RNA–Protein interactions for RNA: ENST00000400907.6

RERE-203, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 5 BASIC

Gene RERE, Length 2,973 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-203ENST00000400907 PARP4Q9UKK3 1724 aaKnown RBP9.55□□□□□ -0.88
RERE-203ENST00000400907 NBPF26B4DH59 902 aa9.55□□□□□ -0.88
RERE-203ENST00000400907 ONECUT3O60422 494 aaPredicted RBP9.55□□□□□ -0.88
RERE-203ENST00000400907 HOXB7P09629 217 aa9.55□□□□□ -0.88
RERE-203ENST00000400907 PDIA6Q15084 440 aa9.55□□□□□ -0.88
RERE-203ENST00000400907 NBPF14Q5TI25 921 aa9.55□□□□□ -0.88
RERE-203ENST00000400907 NBPF10Q6P3W6 841 aaKnown RBP9.55□□□□□ -0.88
RERE-203ENST00000400907 NBPF15Q8N660 670 aa9.55□□□□□ -0.88
RERE-203ENST00000400907 TSPY26PQ9H489 355 aa9.55□□□□□ -0.88
RERE-203ENST00000400907 ZBTB3Q9H5J0 574 aa9.55□□□□□ -0.88
RERE-203ENST00000400907 DDX21Q9NR30 783 aaKnown RBP eCLIP9.55□□□□□ -0.88
RERE-203ENST00000400907 MAP3K2Q9Y2U5 619 aa9.55□□□□□ -0.88
RERE-203ENST00000400907 BCL9O00512 1426 aa9.55□□□□□ -0.88
RERE-203ENST00000400907 RGS12O14924 1447 aa9.55□□□□□ -0.88
RERE-203ENST00000400907 TRIM6-TRIM34B2RNG4 842 aa9.54□□□□□ -0.88
RERE-203ENST00000400907 ST18O60284 1047 aa9.54□□□□□ -0.88
RERE-203ENST00000400907 STARD3NLO95772 234 aa9.54□□□□□ -0.88
RERE-203ENST00000400907 PIBF1Q8WXW3 757 aa9.54□□□□□ -0.88
RERE-203ENST00000400907 USP25Q9UHP3 1055 aa9.54□□□□□ -0.88
RERE-203ENST00000400907 TTLL7Q6ZT98 887 aa9.54□□□□□ -0.88
RERE-203ENST00000400907 BCL11BQ9C0K0 894 aaPredicted RBP9.54□□□□□ -0.88
RERE-203ENST00000400907 TCHHQ07283 1943 aa9.54□□□□□ -0.88
RERE-203ENST00000400907 ATP5J2-PTCD1G3V325 749 aa9.54□□□□□ -0.88
RERE-203ENST00000400907 GADD45BO75293 160 aaPredicted RBP9.54□□□□□ -0.88
RERE-203ENST00000400907 SDSP20132 328 aa9.54□□□□□ -0.88
RERE-203ENST00000400907 GTF2F1P35269 517 aaKnown RBP eCLIP9.54□□□□□ -0.882e-9■■■■■ 42.3
RERE-203ENST00000400907 CWF19L2Q2TBE0 894 aaKnown RBP9.54□□□□□ -0.88
RERE-203ENST00000400907 PRIMPOLQ96LW4 560 aa9.54□□□□□ -0.88
RERE-203ENST00000400907 BCL2L12Q9HB09 334 aa9.54□□□□□ -0.88
RERE-203ENST00000400907 HYPKQ9NX55 129 aa9.54□□□□□ -0.88
RERE-203ENST00000400907 TBC1D2BQ9UPU7 963 aa9.54□□□□□ -0.88
RERE-203ENST00000400907 ZBTB1Q9Y2K1 713 aa9.54□□□□□ -0.88
RERE-203ENST00000400907 NWD2Q9ULI1 1742 aa9.53□□□□□ -0.88
RERE-203ENST00000400907 PALLDQ8WX93 1383 aa9.53□□□□□ -0.88
RERE-203ENST00000400907 PKD1L3Q7Z443 1732 aa9.53□□□□□ -0.88
RERE-203ENST00000400907 ITPK1Q13572 414 aa9.53□□□□□ -0.88
RERE-203ENST00000400907 IL1RAPL2Q9NP60 686 aa9.53□□□□□ -0.88
RERE-203ENST00000400907 KIF3AQ9Y496 699 aa9.53□□□□□ -0.88
RERE-203ENST00000400907 GLI3P10071 1580 aa9.53□□□□□ -0.88
RERE-203ENST00000400907 MBD3O95983 291 aa9.53□□□□□ -0.88
RERE-203ENST00000400907 HMGN5P82970 282 aaKnown RBP9.53□□□□□ -0.88
RERE-203ENST00000400907 INTS3Q68E01 1043 aaKnown RBP9.53□□□□□ -0.88
RERE-203ENST00000400907 FAM196AQ6ZSG2 479 aa9.53□□□□□ -0.88
RERE-203ENST00000400907 ANKRD13DQ6ZTN6 518 aa9.53□□□□□ -0.88
RERE-203ENST00000400907 DNAAF4Q8WXU2 420 aa9.53□□□□□ -0.88
RERE-203ENST00000400907 PLEKHG2Q9H7P9 1386 aa9.53□□□□□ -0.88
RERE-203ENST00000400907 TMX3Q96JJ7 454 aa9.52□□□□□ -0.88
RERE-203ENST00000400907 GTPBP4Q9BZE4 634 aaKnown RBP9.52□□□□□ -0.88
RERE-203ENST00000400907 KDM3BQ7LBC6 1761 aa9.52□□□□□ -0.89
RERE-203ENST00000400907 DDX58O95786 925 aaKnown RBP9.52□□□□□ -0.89
RERE-203ENST00000400907 U2AF2P26368 475 aaKnown RBP eCLIP9.52□□□□□ -0.892e-7■■□□□ 13
RERE-203ENST00000400907 MYD88Q99836 296 aa9.52□□□□□ -0.89
RERE-203ENST00000400907 CCNL1Q9UK58 526 aaPredicted RBP9.52□□□□□ -0.89
RERE-203ENST00000400907 BRD1O95696 1058 aa9.51□□□□□ -0.89
RERE-203ENST00000400907 CYP19A1P11511 503 aaPredicted RBP9.51□□□□□ -0.89
RERE-203ENST00000400907 NEK4P51957 841 aa9.51□□□□□ -0.89
RERE-203ENST00000400907 SMARCC1Q92922 1105 aaPredicted RBP9.51□□□□□ -0.89
RERE-203ENST00000400907 SCN11AQ9UI33 1791 aa9.51□□□□□ -0.89
RERE-203ENST00000400907 KIF20AO95235 890 aa9.51□□□□□ -0.89
RERE-203ENST00000400907 ADCY5O95622 1261 aa9.51□□□□□ -0.89
RERE-203ENST00000400907 CRKLP46109 303 aaKnown RBP9.51□□□□□ -0.89
RERE-203ENST00000400907 KSR2Q6VAB6 950 aa9.51□□□□□ -0.89
RERE-203ENST00000400907 TEX13AQ9BXU3 409 aaPredicted RBP9.51□□□□□ -0.89
RERE-203ENST00000400907 UPF3BQ9BZI7 483 aaKnown RBP9.51□□□□□ -0.89
RERE-203ENST00000400907 SRCIN1Q9C0H9 1055 aa9.51□□□□□ -0.89
RERE-203ENST00000400907 DCTPP1Q9H773 170 aa9.51□□□□□ -0.89
RERE-203ENST00000400907 APBA3O96018 575 aa9.51□□□□□ -0.89
RERE-203ENST00000400907 CEP85Q6P2H3 762 aa9.51□□□□□ -0.89
RERE-203ENST00000400907 C9orf78Q9NZ63 289 aaPredicted RBP9.51□□□□□ -0.89
RERE-203ENST00000400907 PXDNLA1KZ92 1463 aa9.5□□□□□ -0.89
RERE-203ENST00000400907 PHF14O94880 888 aa9.5□□□□□ -0.89
RERE-203ENST00000400907 GTF2E1P29083 439 aaPredicted RBP9.5□□□□□ -0.89
RERE-203ENST00000400907 PDCL2Q8N4E4 241 aa9.5□□□□□ -0.89
RERE-203ENST00000400907 ZMYND10O75800 440 aa9.5□□□□□ -0.89
RERE-203ENST00000400907 HCLS1P14317 486 aaPredicted RBP9.5□□□□□ -0.89
RERE-203ENST00000400907 CDK11BP21127 795 aaKnown RBP9.5□□□□□ -0.89
RERE-203ENST00000400907 GPTP24298 496 aa9.5□□□□□ -0.89
RERE-203ENST00000400907 NEXNQ0ZGT2 675 aa9.5□□□□□ -0.89
RERE-203ENST00000400907 ANO2Q9NQ90 1003 aa9.5□□□□□ -0.89
RERE-203ENST00000400907 SHANK3Q9BYB0 1731 aa9.49□□□□□ -0.89
RERE-203ENST00000400907 LETM1O95202 739 aaPredicted RBP9.49□□□□□ -0.89
RERE-203ENST00000400907 NBPF7P0C2Y1 421 aaPredicted RBP9.49□□□□□ -0.89
RERE-203ENST00000400907 CCT4P50991 539 aaKnown RBP9.49□□□□□ -0.89
RERE-203ENST00000400907 NUTM1Q86Y26 1132 aa9.49□□□□□ -0.89
RERE-203ENST00000400907 SPTLC3Q9NUV7 552 aa9.49□□□□□ -0.89
RERE-203ENST00000400907 MRC1P22897 1456 aa9.49□□□□□ -0.89
RERE-203ENST00000400907 ATP10DQ9P241 1426 aa9.49□□□□□ -0.89
RERE-203ENST00000400907 RIOK3O14730 519 aaKnown RBP9.49□□□□□ -0.89
RERE-203ENST00000400907 USP48Q86UV5 1035 aa9.49□□□□□ -0.89
RERE-203ENST00000400907 ANKRD44Q8N8A2 993 aa9.49□□□□□ -0.89
RERE-203ENST00000400907 LINC00116Q8NCU8 138 aa9.49□□□□□ -0.89
RERE-203ENST00000400907 CCDC87Q9NVE4 849 aa9.49□□□□□ -0.89
RERE-203ENST00000400907 ADAMTS7Q9UKP4 1686 aa9.49□□□□□ -0.89
RERE-203ENST00000400907 ADCY9O60503 1353 aa9.49□□□□□ -0.89
RERE-203ENST00000400907 SIPA1L3O60292 1781 aaPredicted RBP9.48□□□□□ -0.89
RERE-203ENST00000400907 BEND3Q5T5X7 828 aa9.48□□□□□ -0.89
RERE-203ENST00000400907 KIF6Q6ZMV9 814 aa9.48□□□□□ -0.89
RERE-203ENST00000400907 RPAP2Q8IXW5 612 aaPredicted RBP9.48□□□□□ -0.89
RERE-203ENST00000400907 KDM4CQ9H3R0 1056 aa9.48□□□□□ -0.89
RERE-203ENST00000400907 PYCARDQ9ULZ3 195 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms