RNA–Protein interactions for RNA: ENST00000434353.6

CXorf40A-208, Transcript of chromosome X open reading frame 40A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CXorf40A, Length 1,524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXorf40A-208ENST00000434353 LRRFIP2Q9Y608 721 aaKnown RBP23.69■■□□□ 1.38
CXorf40A-208ENST00000434353 SF3B3Q15393 1217 aaKnown RBP23.69■■□□□ 1.38
CXorf40A-208ENST00000434353 TTLL11Q8NHH1 800 aa23.69■■□□□ 1.38
CXorf40A-208ENST00000434353 ZNF622Q969S3 477 aaKnown RBP eCLIP23.69■■□□□ 1.38
CXorf40A-208ENST00000434353 PDZRN3Q9UPQ7 1066 aa23.69■■□□□ 1.38
CXorf40A-208ENST00000434353 CCDC152Q4G0S7 254 aa23.68■■□□□ 1.38
CXorf40A-208ENST00000434353 MASTLQ96GX5 879 aa23.68■■□□□ 1.38
CXorf40A-208ENST00000434353 CRBNQ96SW2 442 aa23.68■■□□□ 1.38
CXorf40A-208ENST00000434353 WWC3Q9ULE0 1092 aa23.68■■□□□ 1.38
CXorf40A-208ENST00000434353 HDAC5Q9UQL6 1122 aa23.68■■□□□ 1.38
CXorf40A-208ENST00000434353 DLEC1Q9Y238 1755 aa23.67■■□□□ 1.38
CXorf40A-208ENST00000434353 NPR1P16066 1061 aa23.67■■□□□ 1.38
CXorf40A-208ENST00000434353 IRX6P78412 446 aaPredicted RBP23.67■■□□□ 1.38
CXorf40A-208ENST00000434353 LMBR1LQ6UX01 489 aa23.67■■□□□ 1.38
CXorf40A-208ENST00000434353 C1orf115Q9H7X2 142 aa23.67■■□□□ 1.38
CXorf40A-208ENST00000434353 CHMP3Q9Y3E7 222 aa23.67■■□□□ 1.38
CXorf40A-208ENST00000434353 GNAI2P04899 355 aa23.66■■□□□ 1.38
CXorf40A-208ENST00000434353 KCNA3P22001 575 aa23.66■■□□□ 1.38
CXorf40A-208ENST00000434353 ANKRD44Q8N8A2 993 aa23.65■■□□□ 1.38
CXorf40A-208ENST00000434353 RBM17Q96I25 401 aaKnown RBP23.65■■□□□ 1.38
CXorf40A-208ENST00000434353 GREM2Q9H772 168 aa23.65■■□□□ 1.38
CXorf40A-208ENST00000434353 CSF1RP07333 972 aa23.64■■□□□ 1.38
CXorf40A-208ENST00000434353 FAM161AQ3B820 660 aa23.64■■□□□ 1.38
CXorf40A-208ENST00000434353 STYK1Q6J9G0 422 aa23.64■■□□□ 1.38
CXorf40A-208ENST00000434353 DDX46Q7L014 1031 aaKnown RBP23.64■■□□□ 1.38
CXorf40A-208ENST00000434353 CHMP4BQ9H444 224 aaKnown RBP23.64■■□□□ 1.38
CXorf40A-208ENST00000434353 HOXA10P31260 410 aaPredicted RBP23.64■■□□□ 1.37
CXorf40A-208ENST00000434353 RABL6Q3YEC7 729 aaPredicted RBP23.64■■□□□ 1.37
CXorf40A-208ENST00000434353 SEC31BQ9NQW1 1179 aa23.64■■□□□ 1.37
CXorf40A-208ENST00000434353 PIM2Q9P1W9 311 aa23.64■■□□□ 1.37
CXorf40A-208ENST00000434353 CACNA1SQ13698 1873 aa23.63■■□□□ 1.37
CXorf40A-208ENST00000434353 ZBTB40Q9NUA8 1239 aa23.63■■□□□ 1.37
CXorf40A-208ENST00000434353 ITGA6P23229 1130 aa23.62■■□□□ 1.37
CXorf40A-208ENST00000434353 CRAMP1Q96RY5 1269 aa23.62■■□□□ 1.37
CXorf40A-208ENST00000434353 TAF1P21675 1872 aa23.62■■□□□ 1.37
CXorf40A-208ENST00000434353 BRCA1P38398 1863 aaKnown RBP23.61■■□□□ 1.37
CXorf40A-208ENST00000434353 ALDH1B1P30837 517 aa23.61■■□□□ 1.37
CXorf40A-208ENST00000434353 TTLL6Q8N841 843 aa23.61■■□□□ 1.37
CXorf40A-208ENST00000434353 CNKSR1Q969H4 720 aa23.61■■□□□ 1.37
CXorf40A-208ENST00000434353 RTL9Q8NET4 1388 aa23.61■■□□□ 1.37
CXorf40A-208ENST00000434353 COL4A1P02462 1669 aa23.6■■□□□ 1.37
CXorf40A-208ENST00000434353 IFIT5Q13325 482 aaKnown RBP23.6■■□□□ 1.37
CXorf40A-208ENST00000434353 CELF1Q92879 486 aaKnown RBP23.6■■□□□ 1.37
CXorf40A-208ENST00000434353 GRAPQ13588 217 aa23.59■■□□□ 1.37
CXorf40A-208ENST00000434353 CCDC57Q2TAC2 916 aa23.59■■□□□ 1.37
CXorf40A-208ENST00000434353 PRPF40BQ6NWY9 871 aaKnown RBP23.59■■□□□ 1.37
CXorf40A-208ENST00000434353 EXOC6Q8TAG9 804 aa23.59■■□□□ 1.37
CXorf40A-208ENST00000434353 GRAPLQ8TC17 118 aaPredicted RBP23.59■■□□□ 1.37
CXorf40A-208ENST00000434353 ANKRD18BA2A2Z9 1011 aa23.59■■□□□ 1.37
CXorf40A-208ENST00000434353 DALRD3Q5D0E6 543 aaKnown RBP23.59■■□□□ 1.37
CXorf40A-208ENST00000434353 CDC5LQ99459 802 aaKnown RBP23.59■■□□□ 1.37
CXorf40A-208ENST00000434353 BCS1LQ9Y276 419 aa23.59■■□□□ 1.37
CXorf40A-208ENST00000434353 ZNF219Q9P2Y4 722 aaPredicted RBP23.58■■□□□ 1.36
CXorf40A-208ENST00000434353 SLX4Q8IY92 1834 aa23.57■■□□□ 1.36
CXorf40A-208ENST00000434353 ANKRD18AQ8IVF6 992 aa23.57■■□□□ 1.36
CXorf40A-208ENST00000434353 PELP1Q8IZL8 1130 aaKnown RBP23.57■■□□□ 1.36
CXorf40A-208ENST00000434353 SPEF2Q9C093 1822 aa23.56■■□□□ 1.36
CXorf40A-208ENST00000434353 SRCAPQ6ZRS2 3230 aa23.56■■□□□ 1.36
CXorf40A-208ENST00000434353 PPEF1O14829 653 aaPredicted RBP23.56■■□□□ 1.36
CXorf40A-208ENST00000434353 SRGAP3O43295 1099 aa23.56■■□□□ 1.36
CXorf40A-208ENST00000434353 RPS8P62241 208 aaKnown RBP23.56■■□□□ 1.36
CXorf40A-208ENST00000434353 MTX1Q13505 466 aa23.56■■□□□ 1.36
CXorf40A-208ENST00000434353 TAF7LQ5H9L4 462 aa23.56■■□□□ 1.36
CXorf40A-208ENST00000434353 ZNF594Q96JF6 807 aaPredicted RBP23.56■■□□□ 1.36
CXorf40A-208ENST00000434353 PNMA6EA0A0J9YXQ4 647 aa23.55■■□□□ 1.36
CXorf40A-208ENST00000434353 CEP85Q6P2H3 762 aa23.55■■□□□ 1.36
CXorf40A-208ENST00000434353 BBOX1O75936 387 aa23.54■■□□□ 1.36
CXorf40A-208ENST00000434353 IGHMBP2P38935 993 aaKnown RBP23.54■■□□□ 1.36
CXorf40A-208ENST00000434353 SLC51AQ86UW1 340 aa23.54■■□□□ 1.36
CXorf40A-208ENST00000434353 KLHDC4Q8TBB5 520 aa23.54■■□□□ 1.36
CXorf40A-208ENST00000434353 ATP8B2P98198 1209 aa23.54■■□□□ 1.36
CXorf40A-208ENST00000434353 C21orf2O43822 256 aa23.53■■□□□ 1.36
CXorf40A-208ENST00000434353 RFX5P48382 616 aaPredicted RBP23.53■■□□□ 1.36
CXorf40A-208ENST00000434353 MPHOSPH8Q99549 860 aa23.53■■□□□ 1.36
CXorf40A-208ENST00000434353 OLFM4Q6UX06 510 aa23.52■■□□□ 1.36
CXorf40A-208ENST00000434353 RPAP2Q8IXW5 612 aaPredicted RBP23.51■■□□□ 1.35
CXorf40A-208ENST00000434353 NEFLP07196 543 aa23.5■■□□□ 1.35
CXorf40A-208ENST00000434353 PTPN12Q05209 780 aaKnown RBP23.5■■□□□ 1.35
CXorf40A-208ENST00000434353 LDHAL6AQ6ZMR3 332 aa23.5■■□□□ 1.35
CXorf40A-208ENST00000434353 TMC4Q7Z404 712 aa23.5■■□□□ 1.35
CXorf40A-208ENST00000434353 BSDC1Q9NW68 430 aaPredicted RBP23.5■■□□□ 1.35
CXorf40A-208ENST00000434353 PA2G4Q9UQ80 394 aaKnown RBP23.5■■□□□ 1.35
CXorf40A-208ENST00000434353 ATP6V0A2Q9Y487 856 aa23.5■■□□□ 1.35
CXorf40A-208ENST00000434353 ARFGEF1Q9Y6D6 1849 aa23.5■■□□□ 1.35
CXorf40A-208ENST00000434353 YBX3P16989 372 aaKnown RBP eCLIP23.49■■□□□ 1.35
CXorf40A-208ENST00000434353 GPR162Q16538 588 aa23.49■■□□□ 1.35
CXorf40A-208ENST00000434353 SSH3Q8TE77 659 aa23.49■■□□□ 1.35
CXorf40A-208ENST00000434353 C7orf43Q8WVR3 580 aa23.49■■□□□ 1.35
CXorf40A-208ENST00000434353 SIL1Q9H173 461 aa23.49■■□□□ 1.35
CXorf40A-208ENST00000434353 TMX4Q9H1E5 349 aaPredicted RBP23.49■■□□□ 1.35
CXorf40A-208ENST00000434353 CNNM1Q9NRU3 951 aa23.49■■□□□ 1.35
CXorf40A-208ENST00000434353 POLA2Q14181 598 aa23.49■■□□□ 1.35
CXorf40A-208ENST00000434353 SIRT2Q8IXJ6 389 aa23.49■■□□□ 1.35
CXorf40A-208ENST00000434353 SP8Q8IXZ3 490 aa23.49■■□□□ 1.35
CXorf40A-208ENST00000434353 PUS3Q9BZE2 481 aaKnown RBP23.49■■□□□ 1.35
CXorf40A-208ENST00000434353 PCDHB15Q9Y5E8 787 aa23.49■■□□□ 1.35
CXorf40A-208ENST00000434353 AAMPQ13685 434 aa23.48■■□□□ 1.35
CXorf40A-208ENST00000434353 LRRC37AA6NMS7 1700 aa23.48■■□□□ 1.35
CXorf40A-208ENST00000434353 LRRC24Q50LG9 513 aa23.47■■□□□ 1.35
CXorf40A-208ENST00000434353 CCDC93Q567U6 631 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms