RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 MEIS3Q99687 375 aa21.87■■□□□ 1.09
CSNK1D-204ENST00000398519 FOXO4P98177 505 aa21.86■■□□□ 1.09
CSNK1D-204ENST00000398519 EPHA10Q5JZY3 1008 aa21.86■■□□□ 1.09
CSNK1D-204ENST00000398519 ITPRIPQ8IWB1 547 aa21.86■■□□□ 1.09
CSNK1D-204ENST00000398519 CACNA1SQ13698 1873 aa21.85■■□□□ 1.09
CSNK1D-204ENST00000398519 TTLL11Q8NHH1 800 aa21.85■■□□□ 1.09
CSNK1D-204ENST00000398519 COL4A1P02462 1669 aa21.84■■□□□ 1.09
CSNK1D-204ENST00000398519 PDE3AQ14432 1141 aa21.84■■□□□ 1.09
CSNK1D-204ENST00000398519 DALRD3Q5D0E6 543 aaKnown RBP21.84■■□□□ 1.09
CSNK1D-204ENST00000398519 TTLL6Q8N841 843 aa21.84■■□□□ 1.09
CSNK1D-204ENST00000398519 CNKSR1Q969H4 720 aa21.84■■□□□ 1.09
CSNK1D-204ENST00000398519 RBM17Q96I25 401 aaKnown RBP21.84■■□□□ 1.09
CSNK1D-204ENST00000398519 CCDC85AQ96PX6 553 aaPredicted RBP21.84■■□□□ 1.09
CSNK1D-204ENST00000398519 CSF1RP07333 972 aa21.83■■□□□ 1.09
CSNK1D-204ENST00000398519 UBTFL1P0CB47 393 aaPredicted RBP21.83■■□□□ 1.09
CSNK1D-204ENST00000398519 CCDC152Q4G0S7 254 aa21.83■■□□□ 1.09
CSNK1D-204ENST00000398519 CRAMP1Q96RY5 1269 aa21.83■■□□□ 1.09
CSNK1D-204ENST00000398519 BCS1LQ9Y276 419 aa21.83■■□□□ 1.09
CSNK1D-204ENST00000398519 SLX4Q8IY92 1834 aa21.83■■□□□ 1.09
CSNK1D-204ENST00000398519 TAF1P21675 1872 aa21.83■■□□□ 1.08
CSNK1D-204ENST00000398519 YBX3P16989 372 aaKnown RBP eCLIP21.82■■□□□ 1.082e-6■■■□□ 15.1
CSNK1D-204ENST00000398519 ALDH1B1P30837 517 aa21.82■■□□□ 1.08
CSNK1D-204ENST00000398519 PRPF40BQ6NWY9 871 aaKnown RBP21.82■■□□□ 1.08
CSNK1D-204ENST00000398519 DDX46Q7L014 1031 aaKnown RBP21.82■■□□□ 1.08
CSNK1D-204ENST00000398519 MVPQ14764 893 aaKnown RBP21.82■■□□□ 1.08
CSNK1D-204ENST00000398519 PELP1Q8IZL8 1130 aaKnown RBP21.82■■□□□ 1.08
CSNK1D-204ENST00000398519 BICC1Q9H694 974 aaKnown RBP21.82■■□□□ 1.08
CSNK1D-204ENST00000398519 GREM2Q9H772 168 aa21.82■■□□□ 1.08
CSNK1D-204ENST00000398519 SEC31BQ9NQW1 1179 aa21.82■■□□□ 1.08
CSNK1D-204ENST00000398519 COG6Q9Y2V7 657 aa21.82■■□□□ 1.08
CSNK1D-204ENST00000398519 RTL9Q8NET4 1388 aa21.81■■□□□ 1.08
CSNK1D-204ENST00000398519 ARFGEF1Q9Y6D6 1849 aa21.81■■□□□ 1.08
CSNK1D-204ENST00000398519 GNAI3P08754 354 aa21.81■■□□□ 1.08
CSNK1D-204ENST00000398519 FAM161AQ3B820 660 aa21.81■■□□□ 1.08
CSNK1D-204ENST00000398519 ZBTB7BO15156 539 aaPredicted RBP21.8■■□□□ 1.08
CSNK1D-204ENST00000398519 GRAPQ13588 217 aa21.8■■□□□ 1.08
CSNK1D-204ENST00000398519 RABL6Q3YEC7 729 aaPredicted RBP21.8■■□□□ 1.08
CSNK1D-204ENST00000398519 LMBR1LQ6UX01 489 aa21.8■■□□□ 1.08
CSNK1D-204ENST00000398519 ANKRD44Q8N8A2 993 aa21.8■■□□□ 1.08
CSNK1D-204ENST00000398519 GRAPLQ8TC17 118 aaPredicted RBP21.8■■□□□ 1.08
CSNK1D-204ENST00000398519 CELF1Q92879 486 aaKnown RBP21.79■■□□□ 1.08
CSNK1D-204ENST00000398519 SUPT16HQ9Y5B9 1047 aaKnown RBP21.79■■□□□ 1.08
CSNK1D-204ENST00000398519 LRRFIP2Q9Y608 721 aaKnown RBP21.79■■□□□ 1.08
CSNK1D-204ENST00000398519 GPR162Q16538 588 aa21.78■■□□□ 1.08
CSNK1D-204ENST00000398519 SLC51AQ86UW1 340 aa21.78■■□□□ 1.08
CSNK1D-204ENST00000398519 C7orf43Q8WVR3 580 aa21.78■■□□□ 1.08
CSNK1D-204ENST00000398519 CHMP3Q9Y3E7 222 aa21.78■■□□□ 1.08
CSNK1D-204ENST00000398519 PPEF1O14829 653 aaPredicted RBP21.77■■□□□ 1.08
CSNK1D-204ENST00000398519 ITGA6P23229 1130 aa21.77■■□□□ 1.08
CSNK1D-204ENST00000398519 ZNF219Q9P2Y4 722 aaPredicted RBP21.77■■□□□ 1.08
CSNK1D-204ENST00000398519 DDX19BQ9UMR2 479 aa21.77■■□□□ 1.08
CSNK1D-204ENST00000398519 HDAC5Q9UQL6 1122 aa21.77■■□□□ 1.08
CSNK1D-204ENST00000398519 C21orf2O43822 256 aa21.76■■□□□ 1.07
CSNK1D-204ENST00000398519 BBOX1O75936 387 aa21.76■■□□□ 1.07
CSNK1D-204ENST00000398519 GNAI2P04899 355 aa21.76■■□□□ 1.07
CSNK1D-204ENST00000398519 RPS8P62241 208 aaKnown RBP21.75■■□□□ 1.07
CSNK1D-204ENST00000398519 OLFM4Q6UX06 510 aa21.75■■□□□ 1.07
CSNK1D-204ENST00000398519 SPEF2Q9C093 1822 aa21.75■■□□□ 1.07
CSNK1D-204ENST00000398519 LRRC37AA6NMS7 1700 aa21.74■■□□□ 1.07
CSNK1D-204ENST00000398519 IFIT5Q13325 482 aaKnown RBP21.74■■□□□ 1.07
CSNK1D-204ENST00000398519 CDC5LQ99459 802 aaKnown RBP21.74■■□□□ 1.07
CSNK1D-204ENST00000398519 ANKRD18BA2A2Z9 1011 aa21.74■■□□□ 1.07
CSNK1D-204ENST00000398519 CCDC57Q2TAC2 916 aa21.74■■□□□ 1.07
CSNK1D-204ENST00000398519 ANKRD18AQ8IVF6 992 aa21.74■■□□□ 1.07
CSNK1D-204ENST00000398519 C1orf115Q9H7X2 142 aa21.74■■□□□ 1.07
CSNK1D-204ENST00000398519 ATP6V0A2Q9Y487 856 aa21.74■■□□□ 1.07
CSNK1D-204ENST00000398519 SNED1Q8TER0 1413 aa21.73■■□□□ 1.07
CSNK1D-204ENST00000398519 TMC4Q7Z404 712 aa21.72■■□□□ 1.07
CSNK1D-204ENST00000398519 ZBTB40Q9NUA8 1239 aa21.72■■□□□ 1.07
CSNK1D-204ENST00000398519 SP8Q8IXZ3 490 aa21.71■■□□□ 1.07
CSNK1D-204ENST00000398519 GRIN3BO60391 1043 aa21.7■■□□□ 1.06
CSNK1D-204ENST00000398519 MTX1Q13505 466 aa21.7■■□□□ 1.06
CSNK1D-204ENST00000398519 CCDC93Q567U6 631 aa21.7■■□□□ 1.06
CSNK1D-204ENST00000398519 SOGA3Q5TF21 947 aa21.7■■□□□ 1.06
CSNK1D-204ENST00000398519 ZNF594Q96JF6 807 aaPredicted RBP21.7■■□□□ 1.06
CSNK1D-204ENST00000398519 FER1L6Q2WGJ9 1857 aa21.7■■□□□ 1.06
CSNK1D-204ENST00000398519 DCAF8L1A6NGE4 600 aa21.7■■□□□ 1.06
CSNK1D-204ENST00000398519 IGHMBP2P38935 993 aaKnown RBP21.7■■□□□ 1.06
CSNK1D-204ENST00000398519 RFX5P48382 616 aaPredicted RBP21.7■■□□□ 1.06
CSNK1D-204ENST00000398519 CRBNQ96SW2 442 aa21.7■■□□□ 1.06
CSNK1D-204ENST00000398519 BSDC1Q9NW68 430 aaPredicted RBP21.7■■□□□ 1.06
CSNK1D-204ENST00000398519 CC2D2BQ6DHV5 1058 aa21.69■■□□□ 1.06
CSNK1D-204ENST00000398519 ARHGAP27Q6ZUM4 889 aa21.69■■□□□ 1.06
CSNK1D-204ENST00000398519 CHMP4BQ9H444 224 aaKnown RBP21.69■■□□□ 1.06
CSNK1D-204ENST00000398519 NFKBIEO00221 500 aa21.68■■□□□ 1.06
CSNK1D-204ENST00000398519 TAF7LQ5H9L4 462 aa21.68■■□□□ 1.06
CSNK1D-204ENST00000398519 KLHDC4Q8TBB5 520 aa21.68■■□□□ 1.06
CSNK1D-204ENST00000398519 MPHOSPH8Q99549 860 aa21.68■■□□□ 1.06
CSNK1D-204ENST00000398519 LTBP1Q14766 1721 aa21.67■■□□□ 1.06
CSNK1D-204ENST00000398519 SRGAP3O43295 1099 aa21.67■■□□□ 1.06
CSNK1D-204ENST00000398519 TMX4Q9H1E5 349 aaPredicted RBP21.67■■□□□ 1.06
CSNK1D-204ENST00000398519 PNMA6EA0A0J9YXQ4 647 aa21.66■■□□□ 1.06
CSNK1D-204ENST00000398519 RTKN2Q8IZC4 609 aa21.66■■□□□ 1.06
CSNK1D-204ENST00000398519 DUOX1Q9NRD9 1551 aa21.66■■□□□ 1.06
CSNK1D-204ENST00000398519 CENPBP07199 599 aaPredicted RBP21.65■■□□□ 1.06
CSNK1D-204ENST00000398519 RASSF7Q02833 373 aa21.65■■□□□ 1.06
CSNK1D-204ENST00000398519 PTPN12Q05209 780 aaKnown RBP21.65■■□□□ 1.06
CSNK1D-204ENST00000398519 CEP85Q6P2H3 762 aa21.65■■□□□ 1.06
CSNK1D-204ENST00000398519 LDHAL6AQ6ZMR3 332 aa21.65■■□□□ 1.06
CSNK1D-204ENST00000398519 MINPP1Q9UNW1 487 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms