RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 ATP8B2P98198 1209 aa6.8□□□□□ -1.32
R3HDM1-202ENST00000409478 ANKRD1Q15327 319 aa6.8□□□□□ -1.32
R3HDM1-202ENST00000409478 GORABQ5T7V8 394 aa6.8□□□□□ -1.32
R3HDM1-202ENST00000409478 GGT6Q6P531 493 aa6.8□□□□□ -1.32
R3HDM1-202ENST00000409478 MSL3Q8N5Y2 521 aaKnown RBP6.8□□□□□ -1.32
R3HDM1-202ENST00000409478 DRC1Q96MC2 740 aa6.8□□□□□ -1.32
R3HDM1-202ENST00000409478 LARP6Q9BRS8 491 aaKnown RBP6.8□□□□□ -1.32
R3HDM1-202ENST00000409478 IL25Q9H293 177 aa6.8□□□□□ -1.32
R3HDM1-202ENST00000409478 ZCCHC17Q9NP64 241 aaKnown RBP6.8□□□□□ -1.32
R3HDM1-202ENST00000409478 CPP00450 1065 aa6.8□□□□□ -1.32
R3HDM1-202ENST00000409478 PSME1Q06323 249 aa6.8□□□□□ -1.32
R3HDM1-202ENST00000409478 ME3Q16798 604 aa6.8□□□□□ -1.32
R3HDM1-202ENST00000409478 CCDC34Q96HJ3 373 aa6.8□□□□□ -1.32
R3HDM1-202ENST00000409478 JAKMIP1Q96N16 626 aaKnown RBP6.8□□□□□ -1.32
R3HDM1-202ENST00000409478 ATP7AQ04656 1500 aa6.8□□□□□ -1.32
R3HDM1-202ENST00000409478 ARAP3Q8WWN8 1544 aa6.8□□□□□ -1.32
R3HDM1-202ENST00000409478 EIF3CLB5ME19 914 aaKnown RBP6.8□□□□□ -1.32
R3HDM1-202ENST00000409478 RAB11FIP3O75154 756 aa6.8□□□□□ -1.32
R3HDM1-202ENST00000409478 EIF3JO75822 258 aaKnown RBP6.8□□□□□ -1.32
R3HDM1-202ENST00000409478 FERMT3Q86UX7 667 aa6.8□□□□□ -1.32
R3HDM1-202ENST00000409478 EFCAB13Q8IY85 973 aa6.8□□□□□ -1.32
R3HDM1-202ENST00000409478 KCNB2Q92953 911 aa6.8□□□□□ -1.32
R3HDM1-202ENST00000409478 MPHOSPH8Q99549 860 aa6.8□□□□□ -1.32
R3HDM1-202ENST00000409478 EIF3CQ99613 913 aaKnown RBP6.8□□□□□ -1.32
R3HDM1-202ENST00000409478 URI1O94763 535 aaPredicted RBP6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 ZKSCAN1P17029 563 aaPredicted RBP6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 CORO7P57737 925 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 BRD3Q15059 726 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 MCTP2Q6DN12 878 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 FCHSD1Q86WN1 690 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 RABGGTAQ92696 567 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 CEP89Q96ST8 783 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 FUT8Q9BYC5 575 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 FAM107BQ9H098 131 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 CLTCQ00610 1675 aaKnown RBP6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 CCDC151A5D8V7 595 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 ZSCAN12O43309 604 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 PSMA5P28066 241 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 IL13P35225 146 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 GPATCH11Q8N954 259 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 PGBD1Q96JS3 809 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 CARD6Q9BX69 1037 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 TOMM22Q9NS69 142 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 SLC52A1Q9NWF4 448 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 CHD2O14647 1828 aaKnown RBP6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 GOLGA6L9A6NEM1 432 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 SLC4A2P04920 1241 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 GSCP56915 257 aaPredicted RBP6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 ST3GAL1Q11201 340 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 MMS22LQ6ZRQ5 1243 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 NBPF11Q86T75 865 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 RPAINQ86UA6 219 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 BPIFA3Q9BQP9 254 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 ZSCAN16Q9H4T2 348 aaPredicted RBP6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 PREX1Q8TCU6 1659 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 CHL1O00533 1208 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 ARMCX5Q6P1M9 558 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 SLC4A10Q6U841 1118 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 BANK1Q8NDB2 785 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 DONSONQ9NYP3 566 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 TFIP11Q9UBB9 837 aaKnown RBP6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 PARP3Q9Y6F1 533 aa6.79□□□□□ -1.32
R3HDM1-202ENST00000409478 POTEB2H3BUK9 544 aa6.78□□□□□ -1.32
R3HDM1-202ENST00000409478 MAP2K7O14733 419 aa6.78□□□□□ -1.32
R3HDM1-202ENST00000409478 KINO60870 393 aaKnown RBP6.78□□□□□ -1.32
R3HDM1-202ENST00000409478 CCDC73Q6ZRK6 1079 aa6.78□□□□□ -1.32
R3HDM1-202ENST00000409478 HNRNPLLQ8WVV9 542 aaKnown RBP6.78□□□□□ -1.32
R3HDM1-202ENST00000409478 GOLGA1Q92805 767 aa6.78□□□□□ -1.32
R3HDM1-202ENST00000409478 BCCIPQ9P287 314 aaKnown RBP eCLIP6.78□□□□□ -1.32
R3HDM1-202ENST00000409478 DLG5Q8TDM6 1919 aa6.78□□□□□ -1.32
R3HDM1-202ENST00000409478 SRGAP3O43295 1099 aa6.78□□□□□ -1.32
R3HDM1-202ENST00000409478 TUBB4BP68371 445 aa6.78□□□□□ -1.32
R3HDM1-202ENST00000409478 GNL2Q13823 731 aaKnown RBP6.78□□□□□ -1.32
R3HDM1-202ENST00000409478 LONRF2Q1L5Z9 754 aa6.78□□□□□ -1.32
R3HDM1-202ENST00000409478 FAM173BQ6P4H8 233 aa6.78□□□□□ -1.32
R3HDM1-202ENST00000409478 RSRC2Q7L4I2 434 aaKnown RBP6.78□□□□□ -1.32
R3HDM1-202ENST00000409478 TMC6Q7Z403 805 aa6.78□□□□□ -1.32
R3HDM1-202ENST00000409478 AOPEPQ8N6M6 819 aa6.78□□□□□ -1.32
R3HDM1-202ENST00000409478 SOS1Q07889 1333 aaPredicted RBP6.78□□□□□ -1.32
R3HDM1-202ENST00000409478 NEXMIFQ5QGS0 1516 aa6.78□□□□□ -1.32
R3HDM1-202ENST00000409478 CPA1P15085 419 aa6.78□□□□□ -1.32
R3HDM1-202ENST00000409478 USP8P40818 1118 aa6.78□□□□□ -1.32
R3HDM1-202ENST00000409478 TRIM65Q6PJ69 517 aa6.78□□□□□ -1.32
R3HDM1-202ENST00000409478 HDXQ7Z353 690 aa6.78□□□□□ -1.32
R3HDM1-202ENST00000409478 AFAP1Q8N556 730 aa6.78□□□□□ -1.32
R3HDM1-202ENST00000409478 NECAB1Q8N987 351 aa6.78□□□□□ -1.32
R3HDM1-202ENST00000409478 PI4K2BQ8TCG2 481 aa6.78□□□□□ -1.32
R3HDM1-202ENST00000409478 PRAM1Q96QH2 718 aa6.78□□□□□ -1.32
R3HDM1-202ENST00000409478 ALDH8A1Q9H2A2 487 aaPredicted RBP6.78□□□□□ -1.32
R3HDM1-202ENST00000409478 CXorf56Q9H5V9 222 aa6.78□□□□□ -1.32
R3HDM1-202ENST00000409478 VPS18Q9P253 973 aa6.78□□□□□ -1.32
R3HDM1-202ENST00000409478 TPCN1Q9ULQ1 816 aa6.78□□□□□ -1.32
R3HDM1-202ENST00000409478 FAM83GA6ND36 823 aa6.77□□□□□ -1.33
R3HDM1-202ENST00000409478 TXLNAP40222 546 aa6.77□□□□□ -1.33
R3HDM1-202ENST00000409478 PPP2R3AQ06190 1150 aa6.77□□□□□ -1.33
R3HDM1-202ENST00000409478 TSGA10IPQ3SY00 556 aa6.77□□□□□ -1.33
R3HDM1-202ENST00000409478 CWC27Q6UX04 472 aaKnown RBP6.77□□□□□ -1.33
R3HDM1-202ENST00000409478 PARD6BQ9BYG5 372 aa6.77□□□□□ -1.33
R3HDM1-202ENST00000409478 PNMA6EA0A0J9YXQ4 647 aa6.77□□□□□ -1.33
R3HDM1-202ENST00000409478 CCDC196A0A1B0GTZ2 297 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms