4
TOP3B-206ENST00000436282 SUCLG2Q96I99 432 aa17.58■□□□□ 0.4
TOP3B-206ENST00000436282 TCEANC2Q96MN5 208 aa17.58■□□□□ 0.4
TOP3B-206ENST00000436282 DDX21Q9NR30 783 aaKnown RBP eCLIP17.58■□□□□ 0.4
TOP3B-206ENST00000436282 NCAPD2Q15021 1401 aa17.57■□□□□ 0.4
TOP3B-206ENST00000436282 SLIT3O75094 1523 aa17.57■□□□□ 0.4
TOP3B-206ENST00000436282 GRM8O00222 908 aa17.57■□□□□ 0.4
TOP3B-206ENST00000436282 RBM6P78332 1123 aaKnown RBP17.57■□□□□ 0.4
TOP3B-206ENST00000436282 NAA30Q147X3 362 aaPredicted RBP17.57■□□□□ 0.4
TOP3B-206ENST00000436282 LRRC8AQ8IWT6 810 aa17.57■□□□□ 0.4
TOP3B-206ENST00000436282 SIL1Q9H173 461 aa17.57■□□□□ 0.4
TOP3B-206ENST00000436282 IGSF3O75054 1194 aa17.57■□□□□ 0.4
TOP3B-206ENST00000436282 TAF3Q5VWG9 929 aa17.57■□□□□ 0.4
TOP3B-206ENST00000436282 ZNF771Q7L3S4 317 aaPredicted RBP17.57■□□□□ 0.4
TOP3B-206ENST00000436282 LINS1Q8NG48 757 aa17.57■□□□□ 0.4
TOP3B-206ENST00000436282 MRFAP1L1Q96HT8 127 aa17.57■□□□□ 0.4
TOP3B-206ENST00000436282 HMG20BQ9P0W2 317 aa17.57■□□□□ 0.4
TOP3B-206ENST00000436282 MED23Q9ULK4 1368 aa17.56■□□□□ 0.4
TOP3B-206ENST00000436282 A0A0D9SFI3 127 aa17.56■□□□□ 0.4
TOP3B-206ENST00000436282 GOLGA6L19H0YKK7 550 aa17.56■□□□□ 0.4
TOP3B-206ENST00000436282 IQCB1Q15051 598 aa17.56■□□□□ 0.4
TOP3B-206ENST00000436282 KIF18AQ8NI77 898 aa17.56■□□□□ 0.4
TOP3B-206ENST00000436282 BICC1Q9H694 974 aaKnown RBP17.56■□□□□ 0.4
TOP3B-206ENST00000436282 HDAC5Q9UQL6 1122 aa17.56■□□□□ 0.4
TOP3B-206ENST00000436282 JCADQ9P266 1359 aa17.56■□□□□ 0.4
TOP3B-206ENST00000436282 RESTQ13127 1097 aa17.56■□□□□ 0.4
TOP3B-206ENST00000436282 TSGA10IPQ3SY00 556 aa17.56■□□□□ 0.4
TOP3B-206ENST00000436282 LMO7Q8WWI1 1683 aa17.56■□□□□ 0.4
TOP3B-206ENST00000436282 STK3Q13188 491 aa17.55■□□□□ 0.4
TOP3B-206ENST00000436282 PDIA6Q15084 440 aa17.55■□□□□ 0.4
TOP3B-206ENST00000436282 KLHDC4Q8TBB5 520 aa17.55■□□□□ 0.4
TOP3B-206ENST00000436282 XAGE3Q8WTP9 111 aa17.55■□□□□ 0.4
TOP3B-206ENST00000436282 SLC52A2Q9HAB3 445 aa17.55■□□□□ 0.4
TOP3B-206ENST00000436282 ZNF397Q8NF99 534 aaPredicted RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms