RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 SYT17Q9BSW7 474 aa20.67■□□□□ 0.9
CTDSPL-204ENST00000435525 PIM2Q9P1W9 311 aa20.67■□□□□ 0.9
CTDSPL-204ENST00000435525 LRRFIP2Q9Y608 721 aaKnown RBP20.67■□□□□ 0.9
CTDSPL-204ENST00000435525 LRP5O75197 1615 aa20.67■□□□□ 0.9
CTDSPL-204ENST00000435525 A0A0G2JLW4 131 aa20.66■□□□□ 0.9
CTDSPL-204ENST00000435525 DPEP1P16444 411 aa20.66■□□□□ 0.9
CTDSPL-204ENST00000435525 IFIT5Q13325 482 aaKnown RBP20.66■□□□□ 0.9
CTDSPL-204ENST00000435525 TAF7LQ5H9L4 462 aa20.66■□□□□ 0.9
CTDSPL-204ENST00000435525 TTLL11Q8NHH1 800 aa20.66■□□□□ 0.9
CTDSPL-204ENST00000435525 CRAMP1Q96RY5 1269 aa20.66■□□□□ 0.9
CTDSPL-204ENST00000435525 BICC1Q9H694 974 aaKnown RBP20.66■□□□□ 0.9
CTDSPL-204ENST00000435525 ANKRD18BA2A2Z9 1011 aa20.65■□□□□ 0.9
CTDSPL-204ENST00000435525 CSF1RP07333 972 aa20.65■□□□□ 0.9
CTDSPL-204ENST00000435525 CHRNA5P30532 468 aa20.65■□□□□ 0.9
CTDSPL-204ENST00000435525 HOXA10P31260 410 aaPredicted RBP20.65■□□□□ 0.9
CTDSPL-204ENST00000435525 FOXO4P98177 505 aa20.65■□□□□ 0.9
CTDSPL-204ENST00000435525 TTLL6Q8N841 843 aa20.65■□□□□ 0.9
CTDSPL-204ENST00000435525 CRBNQ96SW2 442 aa20.65■□□□□ 0.9
CTDSPL-204ENST00000435525 RTL9Q8NET4 1388 aa20.64■□□□□ 0.89
CTDSPL-204ENST00000435525 TMC4Q7Z404 712 aa20.64■□□□□ 0.89
CTDSPL-204ENST00000435525 ZBTB40Q9NUA8 1239 aa20.64■□□□□ 0.89
CTDSPL-204ENST00000435525 BBOX1O75936 387 aa20.63■□□□□ 0.89
CTDSPL-204ENST00000435525 IGHMBP2P38935 993 aaKnown RBP20.63■□□□□ 0.89
CTDSPL-204ENST00000435525 GRAPQ13588 217 aa20.63■□□□□ 0.89
CTDSPL-204ENST00000435525 RABL6Q3YEC7 729 aaPredicted RBP20.63■□□□□ 0.89
CTDSPL-204ENST00000435525 DALRD3Q5D0E6 543 aaKnown RBP20.63■□□□□ 0.89
CTDSPL-204ENST00000435525 ANKRD18AQ8IVF6 992 aa20.63■□□□□ 0.89
CTDSPL-204ENST00000435525 GRAPLQ8TC17 118 aaPredicted RBP20.63■□□□□ 0.89
CTDSPL-204ENST00000435525 CCDC85AQ96PX6 553 aaPredicted RBP20.63■□□□□ 0.89
CTDSPL-204ENST00000435525 N4BP2Q86UW6 1770 aaPredicted RBP20.62■□□□□ 0.89
CTDSPL-204ENST00000435525 DCAF8L1A6NGE4 600 aa20.62■□□□□ 0.89
CTDSPL-204ENST00000435525 HMMRO75330 724 aa20.62■□□□□ 0.89
CTDSPL-204ENST00000435525 ITGA6P23229 1130 aa20.62■□□□□ 0.89
CTDSPL-204ENST00000435525 C3orf67Q6ZVT6 689 aa20.62■□□□□ 0.89
CTDSPL-204ENST00000435525 GREM2Q9H772 168 aa20.62■□□□□ 0.89
CTDSPL-204ENST00000435525 FAM161AQ3B820 660 aa20.61■□□□□ 0.89
CTDSPL-204ENST00000435525 EPHA10Q5JZY3 1008 aa20.61■□□□□ 0.89
CTDSPL-204ENST00000435525 RPAP2Q8IXW5 612 aaPredicted RBP20.61■□□□□ 0.89
CTDSPL-204ENST00000435525 ANKRD44Q8N8A2 993 aa20.61■□□□□ 0.89
CTDSPL-204ENST00000435525 NLGN2Q8NFZ4 835 aa20.61■□□□□ 0.89
CTDSPL-204ENST00000435525 MPHOSPH8Q99549 860 aa20.61■□□□□ 0.89
CTDSPL-204ENST00000435525 RPS8P62241 208 aaKnown RBP20.6■□□□□ 0.89
CTDSPL-204ENST00000435525 SOGA3Q5TF21 947 aa20.6■□□□□ 0.89
CTDSPL-204ENST00000435525 KAZALD1Q96I82 304 aa20.6■□□□□ 0.89
CTDSPL-204ENST00000435525 SRGAP3O43295 1099 aa20.59■□□□□ 0.89
CTDSPL-204ENST00000435525 MTX1Q13505 466 aa20.59■□□□□ 0.89
CTDSPL-204ENST00000435525 C1orf115Q9H7X2 142 aa20.59■□□□□ 0.89
CTDSPL-204ENST00000435525 PPEF1O14829 653 aaPredicted RBP20.58■□□□□ 0.89
CTDSPL-204ENST00000435525 ATP8B2P98198 1209 aa20.58■□□□□ 0.89
CTDSPL-204ENST00000435525 GRIPAP1Q4V328 841 aa20.58■□□□□ 0.89
CTDSPL-204ENST00000435525 CC2D2BQ6DHV5 1058 aa20.58■□□□□ 0.89
CTDSPL-204ENST00000435525 PRPF40BQ6NWY9 871 aaKnown RBP20.58■□□□□ 0.89
CTDSPL-204ENST00000435525 SEC31BQ9NQW1 1179 aa20.58■□□□□ 0.89
CTDSPL-204ENST00000435525 BCS1LQ9Y276 419 aa20.58■□□□□ 0.89
CTDSPL-204ENST00000435525 KCNA3P22001 575 aa20.57■□□□□ 0.88
CTDSPL-204ENST00000435525 IRX6P78412 446 aaPredicted RBP20.57■□□□□ 0.88
CTDSPL-204ENST00000435525 PELP1Q8IZL8 1130 aaKnown RBP20.57■□□□□ 0.88
CTDSPL-204ENST00000435525 EXOC6Q8TAG9 804 aa20.56■□□□□ 0.88
CTDSPL-204ENST00000435525 CNNM1Q9NRU3 951 aa20.56■□□□□ 0.88
CTDSPL-204ENST00000435525 BSDC1Q9NW68 430 aaPredicted RBP20.56■□□□□ 0.88
CTDSPL-204ENST00000435525 LAMB2P55268 1798 aa20.56■□□□□ 0.88
CTDSPL-204ENST00000435525 KIF13BQ9NQT8 1826 aa20.55■□□□□ 0.88
CTDSPL-204ENST00000435525 CEP85Q6P2H3 762 aa20.55■□□□□ 0.88
CTDSPL-204ENST00000435525 LDHAL6AQ6ZMR3 332 aa20.55■□□□□ 0.88
CTDSPL-204ENST00000435525 CELF1Q92879 486 aaKnown RBP20.55■□□□□ 0.88
CTDSPL-204ENST00000435525 FBXO3Q9UK99 471 aa20.55■□□□□ 0.88
CTDSPL-204ENST00000435525 DDX60Q8IY21 1712 aaKnown RBP20.55■□□□□ 0.88
CTDSPL-204ENST00000435525 TNRC6CQ9HCJ0 1690 aaKnown RBP20.54■□□□□ 0.88
CTDSPL-204ENST00000435525 GPR162Q16538 588 aa20.54■□□□□ 0.88
CTDSPL-204ENST00000435525 SP8Q8IXZ3 490 aa20.54■□□□□ 0.88
CTDSPL-204ENST00000435525 ATP6V0A2Q9Y487 856 aa20.54■□□□□ 0.88
CTDSPL-204ENST00000435525 CCDC93Q567U6 631 aa20.53■□□□□ 0.88
CTDSPL-204ENST00000435525 HSP90AB4PQ58FF6 505 aa20.53■□□□□ 0.88
CTDSPL-204ENST00000435525 ANKRD2Q9GZV1 360 aa20.53■□□□□ 0.88
CTDSPL-204ENST00000435525 ANKRD31Q8N7Z5 1873 aa20.53■□□□□ 0.88
CTDSPL-204ENST00000435525 G3BP1Q13283 466 aaKnown RBP eCLIP20.52■□□□□ 0.88
CTDSPL-204ENST00000435525 OS9Q13438 667 aaPredicted RBP20.52■□□□□ 0.88
CTDSPL-204ENST00000435525 RTKN2Q8IZC4 609 aa20.52■□□□□ 0.88
CTDSPL-204ENST00000435525 SSH3Q8TE77 659 aa20.52■□□□□ 0.88
CTDSPL-204ENST00000435525 COPRSQ9NQ92 184 aa20.52■□□□□ 0.88
CTDSPL-204ENST00000435525 ZNF219Q9P2Y4 722 aaPredicted RBP20.52■□□□□ 0.88
CTDSPL-204ENST00000435525 WWC3Q9ULE0 1092 aa20.52■□□□□ 0.88
CTDSPL-204ENST00000435525 PNMA6EA0A0J9YXQ4 647 aa20.51■□□□□ 0.87
CTDSPL-204ENST00000435525 C21orf2O43822 256 aa20.51■□□□□ 0.87
CTDSPL-204ENST00000435525 GRIN3BO60391 1043 aa20.51■□□□□ 0.87
CTDSPL-204ENST00000435525 POLA2Q14181 598 aa20.51■□□□□ 0.87
CTDSPL-204ENST00000435525 EYA2O00167 538 aa20.5■□□□□ 0.87
CTDSPL-204ENST00000435525 CIAO1O76071 339 aa20.5■□□□□ 0.87
CTDSPL-204ENST00000435525 PTPN12Q05209 780 aaKnown RBP20.5■□□□□ 0.87
CTDSPL-204ENST00000435525 ZNF594Q96JF6 807 aaPredicted RBP20.5■□□□□ 0.87
CTDSPL-204ENST00000435525 ANKIB1Q9P2G1 1089 aa20.5■□□□□ 0.87
CTDSPL-204ENST00000435525 MROH5Q6ZUA9 1318 aa20.5■□□□□ 0.87
CTDSPL-204ENST00000435525 SURF6O75683 361 aaKnown RBP20.49■□□□□ 0.87
CTDSPL-204ENST00000435525 IL15P40933 162 aaPredicted RBP20.49■□□□□ 0.87
CTDSPL-204ENST00000435525 RFX5P48382 616 aaPredicted RBP20.49■□□□□ 0.87
CTDSPL-204ENST00000435525 MPNDQ8N594 471 aa20.49■□□□□ 0.87
CTDSPL-204ENST00000435525 SUPT20HQ8NEM7 779 aa20.49■□□□□ 0.87
CTDSPL-204ENST00000435525 SIL1Q9H173 461 aa20.49■□□□□ 0.87
CTDSPL-204ENST00000435525 RWDD1Q9H446 243 aaPredicted RBP20.49■□□□□ 0.87
CTDSPL-204ENST00000435525 KCNJ4P48050 445 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms