RNA–Protein interactions for RNA: ENST00000434795.5

CPNE1-213, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-213ENST00000434795 TWISTNBQ3B726 338 aaPredicted RBP23.03■■□□□ 1.28
CPNE1-213ENST00000434795 SUPT20HQ8NEM7 779 aa23.03■■□□□ 1.28
CPNE1-213ENST00000434795 KLRG1Q96E93 195 aa23.03■■□□□ 1.28
CPNE1-213ENST00000434795 ANKRD36CQ5JPF3 1778 aa23.03■■□□□ 1.28
CPNE1-213ENST00000434795 COL4A5P29400 1685 aa23.03■■□□□ 1.28
CPNE1-213ENST00000434795 PPIP5K2O43314 1243 aa23.02■■□□□ 1.28
CPNE1-213ENST00000434795 AOC3Q16853 763 aa23.02■■□□□ 1.28
CPNE1-213ENST00000434795 DPP8Q6V1X1 898 aaPredicted RBP23.02■■□□□ 1.28
CPNE1-213ENST00000434795 KSR2Q6VAB6 950 aa23.02■■□□□ 1.28
CPNE1-213ENST00000434795 TMC4Q7Z404 712 aa23.02■■□□□ 1.28
CPNE1-213ENST00000434795 CELF1Q92879 486 aaKnown RBP23.02■■□□□ 1.28
CPNE1-213ENST00000434795 SLC4A2P04920 1241 aa23.01■■□□□ 1.27
CPNE1-213ENST00000434795 EPHX2P34913 555 aa23.01■■□□□ 1.27
CPNE1-213ENST00000434795 LDHDQ86WU2 507 aa23.01■■□□□ 1.27
CPNE1-213ENST00000434795 MAP3K2Q9Y2U5 619 aa23.01■■□□□ 1.27
CPNE1-213ENST00000434795 GJA3Q9Y6H8 435 aa23.01■■□□□ 1.27
CPNE1-213ENST00000434795 PI4KAP2A4QPH2 592 aa23■■□□□ 1.27
CPNE1-213ENST00000434795 PCCAP05165 728 aaPredicted RBP23■■□□□ 1.27
CPNE1-213ENST00000434795 G2E3Q7L622 706 aa23■■□□□ 1.27
CPNE1-213ENST00000434795 NIM1KQ8IY84 436 aa23■■□□□ 1.27
CPNE1-213ENST00000434795 PI4KAP1Q8N8J0 262 aa23■■□□□ 1.27
CPNE1-213ENST00000434795 JARID2Q92833 1246 aaPredicted RBP23■■□□□ 1.27
CPNE1-213ENST00000434795 CWC25Q9NXE8 425 aaPredicted RBP23■■□□□ 1.27
CPNE1-213ENST00000434795 VAMP4O75379 141 aa22.99■■□□□ 1.27
CPNE1-213ENST00000434795 RPS8P62241 208 aaKnown RBP22.99■■□□□ 1.27
CPNE1-213ENST00000434795 PNMA8AQ86V59 439 aaPredicted RBP22.99■■□□□ 1.27
CPNE1-213ENST00000434795 FAM9BQ8IZU0 186 aa22.99■■□□□ 1.27
CPNE1-213ENST00000434795 STK31Q9BXU1 1019 aa22.99■■□□□ 1.27
CPNE1-213ENST00000434795 ZNRF3Q9ULT6 936 aa22.99■■□□□ 1.27
CPNE1-213ENST00000434795 ITGBL1O95965 494 aaPredicted RBP22.98■■□□□ 1.27
CPNE1-213ENST00000434795 IGKV5-2P06315 115 aa22.98■■□□□ 1.27
CPNE1-213ENST00000434795 CXCL9Q07325 125 aa22.98■■□□□ 1.27
CPNE1-213ENST00000434795 KIAA2012Q0VF49 1180 aa22.98■■□□□ 1.27
CPNE1-213ENST00000434795 JMYQ8N9B5 988 aa22.98■■□□□ 1.27
CPNE1-213ENST00000434795 HSP90B1P14625 803 aaKnown RBP22.97■■□□□ 1.27
CPNE1-213ENST00000434795 EAPPQ56P03 285 aaPredicted RBP22.97■■□□□ 1.27
CPNE1-213ENST00000434795 SPINK5Q9NQ38 1064 aaPredicted RBP22.97■■□□□ 1.27
CPNE1-213ENST00000434795 FANCIQ9NVI1 1328 aa22.97■■□□□ 1.27
CPNE1-213ENST00000434795 PDE8AO60658 829 aa22.96■■□□□ 1.27
CPNE1-213ENST00000434795 EPS15P42566 896 aa22.96■■□□□ 1.27
CPNE1-213ENST00000434795 SCNN1DP51172 638 aa22.96■■□□□ 1.27
CPNE1-213ENST00000434795 SEC31BQ9NQW1 1179 aa22.96■■□□□ 1.27
CPNE1-213ENST00000434795 NSFL1CQ9UNZ2 370 aaKnown RBP22.96■■□□□ 1.27
CPNE1-213ENST00000434795 CLEC11AQ9Y240 323 aa22.96■■□□□ 1.27
CPNE1-213ENST00000434795 LAMB2P55268 1798 aa22.96■■□□□ 1.27
CPNE1-213ENST00000434795 SCN4AP35499 1836 aa22.95■■□□□ 1.26
CPNE1-213ENST00000434795 PASKQ96RG2 1323 aa22.95■■□□□ 1.26
CPNE1-213ENST00000434795 GPSM2P81274 684 aa22.94■■□□□ 1.26
CPNE1-213ENST00000434795 EXOSC9Q06265 439 aaKnown RBP22.94■■□□□ 1.26
CPNE1-213ENST00000434795 POLLQ9UGP5 575 aa22.94■■□□□ 1.26
CPNE1-213ENST00000434795 CNTROBQ8N137 903 aa22.93■■□□□ 1.26
CPNE1-213ENST00000434795 TAF1P21675 1872 aa22.93■■□□□ 1.26
CPNE1-213ENST00000434795 DDX60Q8IY21 1712 aaKnown RBP22.93■■□□□ 1.26
CPNE1-213ENST00000434795 LMOD1P29536 600 aaPredicted RBP22.92■■□□□ 1.26
CPNE1-213ENST00000434795 WASHC4Q2M389 1173 aa22.92■■□□□ 1.26
CPNE1-213ENST00000434795 CCDC152Q4G0S7 254 aa22.92■■□□□ 1.26
CPNE1-213ENST00000434795 CREBZFQ9NS37 354 aa22.92■■□□□ 1.26
CPNE1-213ENST00000434795 CDHR2Q9BYE9 1310 aa22.91■■□□□ 1.26
CPNE1-213ENST00000434795 YDJCA8MPS7 323 aa22.91■■□□□ 1.26
CPNE1-213ENST00000434795 NEURL1BA8MQ27 555 aa22.91■■□□□ 1.26
CPNE1-213ENST00000434795 H7C1W4 665 aa22.91■■□□□ 1.26
CPNE1-213ENST00000434795 NEXNQ0ZGT2 675 aa22.91■■□□□ 1.26
CPNE1-213ENST00000434795 FLIIQ13045 1269 aa22.91■■□□□ 1.26
CPNE1-213ENST00000434795 CWF19L2Q2TBE0 894 aaKnown RBP22.91■■□□□ 1.26
CPNE1-213ENST00000434795 MAP1SQ66K74 1059 aaPredicted RBP22.91■■□□□ 1.26
CPNE1-213ENST00000434795 GPRC5DQ9NZD1 345 aa22.91■■□□□ 1.26
CPNE1-213ENST00000434795 PCNTO95613 3336 aa22.9■■□□□ 1.26
CPNE1-213ENST00000434795 RAD17O75943 681 aa22.9■■□□□ 1.26
CPNE1-213ENST00000434795 TNIP1Q15025 636 aa22.9■■□□□ 1.26
CPNE1-213ENST00000434795 CIAPIN1Q6FI81 312 aa22.9■■□□□ 1.26
CPNE1-213ENST00000434795 USP50Q70EL3 339 aaPredicted RBP22.9■■□□□ 1.26
CPNE1-213ENST00000434795 C6orf229H3BNL8 230 aa22.89■■□□□ 1.25
CPNE1-213ENST00000434795 TTLL11Q8NHH1 800 aa22.89■■□□□ 1.25
CPNE1-213ENST00000434795 TBC1D16Q8TBP0 767 aa22.89■■□□□ 1.25
CPNE1-213ENST00000434795 CCDC85AQ96PX6 553 aaPredicted RBP22.89■■□□□ 1.25
CPNE1-213ENST00000434795 PODXL2Q9NZ53 605 aa22.89■■□□□ 1.25
CPNE1-213ENST00000434795 COL4A1P02462 1669 aa22.89■■□□□ 1.25
CPNE1-213ENST00000434795 RIMBP2O15034 1052 aa22.88■■□□□ 1.25
CPNE1-213ENST00000434795 GMPSP49915 693 aaPredicted RBP22.88■■□□□ 1.25
CPNE1-213ENST00000434795 GCKRQ14397 625 aa22.87■■□□□ 1.25
CPNE1-213ENST00000434795 DNAAF4Q8WXU2 420 aa22.87■■□□□ 1.25
CPNE1-213ENST00000434795 MYH16Q9H6N6 1097 aa22.87■■□□□ 1.25
CPNE1-213ENST00000434795 CTSWP56202 376 aa22.86■■□□□ 1.25
CPNE1-213ENST00000434795 FKBP5Q13451 457 aaPredicted RBP22.86■■□□□ 1.25
CPNE1-213ENST00000434795 EYA3Q99504 573 aa22.86■■□□□ 1.25
CPNE1-213ENST00000434795 ADARB2Q9NS39 739 aaKnown RBP22.86■■□□□ 1.25
CPNE1-213ENST00000434795 LTBP1Q14766 1721 aa22.85■■□□□ 1.25
CPNE1-213ENST00000434795 DUOX1Q9NRD9 1551 aa22.85■■□□□ 1.25
CPNE1-213ENST00000434795 TMEM88BA6NKF7 163 aa22.85■■□□□ 1.25
CPNE1-213ENST00000434795 DOK7Q18PE1 504 aa22.85■■□□□ 1.25
CPNE1-213ENST00000434795 ANKRD18AQ8IVF6 992 aa22.85■■□□□ 1.25
CPNE1-213ENST00000434795 LINS1Q8NG48 757 aa22.85■■□□□ 1.25
CPNE1-213ENST00000434795 GPR101Q96P66 508 aaPredicted RBP22.85■■□□□ 1.25
CPNE1-213ENST00000434795 DBNDD1Q9H9R9 158 aa22.85■■□□□ 1.25
CPNE1-213ENST00000434795 KCNQ5Q9NR82 932 aa22.85■■□□□ 1.25
CPNE1-213ENST00000434795 ZNF521Q96K83 1311 aa22.84■■□□□ 1.25
CPNE1-213ENST00000434795 ADAMTSL1Q8N6G6 1762 aa22.84■■□□□ 1.25
CPNE1-213ENST00000434795 CASP7P55210 303 aa22.84■■□□□ 1.25
CPNE1-213ENST00000434795 BCL2L13Q9BXK5 485 aa22.84■■□□□ 1.25
CPNE1-213ENST00000434795 ZC3H12CQ9C0D7 883 aaKnown RBP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms