RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 PDCL3Q9H2J4 239 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 CCDC192P0DO97 292 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 KRT10P13645 584 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 ALDH1B1P30837 517 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 IFIT5Q13325 482 aaKnown RBP3.14□□□□□ -1.91
CHD9-202ENST00000398510 GPATCH11Q8N954 259 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 CEP83Q9Y592 693 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 NWD1Q149M9 1564 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 YTHDC2Q9H6S0 1430 aaKnown RBP3.14□□□□□ -1.91
CHD9-202ENST00000398510 PPP1R2P3Q6NXS1 205 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 MICAL1Q8TDZ2 1067 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 KIF13AQ9H1H9 1805 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 M0QZ92 97 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 ATP2A1O14983 1001 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 PFDN6O15212 129 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 KIAA0754O94854 1291 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 RFX1P22670 979 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 GNAQP50148 359 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 PPP2R5BQ15173 497 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 DDX46Q7L014 1031 aaKnown RBP3.14□□□□□ -1.91
CHD9-202ENST00000398510 DAAM2Q86T65 1068 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 ZSCAN31Q96LW9 406 aaPredicted RBP3.14□□□□□ -1.91
CHD9-202ENST00000398510 ANKRD2Q9GZV1 360 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 STRN4Q9NRL3 753 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 PIK3R4Q99570 1358 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 TUBB4AP04350 444 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 SRGAP1Q7Z6B7 1085 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 CRNKL1Q9BZJ0 848 aaKnown RBP3.14□□□□□ -1.91
CHD9-202ENST00000398510 LRP2BPQ9P2M1 347 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 LMTK2Q8IWU2 1503 aa3.14□□□□□ -1.91
CHD9-202ENST00000398510 LUZP1Q86V48 1076 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 CTAGE1Q96RT6 745 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 FSD1Q9BTV5 496 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 DONSONQ9NYP3 566 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 RASAL2Q9UJF2 1139 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 MYO3AQ8NEV4 1616 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 NAIPQ13075 1403 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 ADGRL3Q9HAR2 1447 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 TCOF1Q13428 1488 aaKnown RBP3.13□□□□□ -1.91
CHD9-202ENST00000398510 RFC4P35249 363 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 RILPL2Q969X0 211 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 GOPCQ9HD26 462 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 ODF2LQ9ULJ1 636 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 IVNS1ABPQ9Y6Y0 642 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 IL16Q14005 1332 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 RTL9Q8NET4 1388 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 ADGRL2O95490 1459 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 RIPK4P57078 832 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 CREBRFQ8IUR6 639 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 CCDC102AQ96A19 550 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 NEUROD6Q96NK8 337 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 DDX23Q9BUQ8 820 aaKnown RBP3.13□□□□□ -1.91
CHD9-202ENST00000398510 PLA2R1Q13018 1463 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 AFAP1L2Q8N4X5 818 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 PRKAG2Q9UGJ0 569 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 CCDC61Q9Y6R9 512 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 CARMIL3Q8ND23 1372 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 EDC4Q6P2E9 1401 aaKnown RBP3.13□□□□□ -1.91
CHD9-202ENST00000398510 H0YCG3 227 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 HMOX1P09601 288 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 FKBP15Q5T1M5 1219 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 UTP14CQ5TAP6 766 aaKnown RBP3.13□□□□□ -1.91
CHD9-202ENST00000398510 CCDC77Q9BR77 488 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 BCL2L13Q9BXK5 485 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 IKBKGQ9Y6K9 419 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 ERICH4A6NGS2 130 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 CTAGE5O15320 804 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 SH3BGRP55822 239 aaPredicted RBP3.13□□□□□ -1.91
CHD9-202ENST00000398510 KIF5AQ12840 1032 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 TAF12Q16514 161 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 MCF2L2Q86YR7 1114 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 LZTS2Q9BRK4 669 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 NAA15Q9BXJ9 866 aaKnown RBP3.13□□□□□ -1.91
CHD9-202ENST00000398510 SH2B1Q9NRF2 756 aaPredicted RBP3.13□□□□□ -1.91
CHD9-202ENST00000398510 BABAM1Q9NWV8 329 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 PAXBP1Q9Y5B6 917 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 KMT5BQ4FZB7 885 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 MUM1L1Q5H9M0 696 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 ODR4Q5SWX8 454 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 LEKR1Q6ZMV7 388 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 CTCFLQ8NI51 663 aaPredicted RBP3.13□□□□□ -1.91
CHD9-202ENST00000398510 TBC1D5Q92609 795 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 PICK1Q9NRD5 415 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 NCAPD2Q15021 1401 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 EXOC5O00471 708 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 FYB1O15117 783 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 ZFYP08048 801 aaPredicted RBP3.13□□□□□ -1.91
CHD9-202ENST00000398510 C6orf163Q5TEZ5 329 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 TTC14Q96N46 770 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 MCM10Q7L590 875 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 WDR63Q8IWG1 891 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 RAB3IL1Q8TBN0 382 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 CSRNP2Q9H175 543 aa3.13□□□□□ -1.91
CHD9-202ENST00000398510 MICAL3Q7RTP6 2002 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 H0YHG0 523 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 ZWINTO95229 277 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 RPLP2P05387 115 aaKnown RBP3.12□□□□□ -1.91
CHD9-202ENST00000398510 SMTNP53814 917 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 PDE3AQ14432 1141 aa3.12□□□□□ -1.91
CHD9-202ENST00000398510 SPA17Q15506 151 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms