RNA–Protein interactions for RNA: ENST00000409870.1

C2orf88-204, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C2orf88, Length 1,441 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-204ENST00000409870 PDE8AO60658 829 aa32.39■■■□□ 2.78
C2orf88-204ENST00000409870 RASSF7Q02833 373 aa32.39■■■□□ 2.78
C2orf88-204ENST00000409870 ZNF622Q969S3 477 aaKnown RBP eCLIP32.39■■■□□ 2.78
C2orf88-204ENST00000409870 TIAM2Q8IVF5 1701 aa32.39■■■□□ 2.77
C2orf88-204ENST00000409870 HOXA10P31260 410 aaPredicted RBP32.37■■■□□ 2.77
C2orf88-204ENST00000409870 SF3B3Q15393 1217 aaKnown RBP32.37■■■□□ 2.77
C2orf88-204ENST00000409870 RPGRQ92834 1020 aaKnown RBP32.37■■■□□ 2.77
C2orf88-204ENST00000409870 PLA2G12BQ9BX93 195 aa32.37■■■□□ 2.77
C2orf88-204ENST00000409870 FTSJ3Q8IY81 847 aaKnown RBP32.36■■■□□ 2.77
C2orf88-204ENST00000409870 DZIP1LQ8IYY4 767 aaKnown RBP32.36■■■□□ 2.77
C2orf88-204ENST00000409870 CNKSR1Q969H4 720 aa32.35■■■□□ 2.77
C2orf88-204ENST00000409870 USP44Q9H0E7 712 aa32.35■■■□□ 2.77
C2orf88-204ENST00000409870 NBPF7P0C2Y1 421 aaPredicted RBP32.34■■■□□ 2.77
C2orf88-204ENST00000409870 CCDC88AQ3V6T2 1871 aa32.34■■■□□ 2.77
C2orf88-204ENST00000409870 CEP350Q5VT06 3117 aa32.34■■■□□ 2.77
C2orf88-204ENST00000409870 SLX4Q8IY92 1834 aa32.34■■■□□ 2.77
C2orf88-204ENST00000409870 RLBP1P12271 317 aa32.34■■■□□ 2.77
C2orf88-204ENST00000409870 CTSWP56202 376 aa32.34■■■□□ 2.77
C2orf88-204ENST00000409870 TMEM57Q8N5G2 664 aa32.34■■■□□ 2.77
C2orf88-204ENST00000409870 NMRK2Q9NPI5 230 aa32.34■■■□□ 2.77
C2orf88-204ENST00000409870 GOLGA6L2Q8N9W4 650 aaPredicted RBP32.33■■■□□ 2.77
C2orf88-204ENST00000409870 RBM17Q96I25 401 aaKnown RBP32.33■■■□□ 2.77
C2orf88-204ENST00000409870 CRAMP1Q96RY5 1269 aa32.33■■■□□ 2.77
C2orf88-204ENST00000409870 FER1L6Q2WGJ9 1857 aa32.33■■■□□ 2.77
C2orf88-204ENST00000409870 ZC3H4Q9UPT8 1303 aaKnown RBP32.32■■■□□ 2.76
C2orf88-204ENST00000409870 PLIN1O60240 522 aa32.31■■■□□ 2.76
C2orf88-204ENST00000409870 MS4A1P11836 297 aa32.31■■■□□ 2.76
C2orf88-204ENST00000409870 LMNB1P20700 586 aa32.31■■■□□ 2.76
C2orf88-204ENST00000409870 ALDH1B1P30837 517 aa32.31■■■□□ 2.76
C2orf88-204ENST00000409870 CCDC152Q4G0S7 254 aa32.31■■■□□ 2.76
C2orf88-204ENST00000409870 PRPF40BQ6NWY9 871 aaKnown RBP32.31■■■□□ 2.76
C2orf88-204ENST00000409870 KDM2BQ8NHM5 1336 aa32.3■■■□□ 2.76
C2orf88-204ENST00000409870 TAF1P21675 1872 aa32.3■■■□□ 2.76
C2orf88-204ENST00000409870 TTLL11Q8NHH1 800 aa32.3■■■□□ 2.76
C2orf88-204ENST00000409870 NFKBIEO00221 500 aa32.29■■■□□ 2.76
C2orf88-204ENST00000409870 DDX46Q7L014 1031 aaKnown RBP32.29■■■□□ 2.76
C2orf88-204ENST00000409870 SUCLG2Q96I99 432 aa32.29■■■□□ 2.76
C2orf88-204ENST00000409870 RTL9Q8NET4 1388 aa32.28■■■□□ 2.76
C2orf88-204ENST00000409870 HSPA6P17066 643 aa32.28■■■□□ 2.76
C2orf88-204ENST00000409870 PANK1Q8TE04 598 aa32.28■■■□□ 2.76
C2orf88-204ENST00000409870 FOXO4P98177 505 aa32.27■■■□□ 2.76
C2orf88-204ENST00000409870 KAZALD1Q96I82 304 aa32.27■■■□□ 2.76
C2orf88-204ENST00000409870 MEIS3Q99687 375 aa32.27■■■□□ 2.76
C2orf88-204ENST00000409870 COL4A1P02462 1669 aa32.27■■■□□ 2.76
C2orf88-204ENST00000409870 C21orf2O43822 256 aa32.26■■■□□ 2.76
C2orf88-204ENST00000409870 TOMM70O94826 608 aa32.26■■■□□ 2.76
C2orf88-204ENST00000409870 CSF1RP07333 972 aa32.26■■■□□ 2.76
C2orf88-204ENST00000409870 PRELPP51888 382 aa32.26■■■□□ 2.76
C2orf88-204ENST00000409870 EPHA10Q5JZY3 1008 aa32.26■■■□□ 2.76
C2orf88-204ENST00000409870 DICER1Q9UPY3 1922 aaKnown RBP32.26■■■□□ 2.76
C2orf88-204ENST00000409870 UBTFL1P0CB47 393 aaPredicted RBP32.26■■■□□ 2.75
C2orf88-204ENST00000409870 GRAPQ13588 217 aa32.26■■■□□ 2.75
C2orf88-204ENST00000409870 GRAPLQ8TC17 118 aaPredicted RBP32.26■■■□□ 2.75
C2orf88-204ENST00000409870 CCDC85AQ96PX6 553 aaPredicted RBP32.26■■■□□ 2.75
C2orf88-204ENST00000409870 ZNF219Q9P2Y4 722 aaPredicted RBP32.26■■■□□ 2.75
C2orf88-204ENST00000409870 ITPRIPQ8IWB1 547 aa32.25■■■□□ 2.75
C2orf88-204ENST00000409870 RRP1P56182 461 aaKnown RBP32.24■■■□□ 2.75
C2orf88-204ENST00000409870 PDE3AQ14432 1141 aa32.24■■■□□ 2.75
C2orf88-204ENST00000409870 GREM2Q9H772 168 aa32.24■■■□□ 2.75
C2orf88-204ENST00000409870 GNAI3P08754 354 aa32.23■■■□□ 2.75
C2orf88-204ENST00000409870 C7orf43Q8WVR3 580 aa32.23■■■□□ 2.75
C2orf88-204ENST00000409870 SEC31BQ9NQW1 1179 aa32.23■■■□□ 2.75
C2orf88-204ENST00000409870 FAM161AQ3B820 660 aa32.22■■■□□ 2.75
C2orf88-204ENST00000409870 RABL6Q3YEC7 729 aaPredicted RBP32.22■■■□□ 2.75
C2orf88-204ENST00000409870 LMBR1LQ6UX01 489 aa32.22■■■□□ 2.75
C2orf88-204ENST00000409870 BICC1Q9H694 974 aaKnown RBP32.22■■■□□ 2.75
C2orf88-204ENST00000409870 PPEF1O14829 653 aaPredicted RBP32.21■■■□□ 2.75
C2orf88-204ENST00000409870 CELF1Q92879 486 aaKnown RBP32.21■■■□□ 2.75
C2orf88-204ENST00000409870 HDAC5Q9UQL6 1122 aa32.21■■■□□ 2.75
C2orf88-204ENST00000409870 LRRC37AA6NMS7 1700 aa32.21■■■□□ 2.75
C2orf88-204ENST00000409870 BBOX1O75936 387 aa32.2■■■□□ 2.75
C2orf88-204ENST00000409870 C16orf71Q8IYS4 520 aaPredicted RBP32.2■■■□□ 2.75
C2orf88-204ENST00000409870 ANKRD44Q8N8A2 993 aa32.2■■■□□ 2.75
C2orf88-204ENST00000409870 LTBP3Q9NS15 1303 aa32.2■■■□□ 2.75
C2orf88-204ENST00000409870 MVPQ14764 893 aaKnown RBP32.19■■■□□ 2.74
C2orf88-204ENST00000409870 C20orf194Q5TEA3 1177 aa32.19■■■□□ 2.74
C2orf88-204ENST00000409870 SOGA3Q5TF21 947 aa32.19■■■□□ 2.74
C2orf88-204ENST00000409870 SPEF2Q9C093 1822 aa32.19■■■□□ 2.74
C2orf88-204ENST00000409870 CDC5LQ99459 802 aaKnown RBP32.18■■■□□ 2.74
C2orf88-204ENST00000409870 TAOK3Q9H2K8 898 aa32.18■■■□□ 2.74
C2orf88-204ENST00000409870 ITGA6P23229 1130 aa32.17■■■□□ 2.74
C2orf88-204ENST00000409870 TMC4Q7Z404 712 aa32.17■■■□□ 2.74
C2orf88-204ENST00000409870 RBM46Q8TBY0 533 aaKnown RBP32.17■■■□□ 2.74
C2orf88-204ENST00000409870 LRRFIP2Q9Y608 721 aaKnown RBP32.17■■■□□ 2.74
C2orf88-204ENST00000409870 SNED1Q8TER0 1413 aa32.17■■■□□ 2.74
C2orf88-204ENST00000409870 RPS8P62241 208 aaKnown RBP32.17■■■□□ 2.74
C2orf88-204ENST00000409870 RRAGCQ9HB90 399 aa32.17■■■□□ 2.74
C2orf88-204ENST00000409870 COG6Q9Y2V7 657 aa32.17■■■□□ 2.74
C2orf88-204ENST00000409870 CHMP3Q9Y3E7 222 aa32.17■■■□□ 2.74
C2orf88-204ENST00000409870 GLTPD2A6NH11 291 aa32.16■■■□□ 2.74
C2orf88-204ENST00000409870 ZBTB7BO15156 539 aaPredicted RBP32.16■■■□□ 2.74
C2orf88-204ENST00000409870 ATP6V0A2Q9Y487 856 aa32.16■■■□□ 2.74
C2orf88-204ENST00000409870 CCDC93Q567U6 631 aa32.15■■■□□ 2.74
C2orf88-204ENST00000409870 OLFM4Q6UX06 510 aa32.15■■■□□ 2.74
C2orf88-204ENST00000409870 SLC51AQ86UW1 340 aa32.15■■■□□ 2.74
C2orf88-204ENST00000409870 ANKRD18AQ8IVF6 992 aa32.15■■■□□ 2.74
C2orf88-204ENST00000409870 ANKRD18BA2A2Z9 1011 aa32.14■■■□□ 2.74
C2orf88-204ENST00000409870 IFIT5Q13325 482 aaKnown RBP32.14■■■□□ 2.74
C2orf88-204ENST00000409870 CC2D2BQ6DHV5 1058 aa32.14■■■□□ 2.74
C2orf88-204ENST00000409870 DDX19BQ9UMR2 479 aa32.14■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms