RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 IQCA1LA6NCM1 817 aa17.08■□□□□ 0.32
SDF4-203ENST00000403997 PPIP5K2O43314 1243 aa17.08■□□□□ 0.32
SDF4-203ENST00000403997 HSP90B1P14625 803 aaKnown RBP17.08■□□□□ 0.32
SDF4-203ENST00000403997 EIF6P56537 245 aaKnown RBP17.08■□□□□ 0.32
SDF4-203ENST00000403997 DPP8Q6V1X1 898 aaPredicted RBP17.08■□□□□ 0.32
SDF4-203ENST00000403997 G2E3Q7L622 706 aa17.08■□□□□ 0.32
SDF4-203ENST00000403997 SUPT20HQ8NEM7 779 aa17.08■□□□□ 0.32
SDF4-203ENST00000403997 JARID2Q92833 1246 aaPredicted RBP17.08■□□□□ 0.32
SDF4-203ENST00000403997 L3MBTL3Q96JM7 780 aaPredicted RBP17.08■□□□□ 0.32
SDF4-203ENST00000403997 VAMP4O75379 141 aa17.07■□□□□ 0.32
SDF4-203ENST00000403997 PCCAP05165 728 aaPredicted RBP17.07■□□□□ 0.32
SDF4-203ENST00000403997 EXOSC9Q06265 439 aaKnown RBP17.07■□□□□ 0.32
SDF4-203ENST00000403997 AOC3Q16853 763 aa17.07■□□□□ 0.32
SDF4-203ENST00000403997 TMC4Q7Z404 712 aa17.07■□□□□ 0.32
SDF4-203ENST00000403997 NIM1KQ8IY84 436 aa17.07■□□□□ 0.32
SDF4-203ENST00000403997 NEXNQ0ZGT2 675 aa17.06■□□□□ 0.32
SDF4-203ENST00000403997 GPC2Q8N158 579 aa17.06■□□□□ 0.32
SDF4-203ENST00000403997 CELF1Q92879 486 aaKnown RBP17.06■□□□□ 0.32
SDF4-203ENST00000403997 RTFDC1Q9BY42 306 aaPredicted RBP17.06■□□□□ 0.32
SDF4-203ENST00000403997 VPS33BQ9H267 617 aa17.06■□□□□ 0.32
SDF4-203ENST00000403997 TAF1DQ9H5J8 278 aaPredicted RBP17.06■□□□□ 0.32
SDF4-203ENST00000403997 MYH16Q9H6N6 1097 aa17.06■□□□□ 0.32
SDF4-203ENST00000403997 SPINK5Q9NQ38 1064 aaPredicted RBP17.06■□□□□ 0.32
SDF4-203ENST00000403997 GJA3Q9Y6H8 435 aa17.06■□□□□ 0.32
SDF4-203ENST00000403997 LAMB2P55268 1798 aa17.05■□□□□ 0.32
SDF4-203ENST00000403997 PDE8AO60658 829 aa17.05■□□□□ 0.32
SDF4-203ENST00000403997 HTRA3P83110 453 aa17.05■□□□□ 0.32
SDF4-203ENST00000403997 HACL1Q9UJ83 578 aa17.05■□□□□ 0.32
SDF4-203ENST00000403997 IGKV5-2P06315 115 aa17.04■□□□□ 0.32
SDF4-203ENST00000403997 POTEIP0CG38 1075 aa17.04■□□□□ 0.32
SDF4-203ENST00000403997 POTEJP0CG39 1038 aa17.04■□□□□ 0.32
SDF4-203ENST00000403997 RPS8P62241 208 aaKnown RBP17.04■□□□□ 0.32
SDF4-203ENST00000403997 FLIIQ13045 1269 aa17.04■□□□□ 0.32
SDF4-203ENST00000403997 EAPPQ56P03 285 aaPredicted RBP17.04■□□□□ 0.32
SDF4-203ENST00000403997 CHADLQ6NUI6 762 aa17.04■□□□□ 0.32
SDF4-203ENST00000403997 EPHX2P34913 555 aa17.03■□□□□ 0.32
SDF4-203ENST00000403997 FKBP5Q13451 457 aaPredicted RBP17.03■□□□□ 0.32
SDF4-203ENST00000403997 CCDC152Q4G0S7 254 aa17.03■□□□□ 0.32
SDF4-203ENST00000403997 COL13A1Q5TAT6 717 aaPredicted RBP17.03■□□□□ 0.32
SDF4-203ENST00000403997 DNAJC5GQ8N7S2 189 aa17.03■□□□□ 0.32
SDF4-203ENST00000403997 SEC31BQ9NQW1 1179 aa17.03■□□□□ 0.32
SDF4-203ENST00000403997 NSFL1CQ9UNZ2 370 aaKnown RBP17.03■□□□□ 0.32
SDF4-203ENST00000403997 TAF1P21675 1872 aa17.03■□□□□ 0.32
SDF4-203ENST00000403997 DDX60Q8IY21 1712 aaKnown RBP17.02■□□□□ 0.32
SDF4-203ENST00000403997 COL4A5P29400 1685 aa17.02■□□□□ 0.32
SDF4-203ENST00000403997 SLC34A2O95436 690 aa17.02■□□□□ 0.32
SDF4-203ENST00000403997 CWF19L2Q2TBE0 894 aaKnown RBP17.02■□□□□ 0.32
SDF4-203ENST00000403997 LDHDQ86WU2 507 aa17.02■□□□□ 0.32
SDF4-203ENST00000403997 TNS4Q8IZW8 715 aa17.02■□□□□ 0.32
SDF4-203ENST00000403997 CCDC85AQ96PX6 553 aaPredicted RBP17.02■□□□□ 0.32
SDF4-203ENST00000403997 ZNRF3Q9ULT6 936 aa17.02■□□□□ 0.32
SDF4-203ENST00000403997 CLEC11AQ9Y240 323 aa17.02■□□□□ 0.32
SDF4-203ENST00000403997 NEURL1BA8MQ27 555 aa17.01■□□□□ 0.31
SDF4-203ENST00000403997 LMOD1P29536 600 aaPredicted RBP17.01■□□□□ 0.31
SDF4-203ENST00000403997 KIAA2012Q0VF49 1180 aa17.01■□□□□ 0.31
SDF4-203ENST00000403997 CDHR2Q9BYE9 1310 aa17■□□□□ 0.31
SDF4-203ENST00000403997 C6orf229H3BNL8 230 aa17■□□□□ 0.31
SDF4-203ENST00000403997 GPSM2P81274 684 aa17■□□□□ 0.31
SDF4-203ENST00000403997 PNMA8AQ86V59 439 aaPredicted RBP17■□□□□ 0.31
SDF4-203ENST00000403997 DNAAF4Q8WXU2 420 aa17■□□□□ 0.31
SDF4-203ENST00000403997 SCN4AP35499 1836 aa16.99■□□□□ 0.31
SDF4-203ENST00000403997 CXCL9Q07325 125 aa16.99■□□□□ 0.31
SDF4-203ENST00000403997 WASHC4Q2M389 1173 aa16.99■□□□□ 0.31
SDF4-203ENST00000403997 H7C1W4 665 aa16.98■□□□□ 0.31
SDF4-203ENST00000403997 RIMBP2O15034 1052 aa16.98■□□□□ 0.31
SDF4-203ENST00000403997 EPS15P42566 896 aa16.98■□□□□ 0.31
SDF4-203ENST00000403997 CTSWP56202 376 aa16.98■□□□□ 0.31
SDF4-203ENST00000403997 GCKRQ14397 625 aa16.98■□□□□ 0.31
SDF4-203ENST00000403997 UBE3BQ7Z3V4 1068 aa16.98■□□□□ 0.31
SDF4-203ENST00000403997 ANKRD18AQ8IVF6 992 aa16.98■□□□□ 0.31
SDF4-203ENST00000403997 POLLQ9UGP5 575 aa16.98■□□□□ 0.31
SDF4-203ENST00000403997 ZNF521Q96K83 1311 aa16.97■□□□□ 0.31
SDF4-203ENST00000403997 RAD17O75943 681 aa16.97■□□□□ 0.31
SDF4-203ENST00000403997 SCNN1DP51172 638 aa16.97■□□□□ 0.31
SDF4-203ENST00000403997 TNIP1Q15025 636 aa16.97■□□□□ 0.31
SDF4-203ENST00000403997 CIAPIN1Q6FI81 312 aa16.97■□□□□ 0.31
SDF4-203ENST00000403997 LINS1Q8NG48 757 aa16.97■□□□□ 0.31
SDF4-203ENST00000403997 TTLL11Q8NHH1 800 aa16.97■□□□□ 0.31
SDF4-203ENST00000403997 KLRG1Q96E93 195 aa16.97■□□□□ 0.31
SDF4-203ENST00000403997 EYA3Q99504 573 aa16.97■□□□□ 0.31
SDF4-203ENST00000403997 ANKIB1Q9P2G1 1089 aa16.97■□□□□ 0.31
SDF4-203ENST00000403997 F6X3S4 739 aa16.96■□□□□ 0.31
SDF4-203ENST00000403997 TBC1D16Q8TBP0 767 aa16.96■□□□□ 0.31
SDF4-203ENST00000403997 CDC5LQ99459 802 aaKnown RBP16.96■□□□□ 0.31
SDF4-203ENST00000403997 COL4A1P02462 1669 aa16.95■□□□□ 0.3
SDF4-203ENST00000403997 YDJCA8MPS7 323 aa16.95■□□□□ 0.3
SDF4-203ENST00000403997 GPR101Q96P66 508 aaPredicted RBP16.95■□□□□ 0.3
SDF4-203ENST00000403997 BCL2L13Q9BXK5 485 aa16.95■□□□□ 0.3
SDF4-203ENST00000403997 ZC3H12CQ9C0D7 883 aaKnown RBP16.95■□□□□ 0.3
SDF4-203ENST00000403997 GREM2Q9H772 168 aa16.95■□□□□ 0.3
SDF4-203ENST00000403997 DBNDD1Q9H9R9 158 aa16.95■□□□□ 0.3
SDF4-203ENST00000403997 GPRC5DQ9NZD1 345 aa16.95■□□□□ 0.3
SDF4-203ENST00000403997 GGA1Q9UJY5 639 aa16.95■□□□□ 0.3
SDF4-203ENST00000403997 CACNA1FO60840 1977 aa16.95■□□□□ 0.3
SDF4-203ENST00000403997 G3V3G9 751 aa16.94■□□□□ 0.3
SDF4-203ENST00000403997 CCER2I3L3R5 266 aa16.94■□□□□ 0.3
SDF4-203ENST00000403997 UFL1O94874 794 aa16.94■□□□□ 0.3
SDF4-203ENST00000403997 GMPSP49915 693 aaPredicted RBP16.94■□□□□ 0.3
SDF4-203ENST00000403997 DOK7Q18PE1 504 aa16.94■□□□□ 0.3
SDF4-203ENST00000403997 DCAF8Q5TAQ9 597 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms