RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 TRAF5O00463 557 aa31.81■■■□□ 2.68
AC005540.1-201ENST00000413911 WDR43Q15061 677 aaKnown RBP eCLIP31.81■■■□□ 2.68
AC005540.1-201ENST00000413911 SUPT20HQ8NEM7 779 aa31.81■■■□□ 2.68
AC005540.1-201ENST00000413911 PLBD2Q8NHP8 589 aa31.81■■■□□ 2.68
AC005540.1-201ENST00000413911 ABT1Q9ULW3 272 aaKnown RBP31.81■■■□□ 2.68
AC005540.1-201ENST00000413911 KIAA2012Q0VF49 1180 aa31.8■■■□□ 2.68
AC005540.1-201ENST00000413911 ISCA1Q9BUE6 129 aa31.8■■■□□ 2.68
AC005540.1-201ENST00000413911 DUOX1Q9NRD9 1551 aa31.8■■■□□ 2.68
AC005540.1-201ENST00000413911 DDX60Q8IY21 1712 aaKnown RBP31.8■■■□□ 2.68
AC005540.1-201ENST00000413911 CST9Q5W186 159 aa31.79■■■□□ 2.68
AC005540.1-201ENST00000413911 ANKRD13DQ6ZTN6 518 aa31.79■■■□□ 2.68
AC005540.1-201ENST00000413911 COL4A1P02462 1669 aa31.79■■■□□ 2.68
AC005540.1-201ENST00000413911 WDR33Q9C0J8 1336 aaKnown RBP31.78■■■□□ 2.68
AC005540.1-201ENST00000413911 ATP5J2-PTCD1G3V325 749 aa31.78■■■□□ 2.68
AC005540.1-201ENST00000413911 HOXB7P09629 217 aa31.78■■■□□ 2.68
AC005540.1-201ENST00000413911 GMPSP49915 693 aaPredicted RBP31.78■■■□□ 2.68
AC005540.1-201ENST00000413911 FAM89AQ96GI7 184 aa31.78■■■□□ 2.68
AC005540.1-201ENST00000413911 PRDM10Q9NQV6 1147 aa31.78■■■□□ 2.68
AC005540.1-201ENST00000413911 ADARB2Q9NS39 739 aaKnown RBP31.78■■■□□ 2.68
AC005540.1-201ENST00000413911 CFAP44Q96MT7 982 aa31.77■■■□□ 2.68
AC005540.1-201ENST00000413911 RAD17O75943 681 aa31.76■■■□□ 2.67
AC005540.1-201ENST00000413911 CTCFP49711 727 aaPredicted RBP31.76■■■□□ 2.67
AC005540.1-201ENST00000413911 DUSP27Q5VZP5 1158 aa31.76■■■□□ 2.67
AC005540.1-201ENST00000413911 AIDAQ96BJ3 306 aa31.76■■■□□ 2.67
AC005540.1-201ENST00000413911 MBIPQ9NS73 344 aa31.76■■■□□ 2.67
AC005540.1-201ENST00000413911 DBF4Q9UBU7 674 aaPredicted RBP31.76■■■□□ 2.67
AC005540.1-201ENST00000413911 YDJCA8MPS7 323 aa31.75■■■□□ 2.67
AC005540.1-201ENST00000413911 CIAPIN1Q6FI81 312 aa31.75■■■□□ 2.67
AC005540.1-201ENST00000413911 CELF1Q92879 486 aaKnown RBP31.75■■■□□ 2.67
AC005540.1-201ENST00000413911 LRRC37AA6NMS7 1700 aa31.75■■■□□ 2.67
AC005540.1-201ENST00000413911 ZNF853P0CG23 659 aa31.73■■■□□ 2.67
AC005540.1-201ENST00000413911 LBX1P52954 281 aa31.73■■■□□ 2.67
AC005540.1-201ENST00000413911 HIRAP54198 1017 aaPredicted RBP31.73■■■□□ 2.67
AC005540.1-201ENST00000413911 SHTN1A0MZ66 631 aa31.72■■■□□ 2.67
AC005540.1-201ENST00000413911 SF3B3Q15393 1217 aaKnown RBP31.72■■■□□ 2.67
AC005540.1-201ENST00000413911 RTL5Q5HYW3 569 aaPredicted RBP31.72■■■□□ 2.67
AC005540.1-201ENST00000413911 TRPM7Q96QT4 1865 aa31.72■■■□□ 2.67
AC005540.1-201ENST00000413911 PRKRIP1Q9H875 184 aaPredicted RBP31.71■■■□□ 2.67
AC005540.1-201ENST00000413911 HYPKQ9NX55 129 aa31.71■■■□□ 2.67
AC005540.1-201ENST00000413911 HSPA8P11142 646 aaKnown RBP31.7■■■□□ 2.67
AC005540.1-201ENST00000413911 CYP4F22Q6NT55 531 aa31.7■■■□□ 2.67
AC005540.1-201ENST00000413911 TMC4Q7Z404 712 aa31.7■■■□□ 2.67
AC005540.1-201ENST00000413911 CAPNS2Q96L46 248 aa31.7■■■□□ 2.67
AC005540.1-201ENST00000413911 PGAP2Q9UHJ9 254 aa31.7■■■□□ 2.67
AC005540.1-201ENST00000413911 TRPM4Q8TD43 1214 aa31.69■■■□□ 2.66
AC005540.1-201ENST00000413911 GLIS2Q9BZE0 524 aaPredicted RBP31.69■■■□□ 2.66
AC005540.1-201ENST00000413911 THSD7BQ9C0I4 1608 aa31.68■■■□□ 2.66
AC005540.1-201ENST00000413911 TRIM28Q13263 835 aaKnown RBP31.68■■■□□ 2.66
AC005540.1-201ENST00000413911 TNIP1Q15025 636 aa31.68■■■□□ 2.66
AC005540.1-201ENST00000413911 BCL2L13Q9BXK5 485 aa31.68■■■□□ 2.66
AC005540.1-201ENST00000413911 PHAXQ9H814 394 aaKnown RBP31.68■■■□□ 2.66
AC005540.1-201ENST00000413911 TLL2Q9Y6L7 1015 aa31.68■■■□□ 2.66
AC005540.1-201ENST00000413911 APAF1O14727 1248 aa31.67■■■□□ 2.66
AC005540.1-201ENST00000413911 POLLQ9UGP5 575 aa31.67■■■□□ 2.66
AC005540.1-201ENST00000413911 NSFL1CQ9UNZ2 370 aaKnown RBP31.67■■■□□ 2.66
AC005540.1-201ENST00000413911 CDHR2Q9BYE9 1310 aa31.67■■■□□ 2.66
AC005540.1-201ENST00000413911 GPSM2P81274 684 aa31.66■■■□□ 2.66
AC005540.1-201ENST00000413911 MAP2K1Q02750 393 aaPredicted RBP31.66■■■□□ 2.66
AC005540.1-201ENST00000413911 PAXIP1Q6ZW49 1069 aaPredicted RBP31.66■■■□□ 2.66
AC005540.1-201ENST00000413911 CNOT7Q9UIV1 285 aaKnown RBP31.66■■■□□ 2.66
AC005540.1-201ENST00000413911 ZBTB12Q9Y330 459 aaPredicted RBP31.66■■■□□ 2.66
AC005540.1-201ENST00000413911 ELL2O00472 640 aaPredicted RBP31.65■■■□□ 2.66
AC005540.1-201ENST00000413911 IRS4O14654 1257 aaPredicted RBP31.65■■■□□ 2.66
AC005540.1-201ENST00000413911 GRM1Q13255 1194 aa31.65■■■□□ 2.66
AC005540.1-201ENST00000413911 CELF2O95319 508 aaKnown RBP31.64■■■□□ 2.66
AC005540.1-201ENST00000413911 WASHC4Q2M389 1173 aa31.64■■■□□ 2.66
AC005540.1-201ENST00000413911 GPR101Q96P66 508 aaPredicted RBP31.64■■■□□ 2.66
AC005540.1-201ENST00000413911 DBNDD1Q9H9R9 158 aa31.64■■■□□ 2.66
AC005540.1-201ENST00000413911 RIMBP2O15034 1052 aa31.63■■■□□ 2.65
AC005540.1-201ENST00000413911 KCNQ5Q9NR82 932 aa31.63■■■□□ 2.65
AC005540.1-201ENST00000413911 IFT57Q9NWB7 429 aa31.63■■■□□ 2.65
AC005540.1-201ENST00000413911 PSMD14O00487 310 aa31.62■■■□□ 2.65
AC005540.1-201ENST00000413911 RIC3Q7Z5B4 369 aa31.62■■■□□ 2.65
AC005540.1-201ENST00000413911 SAPCD2Q86UD0 394 aa31.62■■■□□ 2.65
AC005540.1-201ENST00000413911 MICALL2Q8IY33 904 aa31.62■■■□□ 2.65
AC005540.1-201ENST00000413911 ZC3H15Q8WU90 426 aaKnown RBP31.62■■■□□ 2.65
AC005540.1-201ENST00000413911 AOC2O75106 756 aa31.61■■■□□ 2.65
AC005540.1-201ENST00000413911 ECE1P42892 770 aa31.61■■■□□ 2.65
AC005540.1-201ENST00000413911 DLK2Q6UY11 383 aa31.61■■■□□ 2.65
AC005540.1-201ENST00000413911 C8orf58Q8NAV2 365 aa31.61■■■□□ 2.65
AC005540.1-201ENST00000413911 SEC31BQ9NQW1 1179 aa31.61■■■□□ 2.65
AC005540.1-201ENST00000413911 C6orf229H3BNL8 230 aa31.6■■■□□ 2.65
AC005540.1-201ENST00000413911 RPS8P62241 208 aaKnown RBP31.6■■■□□ 2.65
AC005540.1-201ENST00000413911 ZBTB38Q8NAP3 1195 aaPredicted RBP31.6■■■□□ 2.65
AC005540.1-201ENST00000413911 EGFRP00533 1210 aa31.59■■■□□ 2.65
AC005540.1-201ENST00000413911 DOK7Q18PE1 504 aa31.59■■■□□ 2.65
AC005540.1-201ENST00000413911 SAMD7Q7Z3H4 446 aa31.59■■■□□ 2.65
AC005540.1-201ENST00000413911 TBC1D16Q8TBP0 767 aa31.59■■■□□ 2.65
AC005540.1-201ENST00000413911 MYD88Q99836 296 aa31.59■■■□□ 2.65
AC005540.1-201ENST00000413911 RTL9Q8NET4 1388 aa31.58■■■□□ 2.65
AC005540.1-201ENST00000413911 GNAI1P63096 354 aa31.58■■■□□ 2.65
AC005540.1-201ENST00000413911 GOLGA2Q08379 1002 aa31.58■■■□□ 2.65
AC005540.1-201ENST00000413911 DPF2Q92785 391 aa31.58■■■□□ 2.65
AC005540.1-201ENST00000413911 JARID2Q92833 1246 aaPredicted RBP31.58■■■□□ 2.65
AC005540.1-201ENST00000413911 H7C1D1 291 aa31.57■■■□□ 2.64
AC005540.1-201ENST00000413911 ZNF408Q9H9D4 720 aa31.57■■■□□ 2.64
AC005540.1-201ENST00000413911 ECE2O60344 883 aa31.56■■■□□ 2.64
AC005540.1-201ENST00000413911 CDC37L1Q7L3B6 337 aa31.56■■■□□ 2.64
AC005540.1-201ENST00000413911 USP48Q86UV5 1035 aa31.55■■■□□ 2.64
AC005540.1-201ENST00000413911 TBC1D10BQ4KMP7 808 aaPredicted RBP31.54■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms