RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 TPTE2Q6XPS3 522 aa12.41□□□□□ -0.42
DDB1-202ENST00000414411 CDHR2Q9BYE9 1310 aa12.41□□□□□ -0.42
DDB1-202ENST00000414411 SRCAPQ6ZRS2 3230 aa12.41□□□□□ -0.42
DDB1-202ENST00000414411 FAM177BA6PVY3 158 aa12.41□□□□□ -0.42
DDB1-202ENST00000414411 SLC10A5Q5PT55 438 aa12.41□□□□□ -0.42
DDB1-202ENST00000414411 NBPF5PQ86XG9 351 aaPredicted RBP12.41□□□□□ -0.42
DDB1-202ENST00000414411 NYXQ9GZU5 481 aa12.41□□□□□ -0.42
DDB1-202ENST00000414411 MTFR1LQ9H019 292 aa12.41□□□□□ -0.42
DDB1-202ENST00000414411 PCDHB15Q9Y5E8 787 aa12.41□□□□□ -0.42
DDB1-202ENST00000414411 SH3TC1Q8TE82 1336 aa12.4□□□□□ -0.42
DDB1-202ENST00000414411 NRXN2Q9P2S2 1712 aa12.4□□□□□ -0.42
DDB1-202ENST00000414411 UBTFL1P0CB47 393 aaPredicted RBP12.4□□□□□ -0.42
DDB1-202ENST00000414411 RTL5Q5HYW3 569 aaPredicted RBP12.4□□□□□ -0.42
DDB1-202ENST00000414411 NUTM1Q86Y26 1132 aa12.4□□□□□ -0.42
DDB1-202ENST00000414411 PLA2G12BQ9BX93 195 aa12.4□□□□□ -0.42
DDB1-202ENST00000414411 ZBTB7AO95365 584 aa12.39□□□□□ -0.43
DDB1-202ENST00000414411 ERFEQ4G0M1 354 aa12.39□□□□□ -0.43
DDB1-202ENST00000414411 PRR5LQ6MZQ0 368 aa12.39□□□□□ -0.43
DDB1-202ENST00000414411 DDRGK1Q96HY6 314 aa12.39□□□□□ -0.43
DDB1-202ENST00000414411 SUCLG2Q96I99 432 aa12.39□□□□□ -0.43
DDB1-202ENST00000414411 IRS4O14654 1257 aaPredicted RBP12.39□□□□□ -0.43
DDB1-202ENST00000414411 GNAI2P04899 355 aa12.39□□□□□ -0.43
DDB1-202ENST00000414411 EPHA10Q5JZY3 1008 aa12.39□□□□□ -0.43
DDB1-202ENST00000414411 SGIP1Q9BQI5 828 aa12.39□□□□□ -0.43
DDB1-202ENST00000414411 HDAC5Q9UQL6 1122 aa12.39□□□□□ -0.43
DDB1-202ENST00000414411 LRRFIP2Q9Y608 721 aaKnown RBP12.39□□□□□ -0.43
DDB1-202ENST00000414411 FOXO4P98177 505 aa12.38□□□□□ -0.43
DDB1-202ENST00000414411 CNBD1Q8NA66 436 aa12.38□□□□□ -0.43
DDB1-202ENST00000414411 PARP3Q9Y6F1 533 aa12.38□□□□□ -0.43
DDB1-202ENST00000414411 HCLS1P14317 486 aaPredicted RBP12.37□□□□□ -0.43
DDB1-202ENST00000414411 DSG3P32926 999 aa12.37□□□□□ -0.43
DDB1-202ENST00000414411 RABL6Q3YEC7 729 aaPredicted RBP12.37□□□□□ -0.43
DDB1-202ENST00000414411 ANKRD44Q8N8A2 993 aa12.37□□□□□ -0.43
DDB1-202ENST00000414411 C1orf115Q9H7X2 142 aa12.37□□□□□ -0.43
DDB1-202ENST00000414411 DDX60Q8IY21 1712 aaKnown RBP12.37□□□□□ -0.43
DDB1-202ENST00000414411 ABCC12Q96J65 1359 aa12.37□□□□□ -0.43
DDB1-202ENST00000414411 PDE8AO60658 829 aa12.37□□□□□ -0.43
DDB1-202ENST00000414411 CSF1RP07333 972 aa12.37□□□□□ -0.43
DDB1-202ENST00000414411 GTF2E1P29083 439 aaPredicted RBP12.37□□□□□ -0.43
DDB1-202ENST00000414411 MTX1Q13505 466 aa12.37□□□□□ -0.43
DDB1-202ENST00000414411 BICC1Q9H694 974 aaKnown RBP12.37□□□□□ -0.43
DDB1-202ENST00000414411 KLRG2A4D1S0 409 aaPredicted RBP12.36□□□□□ -0.43
DDB1-202ENST00000414411 HSP90B1P14625 803 aaKnown RBP12.36□□□□□ -0.43
DDB1-202ENST00000414411 PTGER2P43116 358 aa12.36□□□□□ -0.43
DDB1-202ENST00000414411 SIRT2Q8IXJ6 389 aa12.36□□□□□ -0.43
DDB1-202ENST00000414411 CCDC24Q8N4L8 307 aa12.36□□□□□ -0.43
DDB1-202ENST00000414411 TTLL11Q8NHH1 800 aa12.36□□□□□ -0.43
DDB1-202ENST00000414411 RWDD1Q9H446 243 aaPredicted RBP12.36□□□□□ -0.43
DDB1-202ENST00000414411 MYH3P11055 1940 aa12.36□□□□□ -0.43
DDB1-202ENST00000414411 RIC1Q4ADV7 1423 aa12.36□□□□□ -0.43
DDB1-202ENST00000414411 ATP8B2P98198 1209 aa12.35□□□□□ -0.43
DDB1-202ENST00000414411 SF3B3Q15393 1217 aaKnown RBP12.35□□□□□ -0.43
DDB1-202ENST00000414411 CEP85Q6P2H3 762 aa12.35□□□□□ -0.43
DDB1-202ENST00000414411 C3orf67Q6ZVT6 689 aa12.35□□□□□ -0.43
DDB1-202ENST00000414411 IFNLR1Q8IU57 520 aaPredicted RBP12.35□□□□□ -0.43
DDB1-202ENST00000414411 RPAP2Q8IXW5 612 aaPredicted RBP12.35□□□□□ -0.43
DDB1-202ENST00000414411 ZBTB12Q9Y330 459 aaPredicted RBP12.35□□□□□ -0.43
DDB1-202ENST00000414411 LAMB2P55268 1798 aa12.35□□□□□ -0.43
DDB1-202ENST00000414411 NBR1Q14596 966 aa12.35□□□□□ -0.43
DDB1-202ENST00000414411 LMBR1LQ6UX01 489 aa12.35□□□□□ -0.43
DDB1-202ENST00000414411 BRIP1Q9BX63 1249 aa12.35□□□□□ -0.43
DDB1-202ENST00000414411 ANKRD31Q8N7Z5 1873 aa12.34□□□□□ -0.43
DDB1-202ENST00000414411 CTSWP56202 376 aa12.34□□□□□ -0.43
DDB1-202ENST00000414411 ST5P78524 1137 aa12.34□□□□□ -0.43
DDB1-202ENST00000414411 NLRP3Q96P20 1036 aa12.34□□□□□ -0.43
DDB1-202ENST00000414411 PNMA6EA0A0J9YXQ4 647 aa12.33□□□□□ -0.44
DDB1-202ENST00000414411 NPHP1O15259 732 aa12.33□□□□□ -0.44
DDB1-202ENST00000414411 POLD1P28340 1107 aa12.33□□□□□ -0.44
DDB1-202ENST00000414411 CRY2Q49AN0 593 aa12.33□□□□□ -0.44
DDB1-202ENST00000414411 SSH3Q8TE77 659 aa12.33□□□□□ -0.44
DDB1-202ENST00000414411 PDZRN3Q9UPQ7 1066 aa12.33□□□□□ -0.44
DDB1-202ENST00000414411 TNRC6CQ9HCJ0 1690 aaKnown RBP12.33□□□□□ -0.44
DDB1-202ENST00000414411 SPON1Q9HCB6 807 aa12.33□□□□□ -0.44
DDB1-202ENST00000414411 RTL9Q8NET4 1388 aa12.32□□□□□ -0.44
DDB1-202ENST00000414411 RFX5P48382 616 aaPredicted RBP12.32□□□□□ -0.44
DDB1-202ENST00000414411 HDAC1Q13547 482 aaPredicted RBP12.32□□□□□ -0.44
DDB1-202ENST00000414411 GREM2Q9H772 168 aa12.32□□□□□ -0.44
DDB1-202ENST00000414411 C10orf71Q711Q0 1435 aa12.31□□□□□ -0.44
DDB1-202ENST00000414411 KIF13BQ9NQT8 1826 aa12.31□□□□□ -0.44
DDB1-202ENST00000414411 SRGAP3O43295 1099 aa12.31□□□□□ -0.44
DDB1-202ENST00000414411 GOLGB1Q14789 3259 aaKnown RBP12.31□□□□□ -0.44
DDB1-202ENST00000414411 SRGNP10124 158 aa12.31□□□□□ -0.44
DDB1-202ENST00000414411 HOXA10P31260 410 aaPredicted RBP12.31□□□□□ -0.44
DDB1-202ENST00000414411 PDE6BP35913 854 aa12.31□□□□□ -0.44
DDB1-202ENST00000414411 CCDC152Q4G0S7 254 aa12.31□□□□□ -0.44
DDB1-202ENST00000414411 CCDC85AQ96PX6 553 aaPredicted RBP12.31□□□□□ -0.44
DDB1-202ENST00000414411 TAF1P21675 1872 aa12.3□□□□□ -0.44
DDB1-202ENST00000414411 ITGA6P23229 1130 aa12.29□□□□□ -0.44
DDB1-202ENST00000414411 PTPN12Q05209 780 aaKnown RBP12.29□□□□□ -0.44
DDB1-202ENST00000414411 COPRSQ9NQ92 184 aa12.29□□□□□ -0.44
DDB1-202ENST00000414411 SEC31BQ9NQW1 1179 aa12.29□□□□□ -0.44
DDB1-202ENST00000414411 HMMRO75330 724 aa12.29□□□□□ -0.44
DDB1-202ENST00000414411 IFIT5Q13325 482 aaKnown RBP12.29□□□□□ -0.44
DDB1-202ENST00000414411 CCDC57Q2TAC2 916 aa12.29□□□□□ -0.44
DDB1-202ENST00000414411 DCTPP1Q9H773 170 aa12.29□□□□□ -0.44
DDB1-202ENST00000414411 CHMP3Q9Y3E7 222 aa12.29□□□□□ -0.44
DDB1-202ENST00000414411 ANKRD18BA2A2Z9 1011 aa12.28□□□□□ -0.44
DDB1-202ENST00000414411 KLHDC4Q8TBB5 520 aa12.28□□□□□ -0.44
DDB1-202ENST00000414411 CRAMP1Q96RY5 1269 aa12.28□□□□□ -0.44
DDB1-202ENST00000414411 CD2APQ9Y5K6 639 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms