RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 PTPN21Q16825 1174 aa15.91■□□□□ 0.14
LRCH3-203ENST00000425562 CREB3L3Q68CJ9 461 aa15.91■□□□□ 0.14
LRCH3-203ENST00000425562 FBXO38Q6PIJ6 1188 aa15.91■□□□□ 0.14
LRCH3-203ENST00000425562 THEMISQ8N1K5 641 aaPredicted RBP15.91■□□□□ 0.14
LRCH3-203ENST00000425562 FEZ1Q99689 392 aa15.91■□□□□ 0.14
LRCH3-203ENST00000425562 FAM208AQ9UK61 1670 aaKnown RBP15.91■□□□□ 0.14
LRCH3-203ENST00000425562 BEND3Q5T5X7 828 aa15.91■□□□□ 0.14
LRCH3-203ENST00000425562 AACSQ86V21 672 aa15.91■□□□□ 0.14
LRCH3-203ENST00000425562 KLHDC4Q8TBB5 520 aa15.91■□□□□ 0.14
LRCH3-203ENST00000425562 C9orf78Q9NZ63 289 aaPredicted RBP15.91■□□□□ 0.14
LRCH3-203ENST00000425562 IFIT2P09913 472 aaKnown RBP15.9■□□□□ 0.14
LRCH3-203ENST00000425562 NMIQ13287 307 aaPredicted RBP15.9■□□□□ 0.14
LRCH3-203ENST00000425562 PTPN14Q15678 1187 aa15.9■□□□□ 0.14
LRCH3-203ENST00000425562 MAP3K2Q9Y2U5 619 aa15.9■□□□□ 0.14
LRCH3-203ENST00000425562 HSP90B1P14625 803 aaKnown RBP15.9■□□□□ 0.14
LRCH3-203ENST00000425562 PIP4K2AP48426 406 aaPredicted RBP15.9■□□□□ 0.14
LRCH3-203ENST00000425562 VPS53Q5VIR6 699 aa15.9■□□□□ 0.14
LRCH3-203ENST00000425562 TMEM51Q9NW97 253 aa15.9■□□□□ 0.14
LRCH3-203ENST00000425562 BECN2A8MW95 431 aa15.9■□□□□ 0.14
LRCH3-203ENST00000425562 CDK11BP21127 795 aaKnown RBP15.9■□□□□ 0.14
LRCH3-203ENST00000425562 NWD1Q149M9 1564 aa15.89■□□□□ 0.13
LRCH3-203ENST00000425562 CLASRPQ8N2M8 674 aaKnown RBP15.89■□□□□ 0.13
LRCH3-203ENST00000425562 ZSWIM6Q9HCJ5 1215 aa15.89■□□□□ 0.13
LRCH3-203ENST00000425562 TLR7Q9NYK1 1049 aaKnown RBP15.89■□□□□ 0.13
LRCH3-203ENST00000425562 PLA2G4DQ86XP0 818 aa15.89■□□□□ 0.13
LRCH3-203ENST00000425562 A0A0D9SFI3 127 aa15.88■□□□□ 0.13
LRCH3-203ENST00000425562 CCDC69A6NI79 296 aa15.88■□□□□ 0.13
LRCH3-203ENST00000425562 H3BQV1 296 aa15.88■□□□□ 0.13
LRCH3-203ENST00000425562 ERCC6LQ2NKX8 1250 aa15.88■□□□□ 0.13
LRCH3-203ENST00000425562 IFFO2Q5TF58 517 aa15.88■□□□□ 0.13
LRCH3-203ENST00000425562 LRRC8AQ8IWT6 810 aa15.88■□□□□ 0.13
LRCH3-203ENST00000425562 POLA2Q14181 598 aa15.88■□□□□ 0.13
LRCH3-203ENST00000425562 ISM2Q6H9L7 571 aa15.88■□□□□ 0.13
LRCH3-203ENST00000425562 BLOC1S2Q6QNY1 142 aa15.88■□□□□ 0.13
LRCH3-203ENST00000425562 TMX1Q9H3N1 280 aa15.88■□□□□ 0.13
LRCH3-203ENST00000425562 TERF2Q15554 542 aa15.87■□□□□ 0.13
LRCH3-203ENST00000425562 BRF1Q92994 677 aa15.87■□□□□ 0.13
LRCH3-203ENST00000425562 GLRX3O76003 335 aaKnown RBP15.87■□□□□ 0.13
LRCH3-203ENST00000425562 SLC39A6Q13433 755 aa15.87■□□□□ 0.13
LRCH3-203ENST00000425562 KRT222Q8N1A0 295 aa15.87■□□□□ 0.13
LRCH3-203ENST00000425562 IP6K1Q92551 441 aa15.87■□□□□ 0.13
LRCH3-203ENST00000425562 ZFP91Q96JP5 570 aaPredicted RBP15.87■□□□□ 0.13
LRCH3-203ENST00000425562 ORAI2Q96SN7 254 aa15.87■□□□□ 0.13
LRCH3-203ENST00000425562 FSD1Q9BTV5 496 aa15.87■□□□□ 0.13
LRCH3-203ENST00000425562 CLSTN2Q9H4D0 955 aa15.87■□□□□ 0.13
LRCH3-203ENST00000425562 SH2B1Q9NRF2 756 aaPredicted RBP15.87■□□□□ 0.13
LRCH3-203ENST00000425562 CCDC171Q6TFL3 1326 aa15.87■□□□□ 0.13
LRCH3-203ENST00000425562 SLC27A2O14975 620 aa15.87■□□□□ 0.13
LRCH3-203ENST00000425562 POLR3GO15318 223 aaPredicted RBP15.87■□□□□ 0.13
LRCH3-203ENST00000425562 RUFY2Q8WXA3 655 aa15.87■□□□□ 0.13
LRCH3-203ENST00000425562 ADCY9O60503 1353 aa15.86■□□□□ 0.13
LRCH3-203ENST00000425562 BIN1O00499 593 aa15.86■□□□□ 0.13
LRCH3-203ENST00000425562 RBM6P78332 1123 aaKnown RBP15.86■□□□□ 0.13
LRCH3-203ENST00000425562 ZNF589Q86UQ0 364 aaPredicted RBP15.86■□□□□ 0.13
LRCH3-203ENST00000425562 ZSCAN31Q96LW9 406 aaPredicted RBP15.86■□□□□ 0.13
LRCH3-203ENST00000425562 MYL6BP14649 208 aa15.86■□□□□ 0.13
LRCH3-203ENST00000425562 NECTIN1Q15223 517 aa15.86■□□□□ 0.13
LRCH3-203ENST00000425562 CCDC129Q6ZRS4 1044 aa15.86■□□□□ 0.13
LRCH3-203ENST00000425562 FAM177A1Q8N128 213 aaPredicted RBP15.86■□□□□ 0.13
LRCH3-203ENST00000425562 PAXBP1Q9Y5B6 917 aa15.86■□□□□ 0.13
LRCH3-203ENST00000425562 ECHDC1Q9NTX5 307 aa15.85■□□□□ 0.13
LRCH3-203ENST00000425562 AOPEPQ8N6M6 819 aa15.85■□□□□ 0.13
LRCH3-203ENST00000425562 EPC1Q9H2F5 836 aa15.85■□□□□ 0.13
LRCH3-203ENST00000425562 TUBGCP6Q96RT7 1819 aa15.85■□□□□ 0.13
LRCH3-203ENST00000425562 RGPD2P0DJD1 1756 aa15.84■□□□□ 0.13
LRCH3-203ENST00000425562 NPHP3Q7Z494 1330 aa15.84■□□□□ 0.13
LRCH3-203ENST00000425562 SLFNL1Q499Z3 407 aa15.84■□□□□ 0.13
LRCH3-203ENST00000425562 C1orf141Q5JVX7 400 aa15.84■□□□□ 0.13
LRCH3-203ENST00000425562 TDRD7Q8NHU6 1098 aaKnown RBP15.84■□□□□ 0.13
LRCH3-203ENST00000425562 SEC62Q99442 399 aaKnown RBP15.84■□□□□ 0.13
LRCH3-203ENST00000425562 SCAND2PQ9GZW5 306 aaPredicted RBP15.84■□□□□ 0.13
LRCH3-203ENST00000425562 CCT2P78371 535 aaKnown RBP15.84■□□□□ 0.13
LRCH3-203ENST00000425562 IRX5P78411 483 aaPredicted RBP15.84■□□□□ 0.13
LRCH3-203ENST00000425562 SYT10Q6XYQ8 523 aa15.84■□□□□ 0.13
LRCH3-203ENST00000425562 TOB2Q14106 344 aaPredicted RBP15.84■□□□□ 0.13
LRCH3-203ENST00000425562 DDX19AQ9NUU7 478 aaKnown RBP15.84■□□□□ 0.13
LRCH3-203ENST00000425562 ZNF446Q9NWS9 450 aa15.84■□□□□ 0.13
LRCH3-203ENST00000425562 ZC3H6P61129 1189 aaKnown RBP15.83■□□□□ 0.12
LRCH3-203ENST00000425562 CCAR1Q8IX12 1150 aaKnown RBP15.83■□□□□ 0.12
LRCH3-203ENST00000425562 ZNF397Q8NF99 534 aaPredicted RBP15.83■□□□□ 0.12
LRCH3-203ENST00000425562 MORC2Q9Y6X9 1032 aaPredicted RBP15.83■□□□□ 0.12
LRCH3-203ENST00000425562 SMC2O95347 1197 aa15.83■□□□□ 0.12
LRCH3-203ENST00000425562 GOLGA8FQ08AF8 430 aa15.83■□□□□ 0.12
LRCH3-203ENST00000425562 GOLGA8DPQ0D2H9 430 aa15.83■□□□□ 0.12
LRCH3-203ENST00000425562 CHST3Q7LGC8 479 aa15.83■□□□□ 0.12
LRCH3-203ENST00000425562 CHMP4AQ9BY43 222 aa15.83■□□□□ 0.12
LRCH3-203ENST00000425562 GOLPH3LQ9H4A5 285 aa15.83■□□□□ 0.12
LRCH3-203ENST00000425562 AXIN2Q9Y2T1 843 aa15.83■□□□□ 0.12
LRCH3-203ENST00000425562 EAF2Q96CJ1 260 aaPredicted RBP15.82■□□□□ 0.12
LRCH3-203ENST00000425562 SUCLG2Q96I99 432 aa15.82■□□□□ 0.12
LRCH3-203ENST00000425562 LRRC37A3O60309 1634 aa15.82■□□□□ 0.12
LRCH3-203ENST00000425562 CEMIPQ8WUJ3 1361 aa15.82■□□□□ 0.12
LRCH3-203ENST00000425562 RNMTO43148 476 aaKnown RBP15.82■□□□□ 0.12
LRCH3-203ENST00000425562 BICC1Q9H694 974 aaKnown RBP15.82■□□□□ 0.12
LRCH3-203ENST00000425562 NCOA5Q9HCD5 579 aaKnown RBP15.82■□□□□ 0.12
LRCH3-203ENST00000425562 PXDNQ92626 1479 aa15.81■□□□□ 0.12
LRCH3-203ENST00000425562 PDCP20941 246 aa15.81■□□□□ 0.12
LRCH3-203ENST00000425562 GABPB1Q06547 395 aaPredicted RBP15.81■□□□□ 0.12
LRCH3-203ENST00000425562 PLEKHO1Q53GL0 409 aaPredicted RBP15.81■□□□□ 0.12
LRCH3-203ENST00000425562 RAB11FIP4Q86YS3 637 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms