RNA–Protein interactions for RNA: ENST00000420724.1

AC007389.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC007389.3, Length 1,656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007389.3-201ENST00000420724 SF3B3Q15393 1217 aaKnown RBP16.57■□□□□ 0.24
AC007389.3-201ENST00000420724 RABL6Q3YEC7 729 aaPredicted RBP16.57■□□□□ 0.24
AC007389.3-201ENST00000420724 TTLL11Q8NHH1 800 aa16.57■□□□□ 0.24
AC007389.3-201ENST00000420724 NLRP3Q96P20 1036 aa16.57■□□□□ 0.24
AC007389.3-201ENST00000420724 GNAI2P04899 355 aa16.56■□□□□ 0.24
AC007389.3-201ENST00000420724 CSF1RP07333 972 aa16.56■□□□□ 0.24
AC007389.3-201ENST00000420724 CHRNA5P30532 468 aa16.56■□□□□ 0.24
AC007389.3-201ENST00000420724 PPP1R1BQ9UD71 204 aaPredicted RBP16.56■□□□□ 0.24
AC007389.3-201ENST00000420724 CD2APQ9Y5K6 639 aa16.56■□□□□ 0.24
AC007389.3-201ENST00000420724 SRGNP10124 158 aa16.56■□□□□ 0.24
AC007389.3-201ENST00000420724 PDE6BP35913 854 aa16.56■□□□□ 0.24
AC007389.3-201ENST00000420724 LMBR1LQ6UX01 489 aa16.56■□□□□ 0.24
AC007389.3-201ENST00000420724 CCDC85AQ96PX6 553 aaPredicted RBP16.56■□□□□ 0.24
AC007389.3-201ENST00000420724 FHDC1Q9C0D6 1143 aaPredicted RBP16.56■□□□□ 0.24
AC007389.3-201ENST00000420724 HSP90B1P14625 803 aaKnown RBP16.55■□□□□ 0.24
AC007389.3-201ENST00000420724 KCNA3P22001 575 aa16.55■□□□□ 0.24
AC007389.3-201ENST00000420724 FAM161AQ3B820 660 aa16.55■□□□□ 0.24
AC007389.3-201ENST00000420724 KLHL34Q8N239 644 aa16.55■□□□□ 0.24
AC007389.3-201ENST00000420724 NLGN2Q8NFZ4 835 aa16.55■□□□□ 0.24
AC007389.3-201ENST00000420724 GREM2Q9H772 168 aa16.55■□□□□ 0.24
AC007389.3-201ENST00000420724 C2CD5Q86YS7 1000 aa16.54■□□□□ 0.24
AC007389.3-201ENST00000420724 DLEC1Q9Y238 1755 aa16.53■□□□□ 0.24
AC007389.3-201ENST00000420724 A0A0G2JLW4 131 aa16.53■□□□□ 0.24
AC007389.3-201ENST00000420724 DPEP1P16444 411 aa16.53■□□□□ 0.24
AC007389.3-201ENST00000420724 TGFB2P61812 414 aa16.53■□□□□ 0.24
AC007389.3-201ENST00000420724 SEC31BQ9NQW1 1179 aa16.53■□□□□ 0.24
AC007389.3-201ENST00000420724 KDM2BQ8NHM5 1336 aa16.53■□□□□ 0.24
AC007389.3-201ENST00000420724 RTL9Q8NET4 1388 aa16.53■□□□□ 0.24
AC007389.3-201ENST00000420724 HOXA10P31260 410 aaPredicted RBP16.53■□□□□ 0.24
AC007389.3-201ENST00000420724 MTX1Q13505 466 aa16.53■□□□□ 0.24
AC007389.3-201ENST00000420724 CCDC152Q4G0S7 254 aa16.53■□□□□ 0.24
AC007389.3-201ENST00000420724 CHMP4BQ9H444 224 aaKnown RBP16.53■□□□□ 0.24
AC007389.3-201ENST00000420724 HDAC5Q9UQL6 1122 aa16.53■□□□□ 0.24
AC007389.3-201ENST00000420724 TAF1P21675 1872 aa16.52■□□□□ 0.24
AC007389.3-201ENST00000420724 PNMA6EA0A0J9YXQ4 647 aa16.52■□□□□ 0.23
AC007389.3-201ENST00000420724 H0YIN7 160 aa16.52■□□□□ 0.23
AC007389.3-201ENST00000420724 CEP85Q6P2H3 762 aa16.52■□□□□ 0.23
AC007389.3-201ENST00000420724 CENPQQ7L2Z9 268 aaPredicted RBP16.52■□□□□ 0.23
AC007389.3-201ENST00000420724 SYT17Q9BSW7 474 aa16.52■□□□□ 0.23
AC007389.3-201ENST00000420724 NPR1P16066 1061 aa16.51■□□□□ 0.23
AC007389.3-201ENST00000420724 SIRT2Q8IXJ6 389 aa16.51■□□□□ 0.23
AC007389.3-201ENST00000420724 RPGRQ92834 1020 aaKnown RBP16.51■□□□□ 0.23
AC007389.3-201ENST00000420724 MASTLQ96GX5 879 aa16.51■□□□□ 0.23
AC007389.3-201ENST00000420724 PDZRN3Q9UPQ7 1066 aa16.51■□□□□ 0.23
AC007389.3-201ENST00000420724 CHMP3Q9Y3E7 222 aa16.51■□□□□ 0.23
AC007389.3-201ENST00000420724 PCDHB15Q9Y5E8 787 aa16.51■□□□□ 0.23
AC007389.3-201ENST00000420724 ITGA6P23229 1130 aa16.5■□□□□ 0.23
AC007389.3-201ENST00000420724 RFX5P48382 616 aaPredicted RBP16.5■□□□□ 0.23
AC007389.3-201ENST00000420724 STYK1Q6J9G0 422 aa16.5■□□□□ 0.23
AC007389.3-201ENST00000420724 SLC51AQ86UW1 340 aa16.5■□□□□ 0.23
AC007389.3-201ENST00000420724 CELF1Q92879 486 aaKnown RBP16.5■□□□□ 0.23
AC007389.3-201ENST00000420724 BRCA1P38398 1863 aaKnown RBP16.5■□□□□ 0.23
AC007389.3-201ENST00000420724 CRAMP1Q96RY5 1269 aa16.5■□□□□ 0.23
AC007389.3-201ENST00000420724 SRGAP3O43295 1099 aa16.49■□□□□ 0.23
AC007389.3-201ENST00000420724 ATP8B2P98198 1209 aa16.49■□□□□ 0.23
AC007389.3-201ENST00000420724 DDX46Q7L014 1031 aaKnown RBP16.49■□□□□ 0.23
AC007389.3-201ENST00000420724 KLHDC4Q8TBB5 520 aa16.49■□□□□ 0.23
AC007389.3-201ENST00000420724 ZNF622Q969S3 477 aaKnown RBP eCLIP16.49■□□□□ 0.23
AC007389.3-201ENST00000420724 RBM17Q96I25 401 aaKnown RBP16.49■□□□□ 0.23
AC007389.3-201ENST00000420724 ZNF594Q96JF6 807 aaPredicted RBP16.49■□□□□ 0.23
AC007389.3-201ENST00000420724 UTRNP46939 3433 aa16.49■□□□□ 0.23
AC007389.3-201ENST00000420724 IFIT5Q13325 482 aaKnown RBP16.48■□□□□ 0.23
AC007389.3-201ENST00000420724 GRAPQ13588 217 aa16.48■□□□□ 0.23
AC007389.3-201ENST00000420724 POLA2Q14181 598 aa16.48■□□□□ 0.23
AC007389.3-201ENST00000420724 GRAPLQ8TC17 118 aaPredicted RBP16.48■□□□□ 0.23
AC007389.3-201ENST00000420724 SSH3Q8TE77 659 aa16.48■□□□□ 0.23
AC007389.3-201ENST00000420724 WWC3Q9ULE0 1092 aa16.48■□□□□ 0.23
AC007389.3-201ENST00000420724 ANKRD18BA2A2Z9 1011 aa16.47■□□□□ 0.23
AC007389.3-201ENST00000420724 PTPN12Q05209 780 aaKnown RBP16.47■□□□□ 0.23
AC007389.3-201ENST00000420724 CCDC57Q2TAC2 916 aa16.47■□□□□ 0.23
AC007389.3-201ENST00000420724 RPAP2Q8IXW5 612 aaPredicted RBP16.47■□□□□ 0.23
AC007389.3-201ENST00000420724 TSHZ2Q9NRE2 1034 aa16.47■□□□□ 0.23
AC007389.3-201ENST00000420724 SLX4Q8IY92 1834 aa16.47■□□□□ 0.23
AC007389.3-201ENST00000420724 PRPF40BQ6NWY9 871 aaKnown RBP16.46■□□□□ 0.23
AC007389.3-201ENST00000420724 PA2G4Q9UQ80 394 aaKnown RBP16.46■□□□□ 0.23
AC007389.3-201ENST00000420724 CACNA1SQ13698 1873 aa16.46■□□□□ 0.23
AC007389.3-201ENST00000420724 ALDH1B1P30837 517 aa16.46■□□□□ 0.23
AC007389.3-201ENST00000420724 RPS8P62241 208 aaKnown RBP16.46■□□□□ 0.23
AC007389.3-201ENST00000420724 CNKSR1Q969H4 720 aa16.46■□□□□ 0.23
AC007389.3-201ENST00000420724 CDC5LQ99459 802 aaKnown RBP16.46■□□□□ 0.23
AC007389.3-201ENST00000420724 PIM2Q9P1W9 311 aa16.46■□□□□ 0.23
AC007389.3-201ENST00000420724 SPEF2Q9C093 1822 aa16.45■□□□□ 0.22
AC007389.3-201ENST00000420724 TTLL6Q8N841 843 aa16.45■□□□□ 0.22
AC007389.3-201ENST00000420724 IGHDP01880 384 aa16.44■□□□□ 0.22
AC007389.3-201ENST00000420724 OLFM4Q6UX06 510 aa16.44■□□□□ 0.22
AC007389.3-201ENST00000420724 ANKRD18AQ8IVF6 992 aa16.44■□□□□ 0.22
AC007389.3-201ENST00000420724 C7orf43Q8WVR3 580 aa16.44■□□□□ 0.22
AC007389.3-201ENST00000420724 PUS3Q9BZE2 481 aaKnown RBP16.44■□□□□ 0.22
AC007389.3-201ENST00000420724 COPRSQ9NQ92 184 aa16.44■□□□□ 0.22
AC007389.3-201ENST00000420724 LRRC37AA6NMS7 1700 aa16.43■□□□□ 0.22
AC007389.3-201ENST00000420724 PPEF1O14829 653 aaPredicted RBP16.43■□□□□ 0.22
AC007389.3-201ENST00000420724 BBOX1O75936 387 aa16.43■□□□□ 0.22
AC007389.3-201ENST00000420724 SNED1Q8TER0 1413 aa16.43■□□□□ 0.22
AC007389.3-201ENST00000420724 LRRC24Q50LG9 513 aa16.43■□□□□ 0.22
AC007389.3-201ENST00000420724 BSDC1Q9NW68 430 aaPredicted RBP16.43■□□□□ 0.22
AC007389.3-201ENST00000420724 IGHMBP2P38935 993 aaKnown RBP16.42■□□□□ 0.22
AC007389.3-201ENST00000420724 DALRD3Q5D0E6 543 aaKnown RBP16.42■□□□□ 0.22
AC007389.3-201ENST00000420724 TAF7LQ5H9L4 462 aa16.42■□□□□ 0.22
AC007389.3-201ENST00000420724 LDHAL6AQ6ZMR3 332 aa16.42■□□□□ 0.22
AC007389.3-201ENST00000420724 ATG9AQ7Z3C6 839 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms