RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 LAMB2P55268 1798 aa19.22■□□□□ 0.67
CNOT9-205ENST00000433439 A0A0G2JLW4 131 aa19.22■□□□□ 0.67
CNOT9-205ENST00000433439 NEFLP07196 543 aa19.22■□□□□ 0.67
CNOT9-205ENST00000433439 DPEP1P16444 411 aa19.22■□□□□ 0.67
CNOT9-205ENST00000433439 FOXO4P98177 505 aa19.22■□□□□ 0.67
CNOT9-205ENST00000433439 KAZALD1Q96I82 304 aa19.22■□□□□ 0.67
CNOT9-205ENST00000433439 PLA2G12BQ9BX93 195 aa19.22■□□□□ 0.67
CNOT9-205ENST00000433439 CD2APQ9Y5K6 639 aa19.22■□□□□ 0.67
CNOT9-205ENST00000433439 CCDC152Q4G0S7 254 aa19.21■□□□□ 0.67
CNOT9-205ENST00000433439 NLGN2Q8NFZ4 835 aa19.21■□□□□ 0.67
CNOT9-205ENST00000433439 TTLL11Q8NHH1 800 aa19.21■□□□□ 0.67
CNOT9-205ENST00000433439 RIC1Q4ADV7 1423 aa19.2■□□□□ 0.66
CNOT9-205ENST00000433439 SF3B3Q15393 1217 aaKnown RBP19.2■□□□□ 0.66
CNOT9-205ENST00000433439 FAM161AQ3B820 660 aa19.2■□□□□ 0.66
CNOT9-205ENST00000433439 ANKRD44Q8N8A2 993 aa19.2■□□□□ 0.66
CNOT9-205ENST00000433439 GREM2Q9H772 168 aa19.2■□□□□ 0.66
CNOT9-205ENST00000433439 ZBTB40Q9NUA8 1239 aa19.2■□□□□ 0.66
CNOT9-205ENST00000433439 MYH3P11055 1940 aa19.19■□□□□ 0.66
CNOT9-205ENST00000433439 SRGNP10124 158 aa19.19■□□□□ 0.66
CNOT9-205ENST00000433439 NPR1P16066 1061 aa19.19■□□□□ 0.66
CNOT9-205ENST00000433439 TGFB2P61812 414 aa19.19■□□□□ 0.66
CNOT9-205ENST00000433439 DDX46Q7L014 1031 aaKnown RBP19.19■□□□□ 0.66
CNOT9-205ENST00000433439 RBM17Q96I25 401 aaKnown RBP19.19■□□□□ 0.66
CNOT9-205ENST00000433439 SEC31BQ9NQW1 1179 aa19.19■□□□□ 0.66
CNOT9-205ENST00000433439 KIF13BQ9NQT8 1826 aa19.18■□□□□ 0.66
CNOT9-205ENST00000433439 COL11A2P13942 1736 aaPredicted RBP19.18■□□□□ 0.66
CNOT9-205ENST00000433439 CRY2Q49AN0 593 aa19.18■□□□□ 0.66
CNOT9-205ENST00000433439 MASTLQ96GX5 879 aa19.18■□□□□ 0.66
CNOT9-205ENST00000433439 SYT17Q9BSW7 474 aa19.18■□□□□ 0.66
CNOT9-205ENST00000433439 PDZRN3Q9UPQ7 1066 aa19.18■□□□□ 0.66
CNOT9-205ENST00000433439 KLRG2A4D1S0 409 aaPredicted RBP19.17■□□□□ 0.66
CNOT9-205ENST00000433439 CSF1RP07333 972 aa19.17■□□□□ 0.66
CNOT9-205ENST00000433439 ITGA6P23229 1130 aa19.17■□□□□ 0.66
CNOT9-205ENST00000433439 IFIT5Q13325 482 aaKnown RBP19.17■□□□□ 0.66
CNOT9-205ENST00000433439 CCDC57Q2TAC2 916 aa19.17■□□□□ 0.66
CNOT9-205ENST00000433439 TAF7LQ5H9L4 462 aa19.17■□□□□ 0.66
CNOT9-205ENST00000433439 ANKRD18BA2A2Z9 1011 aa19.16■□□□□ 0.66
CNOT9-205ENST00000433439 RABL6Q3YEC7 729 aaPredicted RBP19.16■□□□□ 0.66
CNOT9-205ENST00000433439 ZNF219Q9P2Y4 722 aaPredicted RBP19.16■□□□□ 0.66
CNOT9-205ENST00000433439 SRGAP3O43295 1099 aa19.15■□□□□ 0.66
CNOT9-205ENST00000433439 STYK1Q6J9G0 422 aa19.15■□□□□ 0.66
CNOT9-205ENST00000433439 CELF1Q92879 486 aaKnown RBP19.15■□□□□ 0.66
CNOT9-205ENST00000433439 ZNF594Q96JF6 807 aaPredicted RBP19.15■□□□□ 0.66
CNOT9-205ENST00000433439 TAF1P21675 1872 aa19.15■□□□□ 0.66
CNOT9-205ENST00000433439 CACNA1SQ13698 1873 aa19.14■□□□□ 0.65
CNOT9-205ENST00000433439 PNMA6EA0A0J9YXQ4 647 aa19.14■□□□□ 0.65
CNOT9-205ENST00000433439 KCNA3P22001 575 aa19.14■□□□□ 0.65
CNOT9-205ENST00000433439 CEP85Q6P2H3 762 aa19.14■□□□□ 0.65
CNOT9-205ENST00000433439 PELP1Q8IZL8 1130 aaKnown RBP19.14■□□□□ 0.65
CNOT9-205ENST00000433439 KLHDC4Q8TBB5 520 aa19.14■□□□□ 0.65
CNOT9-205ENST00000433439 CNKSR1Q969H4 720 aa19.14■□□□□ 0.65
CNOT9-205ENST00000433439 CDC5LQ99459 802 aaKnown RBP19.14■□□□□ 0.65
CNOT9-205ENST00000433439 PIM2Q9P1W9 311 aa19.14■□□□□ 0.65
CNOT9-205ENST00000433439 KIAA1551Q9HCM1 1747 aa19.14■□□□□ 0.65
CNOT9-205ENST00000433439 ALDH1B1P30837 517 aa19.13■□□□□ 0.65
CNOT9-205ENST00000433439 HOXA10P31260 410 aaPredicted RBP19.13■□□□□ 0.65
CNOT9-205ENST00000433439 ATP8B2P98198 1209 aa19.13■□□□□ 0.65
CNOT9-205ENST00000433439 GRAPQ13588 217 aa19.13■□□□□ 0.65
CNOT9-205ENST00000433439 ANKRD18AQ8IVF6 992 aa19.13■□□□□ 0.65
CNOT9-205ENST00000433439 TTLL6Q8N841 843 aa19.13■□□□□ 0.65
CNOT9-205ENST00000433439 GRAPLQ8TC17 118 aaPredicted RBP19.13■□□□□ 0.65
CNOT9-205ENST00000433439 CRAMP1Q96RY5 1269 aa19.13■□□□□ 0.65
CNOT9-205ENST00000433439 IGHMBP2P38935 993 aaKnown RBP19.12■□□□□ 0.65
CNOT9-205ENST00000433439 RPS8P62241 208 aaKnown RBP19.12■□□□□ 0.65
CNOT9-205ENST00000433439 PRPF40BQ6NWY9 871 aaKnown RBP19.12■□□□□ 0.65
CNOT9-205ENST00000433439 BCS1LQ9Y276 419 aa19.12■□□□□ 0.65
CNOT9-205ENST00000433439 RTL9Q8NET4 1388 aa19.11■□□□□ 0.65
CNOT9-205ENST00000433439 PPEF1O14829 653 aaPredicted RBP19.11■□□□□ 0.65
CNOT9-205ENST00000433439 DALRD3Q5D0E6 543 aaKnown RBP19.11■□□□□ 0.65
CNOT9-205ENST00000433439 MPHOSPH8Q99549 860 aa19.11■□□□□ 0.65
CNOT9-205ENST00000433439 SIL1Q9H173 461 aa19.11■□□□□ 0.65
CNOT9-205ENST00000433439 PA2G4Q9UQ80 394 aaKnown RBP19.11■□□□□ 0.65
CNOT9-205ENST00000433439 PCDHB15Q9Y5E8 787 aa19.11■□□□□ 0.65
CNOT9-205ENST00000433439 DLEC1Q9Y238 1755 aa19.11■□□□□ 0.65
CNOT9-205ENST00000433439 COL4A1P02462 1669 aa19.11■□□□□ 0.65
CNOT9-205ENST00000433439 SPEF2Q9C093 1822 aa19.1■□□□□ 0.65
CNOT9-205ENST00000433439 MTX1Q13505 466 aa19.1■□□□□ 0.65
CNOT9-205ENST00000433439 RPAP2Q8IXW5 612 aaPredicted RBP19.1■□□□□ 0.65
CNOT9-205ENST00000433439 CNNM1Q9NRU3 951 aa19.1■□□□□ 0.65
CNOT9-205ENST00000433439 HMMRO75330 724 aa19.09■□□□□ 0.65
CNOT9-205ENST00000433439 RFX5P48382 616 aaPredicted RBP19.09■□□□□ 0.65
CNOT9-205ENST00000433439 LDHAL6AQ6ZMR3 332 aa19.09■□□□□ 0.65
CNOT9-205ENST00000433439 SLC51AQ86UW1 340 aa19.09■□□□□ 0.65
CNOT9-205ENST00000433439 C21orf2O43822 256 aa19.08■□□□□ 0.64
CNOT9-205ENST00000433439 BBOX1O75936 387 aa19.08■□□□□ 0.64
CNOT9-205ENST00000433439 PTPN12Q05209 780 aaKnown RBP19.08■□□□□ 0.64
CNOT9-205ENST00000433439 AAMPQ13685 434 aa19.08■□□□□ 0.64
CNOT9-205ENST00000433439 OLFM4Q6UX06 510 aa19.08■□□□□ 0.64
CNOT9-205ENST00000433439 SIRT2Q8IXJ6 389 aa19.08■□□□□ 0.64
CNOT9-205ENST00000433439 PUS3Q9BZE2 481 aaKnown RBP19.08■□□□□ 0.64
CNOT9-205ENST00000433439 TMX4Q9H1E5 349 aaPredicted RBP19.08■□□□□ 0.64
CNOT9-205ENST00000433439 SLX4Q8IY92 1834 aa19.08■□□□□ 0.64
CNOT9-205ENST00000433439 OS9Q13438 667 aaPredicted RBP19.07■□□□□ 0.64
CNOT9-205ENST00000433439 POLA2Q14181 598 aa19.07■□□□□ 0.64
CNOT9-205ENST00000433439 SSH3Q8TE77 659 aa19.07■□□□□ 0.64
CNOT9-205ENST00000433439 SURF6O75683 361 aaKnown RBP19.06■□□□□ 0.64
CNOT9-205ENST00000433439 LRRC24Q50LG9 513 aa19.06■□□□□ 0.64
CNOT9-205ENST00000433439 G3BP1Q13283 466 aaKnown RBP eCLIP19.05■□□□□ 0.64
CNOT9-205ENST00000433439 BCL11AQ9H165 835 aa19.05■□□□□ 0.64
CNOT9-205ENST00000433439 COPRSQ9NQ92 184 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms