RNA–Protein interactions for RNA: ENST00000405557.5

POLR2F-202, Transcript of RNA polymerase II subunit F, humanhuman

TSL 5 BASIC

Gene POLR2F, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-202ENST00000405557 FTSJ3Q8IY81 847 aaKnown RBP16.65■□□□□ 0.26
POLR2F-202ENST00000405557 TTLL11Q8NHH1 800 aa16.65■□□□□ 0.26
POLR2F-202ENST00000405557 PIM2Q9P1W9 311 aa16.65■□□□□ 0.26
POLR2F-202ENST00000405557 WWC3Q9ULE0 1092 aa16.65■□□□□ 0.26
POLR2F-202ENST00000405557 PDE3AQ14432 1141 aa16.64■□□□□ 0.25
POLR2F-202ENST00000405557 ZNF622Q969S3 477 aaKnown RBP eCLIP16.64■□□□□ 0.252e-14■□□□□ 10.5
POLR2F-202ENST00000405557 ZBTB7BO15156 539 aaPredicted RBP16.63■□□□□ 0.25
POLR2F-202ENST00000405557 MS4A1P11836 297 aa16.63■□□□□ 0.25
POLR2F-202ENST00000405557 HSP90B1P14625 803 aaKnown RBP16.63■□□□□ 0.25
POLR2F-202ENST00000405557 YBX3P16989 372 aaKnown RBP eCLIP16.63■□□□□ 0.253e-11■■■■□ 19.7
POLR2F-202ENST00000405557 ANKRD44Q8N8A2 993 aa16.63■□□□□ 0.25
POLR2F-202ENST00000405557 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.63■□□□□ 0.25
POLR2F-202ENST00000405557 RPGRQ92834 1020 aaKnown RBP16.63■□□□□ 0.25
POLR2F-202ENST00000405557 CRAMP1Q96RY5 1269 aa16.63■□□□□ 0.25
POLR2F-202ENST00000405557 SPEF2Q9C093 1822 aa16.62■□□□□ 0.25
POLR2F-202ENST00000405557 MVPQ14764 893 aaKnown RBP16.62■□□□□ 0.25
POLR2F-202ENST00000405557 RABL6Q3YEC7 729 aaPredicted RBP16.62■□□□□ 0.25
POLR2F-202ENST00000405557 SLC51AQ86UW1 340 aa16.62■□□□□ 0.25
POLR2F-202ENST00000405557 ITPRIPQ8IWB1 547 aa16.62■□□□□ 0.25
POLR2F-202ENST00000405557 TTLL6Q8N841 843 aa16.62■□□□□ 0.25
POLR2F-202ENST00000405557 C7orf43Q8WVR3 580 aa16.62■□□□□ 0.25
POLR2F-202ENST00000405557 CNKSR1Q969H4 720 aa16.62■□□□□ 0.25
POLR2F-202ENST00000405557 RBM17Q96I25 401 aaKnown RBP16.62■□□□□ 0.25
POLR2F-202ENST00000405557 CCDC85AQ96PX6 553 aaPredicted RBP16.62■□□□□ 0.25
POLR2F-202ENST00000405557 BICC1Q9H694 974 aaKnown RBP16.62■□□□□ 0.25
POLR2F-202ENST00000405557 GREM2Q9H772 168 aa16.62■□□□□ 0.25
POLR2F-202ENST00000405557 SEC31BQ9NQW1 1179 aa16.62■□□□□ 0.25
POLR2F-202ENST00000405557 COG6Q9Y2V7 657 aa16.62■□□□□ 0.25
POLR2F-202ENST00000405557 RTL9Q8NET4 1388 aa16.62■□□□□ 0.25
POLR2F-202ENST00000405557 UBTFL1P0CB47 393 aaPredicted RBP16.61■□□□□ 0.25
POLR2F-202ENST00000405557 CCDC152Q4G0S7 254 aa16.61■□□□□ 0.25
POLR2F-202ENST00000405557 DALRD3Q5D0E6 543 aaKnown RBP16.61■□□□□ 0.25
POLR2F-202ENST00000405557 PRPF40BQ6NWY9 871 aaKnown RBP16.61■□□□□ 0.25
POLR2F-202ENST00000405557 LMBR1LQ6UX01 489 aa16.61■□□□□ 0.25
POLR2F-202ENST00000405557 SUPT16HQ9Y5B9 1047 aaKnown RBP16.61■□□□□ 0.25
POLR2F-202ENST00000405557 ALDH1B1P30837 517 aa16.6■□□□□ 0.25
POLR2F-202ENST00000405557 GRAPQ13588 217 aa16.6■□□□□ 0.25
POLR2F-202ENST00000405557 FAM161AQ3B820 660 aa16.6■□□□□ 0.25
POLR2F-202ENST00000405557 GRAPLQ8TC17 118 aaPredicted RBP16.6■□□□□ 0.25
POLR2F-202ENST00000405557 CELF1Q92879 486 aaKnown RBP16.6■□□□□ 0.25
POLR2F-202ENST00000405557 BCS1LQ9Y276 419 aa16.6■□□□□ 0.25
POLR2F-202ENST00000405557 LRRC37AA6NMS7 1700 aa16.59■□□□□ 0.25
POLR2F-202ENST00000405557 GNAI3P08754 354 aa16.59■□□□□ 0.25
POLR2F-202ENST00000405557 DDX46Q7L014 1031 aaKnown RBP16.59■□□□□ 0.25
POLR2F-202ENST00000405557 LRRFIP2Q9Y608 721 aaKnown RBP16.59■□□□□ 0.25
POLR2F-202ENST00000405557 FER1L6Q2WGJ9 1857 aa16.59■□□□□ 0.25
POLR2F-202ENST00000405557 OLFM4Q6UX06 510 aa16.58■□□□□ 0.24
POLR2F-202ENST00000405557 SNED1Q8TER0 1413 aa16.58■□□□□ 0.24
POLR2F-202ENST00000405557 C21orf2O43822 256 aa16.57■□□□□ 0.24
POLR2F-202ENST00000405557 BBOX1O75936 387 aa16.57■□□□□ 0.24
POLR2F-202ENST00000405557 ITGA6P23229 1130 aa16.57■□□□□ 0.24
POLR2F-202ENST00000405557 RPS8P62241 208 aaKnown RBP16.57■□□□□ 0.24
POLR2F-202ENST00000405557 UTRNP46939 3433 aa16.57■□□□□ 0.24
POLR2F-202ENST00000405557 PPEF1O14829 653 aaPredicted RBP16.56■□□□□ 0.24
POLR2F-202ENST00000405557 GNAI2P04899 355 aa16.56■□□□□ 0.24
POLR2F-202ENST00000405557 GPR162Q16538 588 aa16.56■□□□□ 0.24
POLR2F-202ENST00000405557 PELP1Q8IZL8 1130 aaKnown RBP16.56■□□□□ 0.24
POLR2F-202ENST00000405557 ZBTB40Q9NUA8 1239 aa16.56■□□□□ 0.24
POLR2F-202ENST00000405557 ZNF219Q9P2Y4 722 aaPredicted RBP16.56■□□□□ 0.24
POLR2F-202ENST00000405557 DDX19BQ9UMR2 479 aa16.56■□□□□ 0.24
POLR2F-202ENST00000405557 A0A1B0GUL6 1792 aa16.56■□□□□ 0.24
POLR2F-202ENST00000405557 LTBP1Q14766 1721 aa16.56■□□□□ 0.24
POLR2F-202ENST00000405557 RFX5P48382 616 aaPredicted RBP16.55■□□□□ 0.24
POLR2F-202ENST00000405557 C1orf115Q9H7X2 142 aa16.55■□□□□ 0.24
POLR2F-202ENST00000405557 ATP6V0A2Q9Y487 856 aa16.55■□□□□ 0.24
POLR2F-202ENST00000405557 SBF1O95248 1867 aa16.54■□□□□ 0.24
POLR2F-202ENST00000405557 ANKRD18BA2A2Z9 1011 aa16.54■□□□□ 0.24
POLR2F-202ENST00000405557 IFIT5Q13325 482 aaKnown RBP16.54■□□□□ 0.24
POLR2F-202ENST00000405557 MTX1Q13505 466 aa16.54■□□□□ 0.24
POLR2F-202ENST00000405557 SP8Q8IXZ3 490 aa16.54■□□□□ 0.24
POLR2F-202ENST00000405557 ZNF594Q96JF6 807 aaPredicted RBP16.54■□□□□ 0.24
POLR2F-202ENST00000405557 CDC5LQ99459 802 aaKnown RBP16.54■□□□□ 0.24
POLR2F-202ENST00000405557 HDAC5Q9UQL6 1122 aa16.54■□□□□ 0.24
POLR2F-202ENST00000405557 CHMP3Q9Y3E7 222 aa16.54■□□□□ 0.24
POLR2F-202ENST00000405557 CCDC88AQ3V6T2 1871 aa16.53■□□□□ 0.24
POLR2F-202ENST00000405557 CCDC57Q2TAC2 916 aa16.53■□□□□ 0.24
POLR2F-202ENST00000405557 ANKRD18AQ8IVF6 992 aa16.53■□□□□ 0.24
POLR2F-202ENST00000405557 CRBNQ96SW2 442 aa16.53■□□□□ 0.24
POLR2F-202ENST00000405557 PNMA6EA0A0J9YXQ4 647 aa16.52■□□□□ 0.24
POLR2F-202ENST00000405557 TMC4Q7Z404 712 aa16.52■□□□□ 0.24
POLR2F-202ENST00000405557 KLHDC4Q8TBB5 520 aa16.52■□□□□ 0.24
POLR2F-202ENST00000405557 BSDC1Q9NW68 430 aaPredicted RBP16.52■□□□□ 0.24
POLR2F-202ENST00000405557 DUOX1Q9NRD9 1551 aa16.51■□□□□ 0.23
POLR2F-202ENST00000405557 NFKBIEO00221 500 aa16.51■□□□□ 0.23
POLR2F-202ENST00000405557 PRELPP51888 382 aa16.51■□□□□ 0.23
POLR2F-202ENST00000405557 PTPN12Q05209 780 aaKnown RBP16.51■□□□□ 0.23
POLR2F-202ENST00000405557 CCDC93Q567U6 631 aa16.51■□□□□ 0.23
POLR2F-202ENST00000405557 GRIN3BO60391 1043 aa16.5■□□□□ 0.23
POLR2F-202ENST00000405557 IGHMBP2P38935 993 aaKnown RBP16.5■□□□□ 0.23
POLR2F-202ENST00000405557 ATP8B2P98198 1209 aa16.5■□□□□ 0.23
POLR2F-202ENST00000405557 POLA2Q14181 598 aa16.5■□□□□ 0.23
POLR2F-202ENST00000405557 SOGA3Q5TF21 947 aa16.5■□□□□ 0.23
POLR2F-202ENST00000405557 CC2D2BQ6DHV5 1058 aa16.5■□□□□ 0.23
POLR2F-202ENST00000405557 CEP85Q6P2H3 762 aa16.5■□□□□ 0.23
POLR2F-202ENST00000405557 ARHGAP27Q6ZUM4 889 aa16.5■□□□□ 0.23
POLR2F-202ENST00000405557 PUS3Q9BZE2 481 aaKnown RBP16.5■□□□□ 0.23
POLR2F-202ENST00000405557 MINPP1Q9UNW1 487 aa16.5■□□□□ 0.23
POLR2F-202ENST00000405557 SRGAP3O43295 1099 aa16.49■□□□□ 0.23
POLR2F-202ENST00000405557 GPSM2P81274 684 aa16.49■□□□□ 0.23
POLR2F-202ENST00000405557 RASSF7Q02833 373 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms