RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 LRRFIP2Q9Y608 721 aaKnown RBP10.16□□□□□ -0.78
MDC1-203ENST00000417033 UBTFL1P0CB47 393 aaPredicted RBP10.15□□□□□ -0.78
MDC1-203ENST00000417033 ANKRD44Q8N8A2 993 aa10.15□□□□□ -0.78
MDC1-203ENST00000417033 FAM212AQ96EL1 285 aa10.15□□□□□ -0.78
MDC1-203ENST00000417033 ZBTB40Q9NUA8 1239 aa10.15□□□□□ -0.78
MDC1-203ENST00000417033 CIZ1Q9ULV3 898 aaPredicted RBP10.15□□□□□ -0.78
MDC1-203ENST00000417033 FARP1Q9Y4F1 1045 aaPredicted RBP10.15□□□□□ -0.78
MDC1-203ENST00000417033 PCDHB15Q9Y5E8 787 aa10.15□□□□□ -0.78
MDC1-203ENST00000417033 COL4A1P02462 1669 aa10.15□□□□□ -0.79
MDC1-203ENST00000417033 IBTKQ9P2D0 1353 aaPredicted RBP10.14□□□□□ -0.79
MDC1-203ENST00000417033 SH3TC1Q8TE82 1336 aa10.14□□□□□ -0.79
MDC1-203ENST00000417033 DDX60Q8IY21 1712 aaKnown RBP10.14□□□□□ -0.79
MDC1-203ENST00000417033 NRXN2Q9P2S2 1712 aa10.14□□□□□ -0.79
MDC1-203ENST00000417033 IRS4O14654 1257 aaPredicted RBP10.14□□□□□ -0.79
MDC1-203ENST00000417033 NEFLP07196 543 aa10.14□□□□□ -0.79
MDC1-203ENST00000417033 FOXO4P98177 505 aa10.14□□□□□ -0.79
MDC1-203ENST00000417033 PPP1R42Q7Z4L9 355 aa10.14□□□□□ -0.79
MDC1-203ENST00000417033 CNBD1Q8NA66 436 aa10.14□□□□□ -0.79
MDC1-203ENST00000417033 SLC16A10Q8TF71 515 aa10.14□□□□□ -0.79
MDC1-203ENST00000417033 CCDC85AQ96PX6 553 aaPredicted RBP10.14□□□□□ -0.79
MDC1-203ENST00000417033 SGIP1Q9BQI5 828 aa10.14□□□□□ -0.79
MDC1-203ENST00000417033 MTFR1LQ9H019 292 aa10.14□□□□□ -0.79
MDC1-203ENST00000417033 BICC1Q9H694 974 aaKnown RBP10.14□□□□□ -0.79
MDC1-203ENST00000417033 CDHR2Q9BYE9 1310 aa10.13□□□□□ -0.79
MDC1-203ENST00000417033 GNAI3P08754 354 aa10.13□□□□□ -0.79
MDC1-203ENST00000417033 PTGER2P43116 358 aa10.13□□□□□ -0.79
MDC1-203ENST00000417033 SLC51AQ86UW1 340 aa10.13□□□□□ -0.79
MDC1-203ENST00000417033 SIRT2Q8IXJ6 389 aa10.13□□□□□ -0.79
MDC1-203ENST00000417033 PARP3Q9Y6F1 533 aa10.13□□□□□ -0.79
MDC1-203ENST00000417033 PNMA6EA0A0J9YXQ4 647 aa10.12□□□□□ -0.79
MDC1-203ENST00000417033 GNAI2P04899 355 aa10.12□□□□□ -0.79
MDC1-203ENST00000417033 CEP85Q6P2H3 762 aa10.12□□□□□ -0.79
MDC1-203ENST00000417033 ANKRD31Q8N7Z5 1873 aa10.12□□□□□ -0.79
MDC1-203ENST00000417033 LAMB2P55268 1798 aa10.11□□□□□ -0.79
MDC1-203ENST00000417033 C10orf71Q711Q0 1435 aa10.11□□□□□ -0.79
MDC1-203ENST00000417033 NPHP1O15259 732 aa10.11□□□□□ -0.79
MDC1-203ENST00000417033 ECM2O94769 699 aaPredicted RBP10.11□□□□□ -0.79
MDC1-203ENST00000417033 GTF2E1P29083 439 aaPredicted RBP10.11□□□□□ -0.79
MDC1-203ENST00000417033 CTSWP56202 376 aa10.11□□□□□ -0.79
MDC1-203ENST00000417033 FAM161AQ3B820 660 aa10.11□□□□□ -0.79
MDC1-203ENST00000417033 RABL6Q3YEC7 729 aaPredicted RBP10.11□□□□□ -0.79
MDC1-203ENST00000417033 LMBR1LQ6UX01 489 aa10.11□□□□□ -0.79
MDC1-203ENST00000417033 TPTE2Q6XPS3 522 aa10.11□□□□□ -0.79
MDC1-203ENST00000417033 PLA2G12BQ9BX93 195 aa10.11□□□□□ -0.79
MDC1-203ENST00000417033 NYXQ9GZU5 481 aa10.11□□□□□ -0.79
MDC1-203ENST00000417033 PDE8AO60658 829 aa10.1□□□□□ -0.79
MDC1-203ENST00000417033 SLC10A5Q5PT55 438 aa10.1□□□□□ -0.79
MDC1-203ENST00000417033 TTLL11Q8NHH1 800 aa10.1□□□□□ -0.79
MDC1-203ENST00000417033 KLHDC4Q8TBB5 520 aa10.1□□□□□ -0.79
MDC1-203ENST00000417033 GREM2Q9H772 168 aa10.1□□□□□ -0.79
MDC1-203ENST00000417033 SEC31BQ9NQW1 1179 aa10.1□□□□□ -0.79
MDC1-203ENST00000417033 CHMP3Q9Y3E7 222 aa10.1□□□□□ -0.79
MDC1-203ENST00000417033 COL11A2P13942 1736 aaPredicted RBP10.1□□□□□ -0.79
MDC1-203ENST00000417033 RIC1Q4ADV7 1423 aa10.09□□□□□ -0.79
MDC1-203ENST00000417033 IGHDP01880 384 aa10.09□□□□□ -0.79
MDC1-203ENST00000417033 CSF1RP07333 972 aa10.09□□□□□ -0.79
MDC1-203ENST00000417033 CHRNA5P30532 468 aa10.09□□□□□ -0.79
MDC1-203ENST00000417033 RFX5P48382 616 aaPredicted RBP10.09□□□□□ -0.79
MDC1-203ENST00000417033 ST5P78524 1137 aa10.09□□□□□ -0.79
MDC1-203ENST00000417033 DCAF8Q5TAQ9 597 aa10.09□□□□□ -0.79
MDC1-203ENST00000417033 ZNF594Q96JF6 807 aaPredicted RBP10.09□□□□□ -0.79
MDC1-203ENST00000417033 PA2G4Q9UQ80 394 aaKnown RBP10.09□□□□□ -0.79
MDC1-203ENST00000417033 GTF3C3Q9Y5Q9 886 aa10.09□□□□□ -0.79
MDC1-203ENST00000417033 SRGAP3O43295 1099 aa10.08□□□□□ -0.8
MDC1-203ENST00000417033 POLD1P28340 1107 aa10.08□□□□□ -0.8
MDC1-203ENST00000417033 ATP8B2P98198 1209 aa10.08□□□□□ -0.8
MDC1-203ENST00000417033 MTX1Q13505 466 aa10.08□□□□□ -0.8
MDC1-203ENST00000417033 B4GALNT3Q6L9W6 998 aa10.08□□□□□ -0.8
MDC1-203ENST00000417033 RASEFQ8IZ41 740 aa10.08□□□□□ -0.8
MDC1-203ENST00000417033 SPON1Q9HCB6 807 aa10.08□□□□□ -0.8
MDC1-203ENST00000417033 LRP5O75197 1615 aa10.07□□□□□ -0.8
MDC1-203ENST00000417033 TAF1P21675 1872 aa10.07□□□□□ -0.8
MDC1-203ENST00000417033 ITGA6P23229 1130 aa10.07□□□□□ -0.8
MDC1-203ENST00000417033 SF3B3Q15393 1217 aaKnown RBP10.07□□□□□ -0.8
MDC1-203ENST00000417033 CRY2Q49AN0 593 aa10.07□□□□□ -0.8
MDC1-203ENST00000417033 CELF1Q92879 486 aaKnown RBP10.07□□□□□ -0.8
MDC1-203ENST00000417033 NLRP3Q96P20 1036 aa10.07□□□□□ -0.8
MDC1-203ENST00000417033 BRIP1Q9BX63 1249 aa10.07□□□□□ -0.8
MDC1-203ENST00000417033 PUS3Q9BZE2 481 aaKnown RBP10.07□□□□□ -0.8
MDC1-203ENST00000417033 WWC3Q9ULE0 1092 aa10.07□□□□□ -0.8
MDC1-203ENST00000417033 MYH3P11055 1940 aa10.07□□□□□ -0.8
MDC1-203ENST00000417033 KIAA1551Q9HCM1 1747 aa10.07□□□□□ -0.8
MDC1-203ENST00000417033 KLRG2A4D1S0 409 aaPredicted RBP10.06□□□□□ -0.8
MDC1-203ENST00000417033 C2CD5Q86YS7 1000 aa10.06□□□□□ -0.8
MDC1-203ENST00000417033 SSH3Q8TE77 659 aa10.06□□□□□ -0.8
MDC1-203ENST00000417033 SIL1Q9H173 461 aa10.06□□□□□ -0.8
MDC1-203ENST00000417033 CHMP4BQ9H444 224 aaKnown RBP10.06□□□□□ -0.8
MDC1-203ENST00000417033 PPP1R1BQ9UD71 204 aaPredicted RBP10.06□□□□□ -0.8
MDC1-203ENST00000417033 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.06□□□□□ -0.8
MDC1-203ENST00000417033 RTL9Q8NET4 1388 aa10.05□□□□□ -0.8
MDC1-203ENST00000417033 A0A0G2JLW4 131 aa10.05□□□□□ -0.8
MDC1-203ENST00000417033 SRGNP10124 158 aa10.05□□□□□ -0.8
MDC1-203ENST00000417033 DPEP1P16444 411 aa10.05□□□□□ -0.8
MDC1-203ENST00000417033 PTPN12Q05209 780 aaKnown RBP10.05□□□□□ -0.8
MDC1-203ENST00000417033 CCDC152Q4G0S7 254 aa10.05□□□□□ -0.8
MDC1-203ENST00000417033 LRRC24Q50LG9 513 aa10.05□□□□□ -0.8
MDC1-203ENST00000417033 RPAP2Q8IXW5 612 aaPredicted RBP10.05□□□□□ -0.8
MDC1-203ENST00000417033 NLGN2Q8NFZ4 835 aa10.05□□□□□ -0.8
MDC1-203ENST00000417033 EXOC6BQ9Y2D4 811 aa10.05□□□□□ -0.8
MDC1-203ENST00000417033 KIF13BQ9NQT8 1826 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms