RNA–Protein interactions for RNA: ENST00000406090.1

AC009494.1-201, humanhuman

BASIC

Gene AC009494.1, Length 455 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009494.1-201ENST00000406090 CHRNA5P30532 468 aa12.63□□□□□ -0.39
AC009494.1-201ENST00000406090 SF3B3Q15393 1217 aaKnown RBP12.63□□□□□ -0.39
AC009494.1-201ENST00000406090 C3orf67Q6ZVT6 689 aa12.63□□□□□ -0.39
AC009494.1-201ENST00000406090 MASTLQ96GX5 879 aa12.63□□□□□ -0.39
AC009494.1-201ENST00000406090 BICC1Q9H694 974 aaKnown RBP12.63□□□□□ -0.39
AC009494.1-201ENST00000406090 DLEC1Q9Y238 1755 aa12.63□□□□□ -0.39
AC009494.1-201ENST00000406090 RTL9Q8NET4 1388 aa12.62□□□□□ -0.39
AC009494.1-201ENST00000406090 A0A0G2JLW4 131 aa12.62□□□□□ -0.39
AC009494.1-201ENST00000406090 FOXO4P98177 505 aa12.62□□□□□ -0.39
AC009494.1-201ENST00000406090 STYK1Q6J9G0 422 aa12.62□□□□□ -0.39
AC009494.1-201ENST00000406090 DDX46Q7L014 1031 aaKnown RBP12.62□□□□□ -0.39
AC009494.1-201ENST00000406090 NLGN2Q8NFZ4 835 aa12.62□□□□□ -0.39
AC009494.1-201ENST00000406090 ZNF622Q969S3 477 aaKnown RBP eCLIP12.62□□□□□ -0.39
AC009494.1-201ENST00000406090 RBM17Q96I25 401 aaKnown RBP12.62□□□□□ -0.39
AC009494.1-201ENST00000406090 LRRFIP2Q9Y608 721 aaKnown RBP12.62□□□□□ -0.39
AC009494.1-201ENST00000406090 CSF1RP07333 972 aa12.61□□□□□ -0.39
AC009494.1-201ENST00000406090 ALDH1B1P30837 517 aa12.61□□□□□ -0.39
AC009494.1-201ENST00000406090 HOXA10P31260 410 aaPredicted RBP12.61□□□□□ -0.39
AC009494.1-201ENST00000406090 RABL6Q3YEC7 729 aaPredicted RBP12.61□□□□□ -0.39
AC009494.1-201ENST00000406090 EPHA10Q5JZY3 1008 aa12.61□□□□□ -0.39
AC009494.1-201ENST00000406090 LMBR1LQ6UX01 489 aa12.61□□□□□ -0.39
AC009494.1-201ENST00000406090 TTLL11Q8NHH1 800 aa12.61□□□□□ -0.39
AC009494.1-201ENST00000406090 KAZALD1Q96I82 304 aa12.61□□□□□ -0.39
AC009494.1-201ENST00000406090 CCDC85AQ96PX6 553 aaPredicted RBP12.61□□□□□ -0.39
AC009494.1-201ENST00000406090 CRBNQ96SW2 442 aa12.61□□□□□ -0.39
AC009494.1-201ENST00000406090 PIM2Q9P1W9 311 aa12.61□□□□□ -0.39
AC009494.1-201ENST00000406090 CHMP3Q9Y3E7 222 aa12.61□□□□□ -0.39
AC009494.1-201ENST00000406090 CCDC57Q2TAC2 916 aa12.6□□□□□ -0.39
AC009494.1-201ENST00000406090 FAM161AQ3B820 660 aa12.6□□□□□ -0.39
AC009494.1-201ENST00000406090 CNKSR1Q969H4 720 aa12.6□□□□□ -0.39
AC009494.1-201ENST00000406090 CRAMP1Q96RY5 1269 aa12.6□□□□□ -0.39
AC009494.1-201ENST00000406090 CDC5LQ99459 802 aaKnown RBP12.6□□□□□ -0.39
AC009494.1-201ENST00000406090 GREM2Q9H772 168 aa12.6□□□□□ -0.39
AC009494.1-201ENST00000406090 ZBTB40Q9NUA8 1239 aa12.6□□□□□ -0.39
AC009494.1-201ENST00000406090 KCNA3P22001 575 aa12.59□□□□□ -0.39
AC009494.1-201ENST00000406090 ITGA6P23229 1130 aa12.59□□□□□ -0.39
AC009494.1-201ENST00000406090 IFIT5Q13325 482 aaKnown RBP12.59□□□□□ -0.39
AC009494.1-201ENST00000406090 GRAPQ13588 217 aa12.59□□□□□ -0.39
AC009494.1-201ENST00000406090 TTLL6Q8N841 843 aa12.59□□□□□ -0.39
AC009494.1-201ENST00000406090 ANKRD44Q8N8A2 993 aa12.59□□□□□ -0.39
AC009494.1-201ENST00000406090 GRAPLQ8TC17 118 aaPredicted RBP12.59□□□□□ -0.39
AC009494.1-201ENST00000406090 C1orf115Q9H7X2 142 aa12.59□□□□□ -0.39
AC009494.1-201ENST00000406090 ANKRD18BA2A2Z9 1011 aa12.58□□□□□ -0.4
AC009494.1-201ENST00000406090 BRCA1P38398 1863 aaKnown RBP12.58□□□□□ -0.4
AC009494.1-201ENST00000406090 MTX1Q13505 466 aa12.58□□□□□ -0.4
AC009494.1-201ENST00000406090 DALRD3Q5D0E6 543 aaKnown RBP12.58□□□□□ -0.4
AC009494.1-201ENST00000406090 TAF7LQ5H9L4 462 aa12.58□□□□□ -0.4
AC009494.1-201ENST00000406090 PRPF40BQ6NWY9 871 aaKnown RBP12.58□□□□□ -0.4
AC009494.1-201ENST00000406090 SEC31BQ9NQW1 1179 aa12.58□□□□□ -0.4
AC009494.1-201ENST00000406090 PPEF1O14829 653 aaPredicted RBP12.57□□□□□ -0.4
AC009494.1-201ENST00000406090 BBOX1O75936 387 aa12.57□□□□□ -0.4
AC009494.1-201ENST00000406090 NEFLP07196 543 aa12.57□□□□□ -0.4
AC009494.1-201ENST00000406090 IRX6P78412 446 aaPredicted RBP12.57□□□□□ -0.4
AC009494.1-201ENST00000406090 AAMPQ13685 434 aa12.57□□□□□ -0.4
AC009494.1-201ENST00000406090 GPR162Q16538 588 aa12.57□□□□□ -0.4
AC009494.1-201ENST00000406090 TMC4Q7Z404 712 aa12.57□□□□□ -0.4
AC009494.1-201ENST00000406090 ANKRD18AQ8IVF6 992 aa12.57□□□□□ -0.4
AC009494.1-201ENST00000406090 TMX4Q9H1E5 349 aaPredicted RBP12.57□□□□□ -0.4
AC009494.1-201ENST00000406090 WWC3Q9ULE0 1092 aa12.57□□□□□ -0.4
AC009494.1-201ENST00000406090 BCS1LQ9Y276 419 aa12.57□□□□□ -0.4
AC009494.1-201ENST00000406090 CACNA1SQ13698 1873 aa12.57□□□□□ -0.4
AC009494.1-201ENST00000406090 SRGAP3O43295 1099 aa12.56□□□□□ -0.4
AC009494.1-201ENST00000406090 IGHMBP2P38935 993 aaKnown RBP12.56□□□□□ -0.4
AC009494.1-201ENST00000406090 RPS8P62241 208 aaKnown RBP12.56□□□□□ -0.4
AC009494.1-201ENST00000406090 PELP1Q8IZL8 1130 aaKnown RBP12.56□□□□□ -0.4
AC009494.1-201ENST00000406090 CELF1Q92879 486 aaKnown RBP12.56□□□□□ -0.4
AC009494.1-201ENST00000406090 CEP85Q6P2H3 762 aa12.55□□□□□ -0.4
AC009494.1-201ENST00000406090 EXOC6Q8TAG9 804 aa12.55□□□□□ -0.4
AC009494.1-201ENST00000406090 MPHOSPH8Q99549 860 aa12.55□□□□□ -0.4
AC009494.1-201ENST00000406090 SLX4Q8IY92 1834 aa12.54□□□□□ -0.4
AC009494.1-201ENST00000406090 PNMA6EA0A0J9YXQ4 647 aa12.54□□□□□ -0.4
AC009494.1-201ENST00000406090 HMMRO75330 724 aa12.54□□□□□ -0.4
AC009494.1-201ENST00000406090 ATP8B2P98198 1209 aa12.54□□□□□ -0.4
AC009494.1-201ENST00000406090 SOGA3Q5TF21 947 aa12.54□□□□□ -0.4
AC009494.1-201ENST00000406090 CC2D2BQ6DHV5 1058 aa12.54□□□□□ -0.4
AC009494.1-201ENST00000406090 RPAP2Q8IXW5 612 aaPredicted RBP12.54□□□□□ -0.4
AC009494.1-201ENST00000406090 CNNM1Q9NRU3 951 aa12.54□□□□□ -0.4
AC009494.1-201ENST00000406090 ZNF219Q9P2Y4 722 aaPredicted RBP12.54□□□□□ -0.4
AC009494.1-201ENST00000406090 ATP6V0A2Q9Y487 856 aa12.54□□□□□ -0.4
AC009494.1-201ENST00000406090 COL4A1P02462 1669 aa12.54□□□□□ -0.4
AC009494.1-201ENST00000406090 SPEF2Q9C093 1822 aa12.53□□□□□ -0.4
AC009494.1-201ENST00000406090 ARFGEF1Q9Y6D6 1849 aa12.53□□□□□ -0.4
AC009494.1-201ENST00000406090 TAF1P21675 1872 aa12.53□□□□□ -0.4
AC009494.1-201ENST00000406090 C21orf2O43822 256 aa12.53□□□□□ -0.4
AC009494.1-201ENST00000406090 CCDC93Q567U6 631 aa12.53□□□□□ -0.4
AC009494.1-201ENST00000406090 LDHAL6AQ6ZMR3 332 aa12.53□□□□□ -0.4
AC009494.1-201ENST00000406090 SP8Q8IXZ3 490 aa12.53□□□□□ -0.4
AC009494.1-201ENST00000406090 ZNF784Q8NCA9 323 aaPredicted RBP12.53□□□□□ -0.4
AC009494.1-201ENST00000406090 ZNF594Q96JF6 807 aaPredicted RBP12.53□□□□□ -0.4
AC009494.1-201ENST00000406090 BSDC1Q9NW68 430 aaPredicted RBP12.53□□□□□ -0.4
AC009494.1-201ENST00000406090 LRRC37AA6NMS7 1700 aa12.53□□□□□ -0.4
AC009494.1-201ENST00000406090 RFX5P48382 616 aaPredicted RBP12.52□□□□□ -0.41
AC009494.1-201ENST00000406090 PTPN12Q05209 780 aaKnown RBP12.52□□□□□ -0.41
AC009494.1-201ENST00000406090 POLA2Q14181 598 aa12.52□□□□□ -0.41
AC009494.1-201ENST00000406090 GRIPAP1Q4V328 841 aa12.52□□□□□ -0.41
AC009494.1-201ENST00000406090 KLHDC4Q8TBB5 520 aa12.52□□□□□ -0.41
AC009494.1-201ENST00000406090 SSH3Q8TE77 659 aa12.52□□□□□ -0.41
AC009494.1-201ENST00000406090 C7orf43Q8WVR3 580 aa12.52□□□□□ -0.41
AC009494.1-201ENST00000406090 COPRSQ9NQ92 184 aa12.52□□□□□ -0.41
AC009494.1-201ENST00000406090 FBXO3Q9UK99 471 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms