RNA–Protein interactions for RNA: ENST00000397838.7

CEP290-202, Transcript of centrosomal protein 290, humanhuman

TSL 5 BASIC

Gene CEP290, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-202ENST00000397838 MINDY4BA8MYZ0 360 aa8.64□□□□□ -1.03
CEP290-202ENST00000397838 K7ELQ4 463 aaPredicted RBP8.64□□□□□ -1.03
CEP290-202ENST00000397838 RAB11FIP3O75154 756 aa8.64□□□□□ -1.03
CEP290-202ENST00000397838 XKR5Q6UX68 686 aa8.64□□□□□ -1.03
CEP290-202ENST00000397838 RASGRP4Q8TDF6 673 aa8.64□□□□□ -1.03
CEP290-202ENST00000397838 SPON2Q9BUD6 331 aa8.64□□□□□ -1.03
CEP290-202ENST00000397838 NASPP49321 788 aaPredicted RBP8.64□□□□□ -1.03
CEP290-202ENST00000397838 BTLAQ7Z6A9 289 aa8.64□□□□□ -1.03
CEP290-202ENST00000397838 J3QL48 77 aa8.63□□□□□ -1.03
CEP290-202ENST00000397838 GADD45BO75293 160 aaPredicted RBP8.63□□□□□ -1.03
CEP290-202ENST00000397838 TIMP2P16035 220 aa8.63□□□□□ -1.03
CEP290-202ENST00000397838 WDR4P57081 412 aaKnown RBP8.63□□□□□ -1.03
CEP290-202ENST00000397838 SLC27A3Q5K4L6 730 aa8.63□□□□□ -1.03
CEP290-202ENST00000397838 EAF1Q96JC9 268 aaPredicted RBP8.63□□□□□ -1.03
CEP290-202ENST00000397838 KANSL2Q9H9L4 492 aa8.63□□□□□ -1.03
CEP290-202ENST00000397838 CYP2E1P05181 493 aaPredicted RBP8.63□□□□□ -1.03
CEP290-202ENST00000397838 GGCXP38435 758 aa8.62□□□□□ -1.03
CEP290-202ENST00000397838 CTC1Q2NKJ3 1217 aa8.62□□□□□ -1.03
CEP290-202ENST00000397838 PDE12Q6L8Q7 609 aaKnown RBP8.62□□□□□ -1.03
CEP290-202ENST00000397838 LRRC69Q6ZNQ3 347 aa8.62□□□□□ -1.03
CEP290-202ENST00000397838 TRIM52Q96A61 297 aa8.62□□□□□ -1.03
CEP290-202ENST00000397838 GINM1Q9NU53 330 aa8.62□□□□□ -1.03
CEP290-202ENST00000397838 KANSL3Q9P2N6 904 aa8.62□□□□□ -1.03
CEP290-202ENST00000397838 TTF2Q9UNY4 1162 aaKnown RBP8.62□□□□□ -1.03
CEP290-202ENST00000397838 EFR3BQ9Y2G0 817 aa8.62□□□□□ -1.03
CEP290-202ENST00000397838 NEFLP07196 543 aa8.62□□□□□ -1.03
CEP290-202ENST00000397838 ARSDP51689 593 aa8.62□□□□□ -1.03
CEP290-202ENST00000397838 MAP3K11Q16584 847 aa8.62□□□□□ -1.03
CEP290-202ENST00000397838 PEAR1Q5VY43 1037 aaPredicted RBP8.62□□□□□ -1.03
CEP290-202ENST00000397838 TLR6Q9Y2C9 796 aa8.62□□□□□ -1.03
CEP290-202ENST00000397838 KIAA0825Q8IV33 1275 aa8.61□□□□□ -1.03
CEP290-202ENST00000397838 FAM13BQ9NYF5 915 aa8.61□□□□□ -1.03
CEP290-202ENST00000397838 WASF2Q9Y6W5 498 aa8.61□□□□□ -1.03
CEP290-202ENST00000397838 CTSOP43234 321 aaPredicted RBP8.61□□□□□ -1.03
CEP290-202ENST00000397838 GALNT12Q8IXK2 581 aa8.61□□□□□ -1.03
CEP290-202ENST00000397838 GIPC1O14908 333 aa8.6□□□□□ -1.03
CEP290-202ENST00000397838 RPLP1P05386 114 aaKnown RBP8.6□□□□□ -1.03
CEP290-202ENST00000397838 FAM160A1Q05DH4 1040 aa8.6□□□□□ -1.03
CEP290-202ENST00000397838 FOXC1Q12948 553 aa8.6□□□□□ -1.03
CEP290-202ENST00000397838 IER5Q5VY09 327 aa8.6□□□□□ -1.03
CEP290-202ENST00000397838 FBXL19Q6PCT2 694 aa8.6□□□□□ -1.03
CEP290-202ENST00000397838 HNRNPLLQ8WVV9 542 aaKnown RBP8.6□□□□□ -1.03
CEP290-202ENST00000397838 FAM221BA6H8Z2 402 aa8.6□□□□□ -1.03
CEP290-202ENST00000397838 SSBP05455 408 aaKnown RBP eCLIP8.6□□□□□ -1.03
CEP290-202ENST00000397838 NBPF1Q3BBV0 1214 aa8.6□□□□□ -1.03
CEP290-202ENST00000397838 GNASQ5JWF2 1037 aa8.6□□□□□ -1.03
CEP290-202ENST00000397838 BICDL1Q6ZP65 573 aa8.6□□□□□ -1.03
CEP290-202ENST00000397838 CCDC85CA6NKD9 419 aa8.59□□□□□ -1.03
CEP290-202ENST00000397838 POU4F2Q12837 409 aa8.59□□□□□ -1.03
CEP290-202ENST00000397838 CCDC85BQ15834 202 aaPredicted RBP8.59□□□□□ -1.03
CEP290-202ENST00000397838 ANKS3Q6ZW76 656 aa8.59□□□□□ -1.03
CEP290-202ENST00000397838 CKAP2LQ8IYA6 745 aa8.59□□□□□ -1.03
CEP290-202ENST00000397838 MICAL1Q8TDZ2 1067 aa8.59□□□□□ -1.03
CEP290-202ENST00000397838 UBP1Q9NZI7 540 aa8.59□□□□□ -1.03
CEP290-202ENST00000397838 PKD2L1Q9P0L9 805 aa8.59□□□□□ -1.03
CEP290-202ENST00000397838 XYLBO75191 536 aa8.59□□□□□ -1.03
CEP290-202ENST00000397838 CRKP46108 304 aa8.59□□□□□ -1.03
CEP290-202ENST00000397838 TYRO3Q06418 890 aa8.59□□□□□ -1.03
CEP290-202ENST00000397838 RNPC3Q96LT9 517 aaKnown RBP8.59□□□□□ -1.03
CEP290-202ENST00000397838 SUV39H2Q9H5I1 410 aa8.59□□□□□ -1.03
CEP290-202ENST00000397838 GBP2P32456 591 aaPredicted RBP8.58□□□□□ -1.04
CEP290-202ENST00000397838 FCGRTP55899 365 aa8.58□□□□□ -1.04
CEP290-202ENST00000397838 PTPROQ16827 1216 aa8.58□□□□□ -1.04
CEP290-202ENST00000397838 PRICKLE2Q7Z3G6 844 aa8.58□□□□□ -1.04
CEP290-202ENST00000397838 SRCIN1Q9C0H9 1055 aa8.58□□□□□ -1.04
CEP290-202ENST00000397838 KLF4O43474 513 aa8.58□□□□□ -1.04
CEP290-202ENST00000397838 MARCH6O60337 910 aa8.58□□□□□ -1.04
CEP290-202ENST00000397838 ACPPP15309 386 aa8.58□□□□□ -1.04
CEP290-202ENST00000397838 EIF4A3P38919 411 aaKnown RBP8.58□□□□□ -1.04
CEP290-202ENST00000397838 SLC19A1P41440 591 aa8.58□□□□□ -1.04
CEP290-202ENST00000397838 VEGFBP49765 207 aa8.58□□□□□ -1.04
CEP290-202ENST00000397838 SOGA3Q5TF21 947 aa8.58□□□□□ -1.04
CEP290-202ENST00000397838 MEIOBQ8N635 442 aa8.58□□□□□ -1.04
CEP290-202ENST00000397838 ZNF296Q8WUU4 475 aaPredicted RBP8.58□□□□□ -1.04
CEP290-202ENST00000397838 ZIC5Q96T25 663 aa8.58□□□□□ -1.04
CEP290-202ENST00000397838 ABI2Q9NYB9 513 aaPredicted RBP8.58□□□□□ -1.04
CEP290-202ENST00000397838 ZDHHC3Q9NYG2 299 aa8.58□□□□□ -1.04
CEP290-202ENST00000397838 CCDC81Q6ZN84 652 aa8.57□□□□□ -1.04
CEP290-202ENST00000397838 MRFAP1L1Q96HT8 127 aa8.57□□□□□ -1.04
CEP290-202ENST00000397838 SRPK1Q96SB4 655 aaKnown RBP8.57□□□□□ -1.04
CEP290-202ENST00000397838 NOC4LQ9BVI4 516 aaKnown RBP8.57□□□□□ -1.04
CEP290-202ENST00000397838 A0A1W2PP55 124 aa8.56□□□□□ -1.04
CEP290-202ENST00000397838 XRCC5P13010 732 aaKnown RBP8.56□□□□□ -1.04
CEP290-202ENST00000397838 RASA3Q14644 834 aa8.56□□□□□ -1.04
CEP290-202ENST00000397838 ZCCHC2Q9C0B9 1178 aaKnown RBP8.56□□□□□ -1.04
CEP290-202ENST00000397838 SNTG2Q9NY99 539 aa8.56□□□□□ -1.04
CEP290-202ENST00000397838 KLHL42Q9P2K6 505 aa8.56□□□□□ -1.04
CEP290-202ENST00000397838 FNDC3AQ9Y2H6 1198 aaKnown RBP8.56□□□□□ -1.04
CEP290-202ENST00000397838 TRPA1O75762 1119 aa8.56□□□□□ -1.04
CEP290-202ENST00000397838 CELA3AP09093 270 aa8.56□□□□□ -1.04
CEP290-202ENST00000397838 GSTT1P30711 240 aa8.56□□□□□ -1.04
CEP290-202ENST00000397838 RNF144AP50876 292 aaPredicted RBP8.56□□□□□ -1.04
CEP290-202ENST00000397838 ARSJQ5FYB0 599 aaPredicted RBP8.56□□□□□ -1.04
CEP290-202ENST00000397838 SPRYD7Q5W111 196 aa8.56□□□□□ -1.04
CEP290-202ENST00000397838 KCNB2Q92953 911 aa8.56□□□□□ -1.04
CEP290-202ENST00000397838 SEC16BQ96JE7 1060 aa8.56□□□□□ -1.04
CEP290-202ENST00000397838 RHOVQ96L33 236 aa8.56□□□□□ -1.04
CEP290-202ENST00000397838 RSRP1Q9BUV0 290 aa8.56□□□□□ -1.04
CEP290-202ENST00000397838 ABCB6Q9NP58 842 aa8.56□□□□□ -1.04
CEP290-202ENST00000397838 SALL4Q9UJQ4 1053 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms